Mercurial > repos > pieterlukasse > prims_metabolomics2
view GCMS/readme.txt @ 25:9f03c8587d6b draft default tip
MetExp msclust upload format changed from tabular to csv
author | linda-bakker |
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date | Fri, 24 Aug 2018 09:56:05 -0400 |
parents | 4393f982d18f |
children |
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==Description== Galaxy tools for analyzing a PDF-result file generated by NIST-MSSearch by calculating ranks for each putative metabolite and matching with a Retention Index Database by CAS-number ==Dependencies== - Galaxy - pdftotext (part of the 'poppler-utils' package (Ubuntu and Debian)) - Python (>= 2.6) with the following package(s): - numpy - R ==Installation== - Optionally run the included Python unittests to verify the dependencies: nosetests galaxy-dist/tools/GCMS ==License== Licensing info can be found at the /LICENSE_AND_README folder files located in the root of this (PRIMS-metabolomics) project.