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view test-data/illuminaPE_microsats.out @ 0:3f908e7fff4f draft

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author pjbriggs
date Thu, 11 Dec 2014 09:23:24 -0500
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readPairID	Motifs(bases)	Bases in all Motifs	Possible Extended	Possible Spanning	Primers found (1=y,0=n)	F Primer Name	Forward Primer	R Primer Name	Reverse Primer	Amplicon Motifs	Number motif bases in amplicon	Primers on sep reads	Extend with primers	Spand with primers	Occurances of Forward Primer in Reads	Occurances of Reverse Primer in Reads	Occurances of Amplifiable Primer Pair in Reads	Occurances of Amplifiable Primer Pair in PALs
ILLUMINA-545855_0049_FC61RLR:2:1:8044:1926#0	AT(12) 	12			0													
ILLUMINA-545855_0049_FC61RLR:2:1:1978:1220#0	AC(12) 	12			1	test_3	GCAGTAAACAAAGGCAAAGGG	test_4	CCTGGGCAGAGGTGTTCC	AC(12) 	12	1			1	1	1	1
ILLUMINA-545855_0049_FC61RLR:2:1:5879:1238#0	AT(12) 	12			0													
ILLUMINA-545855_0049_FC61RLR:2:1:8899:1514#0	AC(12) AC(12) 	24			1	test_2	TCTTTATCTAAACACATCCTGAAATACC	test_1	AAACGCAATTATTTTGAGATGTCC	AC(12) AC(12) 	24	1			1	2	1	1
ILLUMINA-545855_0049_FC61RLR:2:1:10979:1695#0	TC(14) 	14			1	test_7	TTCTCCCACTATATTTTGCATTGG	test_8	TCCAGACTGAAGCTACCCTGG	TC(14) 	14	1			1	1	1	1
ILLUMINA-545855_0049_FC61RLR:2:1:5626:1554#0	AT(14) AC(16) AC(16) AT(12) 	58			0													
ILLUMINA-545855_0049_FC61RLR:2:1:8157:1636#0	AC(12) 	12			1	test_5	AAGTACAGTGGGGAGGCTGG	test_6	TTTTCTACACAGCTCAAGTAGCCC	AC(12) 	12	1			1	1	1	1
ILLUMINA-545855_0049_FC61RLR:2:1:19063:1614#0	AT(14) AT(14) AT(14) AT(14) 	56			0													
ILLUMINA-545855_0049_FC61RLR:2:1:17449:1584#0	AC(36) 	36			0													
ILLUMINA-545855_0049_FC61RLR:2:1:6204:1090#0	TC(12) 	12			0