Mercurial > repos > petr-novak > various_galaxy_tools

diff gff2tabular.R @ 0:696e702ebf74 draft

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"planemo upload commit 0f6eca49bafc3c946189d793161a7f81d595e1a1-dirty"
author petr-novak
date Mon, 09 May 2022 08:26:30 +0000
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children 639c0edb7e64
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/gff2tabular.R	Mon May 09 08:26:30 2022 +0000
@@ -0,0 +1,6 @@
+#!/usr/bin/env Rscript
+library(rtracklayer)
+gff <- import(commandArgs(T)[1], format='GFF')
+tabular <- as.data.frame(gff)
+write.table(tabular, file = commandArgs(T)[2], quote=FALSE, sep="\t", row.names=FALSE)
+