Mercurial > repos > pjbriggs > trimmomatic
view package_trimmomatic.sh @ 3:f8a9a5eaca8a draft
Updated to version 0.32.3: add support for FASTQ pairs (dataset collections)
author | pjbriggs |
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date | Wed, 23 Sep 2015 08:59:23 -0400 |
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#!/bin/sh # # Package Trimmomatic tool files into tgz file for upload to # Galaxy toolshed # TGZ=trimmomatic.tgz if [ -f $TGZ ] ; then echo $TGZ: already exists, please remove >&2 exit 1 fi tar cvzf $TGZ \ README.rst \ trimmomatic.xml \ trimmomatic.sh \ tool_dependencies.xml \ test-data if [ -f $TGZ ] ; then echo Created $TGZ else echo Failed to created $TGZ >&2 exit 1 fi ## #