Mercurial > repos > pjbriggs > pal_finder

annotate test-data/illuminaPE_assembly.out @ 4:cb56cc1d5c39 draft

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Updates to the palfilter.py utility.
author pjbriggs
date Mon, 21 Mar 2016 06:52:43 -0400
parents e1a14ed7a9d6
children
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4
cb56cc1d5c39 Updates to the palfilter.py utility.
pjbriggs
parents: 3
diff changeset
1 readPairID Forward Primer F Primer Position in Assembled Read Reverse Primer R Primer Position in Assembled Read Motifs(bases) Assembled Read ID Assembled Read Sequence Raw Forward Read ID Raw Forward Read Sequence Raw Reverse Read ID Raw Reverse Read Sequence
3
e1a14ed7a9d6 Updated to version 0.02.04.4 (new pal_filter script)
pjbriggs
parents: 2
diff changeset
2 ILLUMINA-545855:49:FC61RLR:2:1:19063:1614 1 1 AT(14) AT(14) AT(14) AT(14) >ILLUMINA-545855:49:FC61RLR:2:1:19063:1614 TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTGAAATGAGAAAAAAATATATATATATATGTTTATATATATATATA >ILLUMINA-545855:49:FC61RLR:2:1:19063:1614 TATATATATATATACACATATATATATATATTTTTTACATTATTTCACTTCGCCCAAACTAGAGAGTCTAACAAAGTACAACCCAGCATATTAAAGTTCATCTCAGTTTTGTTCTG >ILLUMINA-545855:49:FC61RLR:2:1:19063:1614 TATATATATATATAAACATATATATATATATTTTTTTCTCATTTCAGAACAAAAGTGAGATGAACTTTAATATGGTGGGGTGTATTTTGAGAGACTCTCTAGTTTGGGAGGAGTGA