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trying png again
author pieter.lukasse@wur.nl
date Fri, 07 Nov 2014 16:08:22 +0100
parents f4eb388f6dfe
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# get R http://cran.r-project.org/src/base/R-3/R-3.0.3.tar.gz

# installs Bioconductor
source("http://bioconductor.org/biocLite.R")
biocLite()

# upgrade? Some packages are "old"  and can be upgraded with: biocLite("BiocUpgrade")


#  install metaMS and multtest for differential analysis tool (from xcms)
biocLite("metaMS")
biocLite("multtest")

# for "multi-threading"  (actually starts multiple R processes for parallel processing):
install.packages("snow", repos="http://cran.rstudio.com/")
install.packages("Cairo", repos="http://cran.rstudio.com/")