Mercurial > repos > pieterlukasse > prims_metabolomics2

annotate metaMS/next.r @ 24:2ab40f9266e4 draft

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An update to the core of galaxy prevents the way the code is trying to write files. This patch fixes this.
author linda-bakker
date Tue, 20 Feb 2018 07:59:47 -0500
parents 4393f982d18f
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1 # next script, useful for plotting the CAMERA groups pseudo-spectra:
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2 plotPsSpectrum( LC$xset,320,maxlabel=10)
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3 320 is group id
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4 plotEICs( LC$xset,35,maxlabel=5)
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7 could use this for the items identified by "annotate" step.
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pieter.lukasse@wur.nl
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8 could also integrate this to getEIC tool (add option to give group list instead of m/z list)...but then rt and other options
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pieter.lukasse@wur.nl
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9 are also not so relevant...maybe a separate tool is more clear