Mercurial > repos > pjbriggs > pal_finder
view test-data/illuminaPE_microsat_types.out.re_match @ 8:4e625d3672ba draft
Pal_finder tool version 0.02.04.7: add detection/reporting of bad ranges; enable subset of reads to be used; check n-mers.
| author | pjbriggs |
|---|---|
| date | Wed, 16 May 2018 07:39:16 -0400 |
| parents | 5e133b7b79a6 |
| children |
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allExtended\:\ 0 allSpan\:\ 0 broken\:\ 2 compound\:\ 2 readsWithMicrosat\:\ 13 totalBases\:\ 2320 totalReads\:\ 20\ \(2\ x\ 10\) Microsat\ Type\ monomer\ length\ total\ loci\ loci\ w\/\ primers\ reads\ with\ loci\ total\ bases\ extended\ extended\ w\/\ primers\ spanning\ spanning\ w\/\ primers (AC\ 2\ 7\ 4\ 7\ 116\ 0\ 0\ 0\ 0)? (AG\ 2\ 0\ 0\ 0\ 0\ 0\ 0\ 0\ 0)? (AT\ 2\ 8\ 0\ 6\ 106\ 0\ 0\ 0\ 0)? CG\ 2\ 0\ 0\ 0\ 0\ 0\ 0\ 0\ 0 TC\ 2\ 2\ 1\ 2\ 26\ \ \ \ (TG\ 2\ 7\ 4\ 7\ 116\ \ \ \ )?