Mercurial > repos > pieterlukasse > prims_metabolomics2

annotate GCMS/readme.txt @ 15:05ff1c55db84

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fix for rankfilter, removed pfd read functional
author linda.bakker@wur.nl <linda.bakker@wur.nl>
date Fri, 20 Mar 2015 17:11:04 +0100
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1 ==Description==
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2 Galaxy tools for analyzing a PDF-result file generated by NIST-MSSearch by calculating ranks for
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3 each putative metabolite and matching with a Retention Index Database by CAS-number
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6 ==Dependencies==
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7 - Galaxy
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8 - pdftotext (part of the 'poppler-utils' package (Ubuntu and Debian))
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9 - Python (>= 2.6) with the following package(s):
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10 - numpy
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11 - R
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14 ==Installation==
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16 - Optionally run the included Python unittests to verify the dependencies:
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17 nosetests galaxy-dist/tools/GCMS
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21 ==License==
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23 Licensing info can be found at the /LICENSE_AND_README folder files located
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24 in the root of this (PRIMS-metabolomics) project.
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