annotate tool_dependencies.xml @ 19:0ce63ea15848 draft

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author priti
date Mon, 09 Jun 2014 02:38:45 -0400
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="softsearch" version="0.6">
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4 <install version="1.0">
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5 <actions>
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6 <action type="shell_command">mkdir -p $HOME/projects/galaxy</action>
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7 <action type="shell_command">cd $HOME/projects/galaxy</action>
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8 <action type="shell_command">wget https://bitbucket.org/ambhoreshirish97/softsearch/get/559fa729cc65.zip
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9 </action>
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10 <action type="shell_command">unzip 559fa729cc65.zip</action>
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11 <action type="shell_command">cd ambhoreshirish97-softsearch-559fa729cc65</action>
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12 <action type="shell_command">perl ./install.pl --prefix=$INSTALL_DIR</action>
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13 <action type="shell_command">export PERL5LIB=$PERL5LIB:$INSTALL_DIR:$INSTALL_DIR/lib</action>
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14 <action type="set_environment">
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15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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16 </action>
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17 </actions>
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18 </install>
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19 </package>
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20 </tool_dependency>