Mercurial > repos > pieterlukasse > prims_metabolomics

annotate rankfilter_text2tabular.xml @ 41:e67149fbff20

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small changes/improvements; new metams and xcms tools
author pieter.lukasse@wur.nl
date Thu, 06 Nov 2014 16:14:44 +0100
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children
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1 <tool id="NDIStext2tabular" name="NIST_UTIL- NIST text to tabular format" version="1.0.2">
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2 <description>Convert NIST text to tabular format</description>
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3 <command interpreter="python">rankfilter_GCMS/pdftotabular.py $input $output $output_err</command>
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4 <inputs>
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5 <param format="pdf" name="input" type="data" label="NIST identifications report (PDF)"/>
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6 </inputs>
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7 <outputs>
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8 <data format="tabular" label="${tool.name} output on ${on_string}" name="output" />
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9 <data format="tabular" label="${tool.name} error log" name="output_err" />
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10 </outputs>
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11 <help>
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12 This tool converts NIST identification report output (PDF) to a tabular format needed for further use with the RIQC tools.
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13 </help>
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14 </tool>