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An update to the core of galaxy prevents the way the code is trying to write files. This patch fixes this.
author linda-bakker
date Tue, 20 Feb 2018 07:59:47 -0500
parents 4393f982d18f
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# next script, useful for plotting the CAMERA groups pseudo-spectra:
plotPsSpectrum( LC$xset,320,maxlabel=10) 
320 is group id
plotEICs( LC$xset,35,maxlabel=5) 


could use this for the items identified by "annotate" step.
could also integrate this to getEIC tool (add option to give group list instead of m/z list)...but then rt and other options
   are also not so relevant...maybe a separate tool is more clear