Mercurial > repos > pieterlukasse > prims_metabolomics
annotate rankfilter_text2tabular.xml @ 0:9d5f4f5f764b
Initial commit to toolshed
| author | pieter.lukasse@wur.nl |
|---|---|
| date | Thu, 16 Jan 2014 13:10:00 +0100 |
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| children |
| rev | line source |
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| 0 | 1 <tool id="NDIStext2tabular" name="NIST_UTIL- NIST text to tabular format" version="1.0.2"> |
| 2 <description>Convert NIST text to tabular format</description> | |
| 3 <command interpreter="python">rankfilter_GCMS/pdftotabular.py $input $output $output_err</command> | |
| 4 <inputs> | |
| 5 <param format="pdf" name="input" type="data" label="NIST identifications report (PDF)"/> | |
| 6 </inputs> | |
| 7 <outputs> | |
| 8 <data format="tabular" label="${tool.name} output on ${on_string}" name="output" /> | |
| 9 <data format="tabular" label="${tool.name} error log" name="output_err" /> | |
| 10 </outputs> | |
| 11 <help> | |
| 12 This tool converts NIST identification report output (PDF) to a tabular format needed for further use with the RIQC tools. | |
| 13 </help> | |
| 14 </tool> |