Mercurial > repos > proteomisc > preprocess_dataset
view preprocess_datasets/OneColor.Rmd @ 41:8aaf6fdb06d6 draft
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author | proteomisc |
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date | Sat, 16 Dec 2023 12:30:14 +0000 |
parents | ebf6607b4e6a |
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<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="fr" lang="fr"><head> <meta http-equiv="Content-Type" content="text/html; charset=windows-1252"> <title>Preprocessing Plots Before and After</title> <style> /* css racine */ body { /* font-family: Comic Sans MS;*/ } div.research { background-color: #33ffff; /*#208090 */ /*#228491*/; color: #0000ff; /* ffffff */ } div.ensg { background-color: #bbee00; color: #0000ff; } div.research span.invisible { visibility:hidden; } kbd { color: #000000; } pre { color: #000000; } A:link { color: #0000ee; /*#ffffff;*/ } A:active { color: #ff0000; /* #ffffff */ } A:hover { /* font-size: 2em; */ text-decoration: none; color: #0000ee; /* ffffff */ background-color: #FFFF33; } h3 { color: #FF0000; } h4 { color: #FF0000; } div.correction { color: #008800; /* color: #000000; */ } div.detail { font-size: 70%; } div.section { text-align: center; font-size: 140%; color: #FF0000; } div.subsection { text-align: left; font-size: 120%; color: #bb0000; background-color: #FFFF33; } div.titreDuModule { text-align: center; font-size: 200%; color: #FF0099; } div.formation { text-align: center; font-size: 120%; color: #FF0099; } div.ensg.titreDuModule { text-align: center; font-size: 200%; color: #FF0099; } div.ensg.formation { text-align: center; font-size: 120%; color: #FF0099; } span.indice { font-size: 70%; } span.question { color: #bb0000; } span.tresImportant { color: #bb0000; font-size: 200% } span.assezImportant { color: #bb0000; font-size: 150% } span.important { color: #bb0000; } span.crucial { color: #bb0000; } span.crucial:hover { font-size: 400%; } acronym { text-decoration: none; } div.theoreme:before { content: "Théorème : "; } div.theoreme:after { content: "emèroéhT"; } div.theoreme ul li:before { content: "1 alinéa "; } div.theoreme li:after { content: " ce qui termine l'alinéa"; } div.tpID { background-color: #33ffff; color: #0000ff; } div.tpR { font-family: serif; color: #000000; background-color: #fff; } div.tpR span.detail { font-size: 75%; } div.tpR div.correction:before { content: "Idée de la correction : "; } div.tpR div.correction { background-color: #00ffff; border: solid #009999; padding: 0.5em; margin-left: 2em; border-width: 1px; } div.tpR div.exercices:before { content: "Exercices : "; } div.tpR div.exercices { background-color: #00ee00; border: solid #00cc00; padding: 0.5em; margin-left: 2em; border-width: 1px; } div.tpR div.solution:before { content: "Solution : "; } div.tpR div.solution { background-color: #ff00ff; border: solid #990099; padding: 0.5em; margin-left: 2em; border-width: 1px; } div.tpR div.exercice:before { content: "Exercice : "; } div.tpR div.exercice { background-color: #00ee00; border: solid #00cc00; padding: 0.5em; margin-left: 2em; border-width: 1px; } div.tpR div.questions:before { content: "Questions : "; } div.tpR div.questions { background-color: #ff99ff; border: solid #ff99ff; padding: 0.5em; margin-left: 2em; border-width: 1px; } div.tpR span.index { /* background-color: #ffff33;*/ } div.tpR h1 { font-family: sans-serif; color: #000; border-style: solid; background-color: #ddf; border-color: #88f; border-width: 1px; padding-left: 0.5em; } div.tpR h2 { font-family: sans-serif; color: #000; border-style: solid; border-color: #8f8; background-color: #dfd; border-width: 1px; padding-left: 0.5em; } div.tpR h3 { font-family: sans-serif; color: #000; border-style: solid; background-color: #fdd; border-color: #f88; border-width: 1px; padding-left: 0.5em; } div.tpR a:link { color: #00f } div.tpR a:visited { color: #f0f } div.tpR p { margin-left: 1em; } div.tpR pre { background-color: #eee; border: solid #ccc; padding: 0.5em; margin-left: 2em; border-width: 1px; } .redify pre { color: #ff0000; } div.tpR hr { border-style: solid; border-color: #02c; background-color: #ddf; border-color: #88f; border-width: 1px; padding-top: 1px; padding-bottom: 1px; } div.pp { color: #FF0000; } div.infobulle{ position: absolute; visibility : hidden; border: 1px solid Black; padding: 10px; font-family: Verdana, Arial; font-size: 13px; background-color: #ffffff; -moz-border-radius: 20px; /* pour avoir des coins arrondis */ } /* http://www.w3schools.com/CSS/css_display_visibility.asp */ span.commentPub{ background-color: #77ff33; } span.moreCommentOnPub{ /* position: absolute;*/ /* visibility : hidden;*/ /* border: 1px solid Black; padding: 10px; font-family: Verdana, Arial; font-size: 13px;*/ background-color: #77ff33; -moz-border-radius: 3em 1em /* 20px; pour avoir des coins arrondis */ border-radius: 3em 1em; /* 20px; pour avoir des coins arrondis */ } </style> </head> <body> <div class="tpR"> <h1>Preprocessing</h1> <p> Preprocessing of an `r datasetsource` DataSet, issued from `r technology` technology. </p> <h2>Used methods for each step</h2> <h3>Background correction methods</h3> <pre>method : `r listArguments[["methodBC"]]`</pre> <h3>Normalization methods</h3> <pre>method : `r listArguments[["methodNBA"]]`</pre> <h2>Boxplots</h2> <h3>Before BG</h3> <p> <br> <img src="boxplot_before_BG.png" width="100%" height="auto"> <br> </p> <h3>After NBA</h3> <p> <br> <img src="boxplot_after_NBA.png" width="100%" height="auto"> <br> </p> <h2>Densities plot</h2> <h3>Before BG</h3> <p> <br> <img src="densities_plot_before_BG.png" width="100%" height="auto"> <br> </p> <h3>After BG and NBA</h3> <p> <br> <img src="densities_plot_after_BG.png" width="100%" height="auto"> <br> </p> <p> <br> <img src="densities_plot_after_NBA.png" width="100%" height="auto"> <br> </p> </body> </html>