annotate README.rst @ 0:cce6989ed423

new NIST wrapper demo tools
author pieter.lukasse@wur.nl
date Thu, 22 Jan 2015 16:14:57 +0100
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1 NIST-wrapper
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2 ============================================
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3
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4 Metabolomics tool that wraps the NIST nistms tools for matching measured spectra against
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5 library spectra.
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6
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7
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8 Copyright (c) 2015 by Pieter Lukasse, Plant Research International (PRI),
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9 Wageningen, The Netherlands. All rights reserved. See the license text below.
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10
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11 Galaxy wrappers and installation are available from the Galaxy Tool Shed at:
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12 http://toolshed.g2.bx.psu.edu/view/pieterlukasse/nist_wrapper
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13
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14 History
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15 =======
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17 ============== ======================================================================
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18 Date Changes
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19 -------------- ----------------------------------------------------------------------
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20 January 2015 * First test version
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22 ============== ======================================================================
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23
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24 Tool Versioning
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25 ===============
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26
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27 Tool will have versions of the form X.Y.Z. Versions
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28 differing only after the second decimal should be completely
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29 compatible with each other. Breaking changes should result in an
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30 increment of the number before and/or after the first decimal. All
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31 tools of version less than 1.0.0 should be considered beta.
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33
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34 Bug Reports & other questions
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35 =============================
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36
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37 For the time being issues can be reported via the contact form at:
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38 http://www.wageningenur.nl/en/Persons/PNJ-Pieter-Lukasse.htm
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39
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40 Developers, Contributions & Collaborations
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41 ==========================================
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42
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43 If you wish to join forces and collaborate on some of the
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44 tools do not hesitate to contact Pieter Lukasse via the contact form above.
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46
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47 License (Apache, Version 2.0)
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48 =============================
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49
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50 Copyright 2015 Pieter Lukasse, Plant Research International (PRI).
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51
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52 Licensed under the Apache License, Version 2.0 (the "License");
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53 you may not use this software except in compliance with the License.
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54 You may obtain a copy of the License at
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55
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56 http://www.apache.org/licenses/LICENSE-2.0
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57
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58 Unless required by applicable law or agreed to in writing, software
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59 distributed under the License is distributed on an "AS IS" BASIS,
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60 WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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61 See the License for the specific language governing permissions and
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62 limitations under the License.
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63
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64
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65 License for third party NIST tool/library
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66 ================================
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68
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69 NIST 08 MS Library (demo) and MS Search v2.0f:
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71 This package includes version 2.0f of the NIST Mass Spectral
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72 Search Program and a small subset of the NIST 08 MS Library.