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new NIST wrapper demo tools
author pieter.lukasse@wur.nl
date Thu, 22 Jan 2015 16:14:57 +0100
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1 NIST-wrapper
2 ============================================
3
4 Metabolomics tool that wraps the NIST nistms tools for matching measured spectra against
5 library spectra.
6
7
8 Copyright (c) 2015 by Pieter Lukasse, Plant Research International (PRI),
9 Wageningen, The Netherlands. All rights reserved. See the license text below.
10
11 Galaxy wrappers and installation are available from the Galaxy Tool Shed at:
12 http://toolshed.g2.bx.psu.edu/view/pieterlukasse/nist_wrapper
13
14 History
15 =======
16
17 ============== ======================================================================
18 Date Changes
19 -------------- ----------------------------------------------------------------------
20 January 2015 * First test version
21
22 ============== ======================================================================
23
24 Tool Versioning
25 ===============
26
27 Tool will have versions of the form X.Y.Z. Versions
28 differing only after the second decimal should be completely
29 compatible with each other. Breaking changes should result in an
30 increment of the number before and/or after the first decimal. All
31 tools of version less than 1.0.0 should be considered beta.
32
33
34 Bug Reports & other questions
35 =============================
36
37 For the time being issues can be reported via the contact form at:
38 http://www.wageningenur.nl/en/Persons/PNJ-Pieter-Lukasse.htm
39
40 Developers, Contributions & Collaborations
41 ==========================================
42
43 If you wish to join forces and collaborate on some of the
44 tools do not hesitate to contact Pieter Lukasse via the contact form above.
45
46
47 License (Apache, Version 2.0)
48 =============================
49
50 Copyright 2015 Pieter Lukasse, Plant Research International (PRI).
51
52 Licensed under the Apache License, Version 2.0 (the "License");
53 you may not use this software except in compliance with the License.
54 You may obtain a copy of the License at
55
56 http://www.apache.org/licenses/LICENSE-2.0
57
58 Unless required by applicable law or agreed to in writing, software
59 distributed under the License is distributed on an "AS IS" BASIS,
60 WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
61 See the License for the specific language governing permissions and
62 limitations under the License.
63
64
65 License for third party NIST tool/library
66 ================================
67
68
69 NIST 08 MS Library (demo) and MS Search v2.0f:
70
71 This package includes version 2.0f of the NIST Mass Spectral
72 Search Program and a small subset of the NIST 08 MS Library.