diff README.rst @ 5:1e9911190142 draft

planemo upload commit 08f1831e097df5d74bf60ff5955e7e9c8e524cc8-dirty
author proteore
date Wed, 14 Mar 2018 10:24:54 -0400
parents 593b8a1b2a7b
children c6ba1e6f6869
line wrap: on
line diff
--- a/README.rst	Thu Mar 08 10:41:08 2018 -0500
+++ b/README.rst	Wed Mar 14 10:24:54 2018 -0400
@@ -13,7 +13,7 @@
 
 -------------------------------------------------------
 
-This tool allows to remove unneeded data (e.g. contaminants, non-significant values) from a proteomics results file (e.g. MaxQuant or Proline output).
+This tool allows to filter out data according to your specific needs (e.g. contaminants, non-significant values or related to a particular annotation) from a proteomics results file (e.g. MaxQuant or Proline output).
 
 **For each row, if there are more than one protein IDs/protein names/gene names, only the first one will be considered in the output**
 
@@ -31,17 +31,17 @@
 
 ALDOA_RABBIT
 
-**The line that contains these keywords will be eliminated from input file.**
+**The line that contains these keywords will be filtered from input file and provided in a separate file.**
 
 **Keywords search can be applied by performing either exact match or partial one by using the following option**
 
-- If you choose **Yes**, only the fields that contains exactly the same content will be removed.
+- If you choose **Yes**, only the fields that contains exactly the same content will be filtered.
 
-- If you choose **No**, all the fields containing the keyword will be removed.
+- If you choose **No**, all the fields containing the keyword will be filtered.
 
 For example:
 
-**Yes** option (exact match) selected using the keyword "kinase": only lines which contain exactly "kinase" is removed.
+**Yes** option (exact match) selected using the keyword "kinase": only lines which contain exactly "kinase" is filtered (and not "Kinase").
 
 **No** option (partial match) for "kinase": not only lines which contain "kinase" but also lines with "alpha-kinase" (and so  on) are removed.
 
@@ -57,4 +57,4 @@
 
 * A text file containing the resulting filtered input file.
 
-* A text file containing the rows removed from the input file.
\ No newline at end of file
+* A text file containing the rows that have been filtered from the input file.