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annotate test-data/ID_Converter_FKW_Lacombe_et_al_2017_OK.txt @ 1:1236ee08ccb8 draft

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planemo upload commit 5774fd6a5a746f36f6bf4671a51a39ea2b978300-dirty
author proteore
date Fri, 16 Feb 2018 03:40:36 -0500
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1 Protein accession number (UniProt) Protein name Number of peptides (razor + unique) neXtProt_ID UniProt.ID GeneID MIM Ensembl
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2 P15924 Desmoplakin 69 NX_P15924 DESP_HUMAN 1832 125647; 605676; 607450; 607655; 609638; 612908; 615821 ENSG00000096696
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3 P02538 Keratin, type II cytoskeletal 6A 53 NX_P02538 K2C6A_HUMAN 3853 148041; 615726 ENSG00000205420
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4 P02768 Serum albumin 44 NX_P02768 ALBU_HUMAN 213 103600; 615999; 616000 ENSG00000163631
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5 P08779 Keratin, type I cytoskeletal 16 29 NX_P08779 K1C16_HUMAN 3868 148067; 167200; 613000 ENSG00000186832
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6 Q02413 Desmoglein-1 24 NX_Q02413 DSG1_HUMAN 1828 125670; 148700; 615508 ENSG00000134760
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7 P07355 Annexin A2;Putative annexin A2-like protein 22 NX_P07355 ANXA2_HUMAN 302 151740 ENSG00000182718
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8 P14923 Junction plakoglobin 22 NX_P14923 PLAK_HUMAN 3728 173325; 601214; 611528 ENSG00000173801
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9 P02788 Lactotransferrin 21 NX_P02788 TRFL_HUMAN 4057 150210 ENSG00000012223
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10 Q9HC84 Mucin-5B 21 NX_Q9HC84 MUC5B_HUMAN 727897 178500; 600770 ENSG00000117983
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11 P29508 Serpin B3 20 NX_P29508 SPB3_HUMAN 6317 600517 ENSG00000057149
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12 P63261 Actin, cytoplasmic 2 19 NX_P63261 ACTG_HUMAN 71 102560; 604717; 614583 ENSG00000184009
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13 Q8N1N4 Keratin, type II cytoskeletal 78 18 NX_Q8N1N4 K2C78_HUMAN 196374 611159 ENSG00000170423
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14 Q04695 Keratin, type I cytoskeletal 17 18 NX_Q04695 K1C17_HUMAN 3872 148069; 167210; 184500 ENSG00000128422
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15 P01876 Ig alpha-1 chain C region 16 NX_P01876 IGHA1_HUMAN NA 146900 ENSG00000211895; ENSG00000282633
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16 Q01469 Fatty acid-binding protein 5, epidermal 15 NX_Q01469 FABP5_HUMAN 2171 605168 ENSG00000164687
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17 P31944 Caspase-14 15 NX_P31944 CASPE_HUMAN 23581 605848; 617320 ENSG00000105141
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18 P01833 Polymeric immunoglobulin receptor 15 NX_P01833 PIGR_HUMAN 5284 173880 ENSG00000162896
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19 P06733 Alpha-enolase 15 NX_P06733 ENOA_HUMAN 2023 172430 ENSG00000074800
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20 P25311 Zinc-alpha-2-glycoprotein 15 NX_P25311 ZA2G_HUMAN 563 194460 ENSG00000160862
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21 Q15149 Plectin 15 NX_Q15149 PLEC_HUMAN 5339 131950; 226670; 601282; 612138; 613723; 616487 ENSG00000178209
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22 P19013 Keratin, type II cytoskeletal 4 13 NX_P19013 K2C4_HUMAN NA 123940; 193900 ENSG00000170477
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23 Q6KB66 Keratin, type II cytoskeletal 80 13 NX_Q6KB66 K2C80_HUMAN 144501 611161 ENSG00000167767
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24 Q08188 Protein-glutamine gamma-glutamyltransferase E 12 NX_Q08188 TGM3_HUMAN 7053 600238; 617251 ENSG00000125780
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25 P13646 Keratin, type I cytoskeletal 13 11 NX_P13646 K1C13_HUMAN 3860 148065; 615785 ENSG00000171401
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26 Q86YZ3 Hornerin 11 NX_Q86YZ3 HORN_HUMAN 388697 616293 ENSG00000197915
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27 P04259 Keratin, type II cytoskeletal 6B 10 NX_P04259 K2C6B_HUMAN 3854 148042; 615728 ENSG00000185479
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28 P02545 Prelamin-A/C;Lamin-A/C 10 NX_P02545 LMNA_HUMAN 4000 115200; 150330; 151660; 159001; 176670; 181350; 212112; 248370; 275210; 605588; 610140; 613205; 616516 ENSG00000160789
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29 P04083 Annexin A1 10 NX_P04083 ANXA1_HUMAN 301 151690 ENSG00000135046
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30 P11021 78 kDa glucose-regulated protein 10 NX_P11021 GRP78_HUMAN 3309 138120 ENSG00000044574
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31 P02787 Serotransferrin 9 NX_P02787 TRFE_HUMAN 7018 190000; 209300 ENSG00000091513
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32 P04040 Catalase 9 NX_P04040 CATA_HUMAN 847 115500; 614097 ENSG00000121691
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33 P31151 Protein S100-A7 9 NX_P31151 S10A7_HUMAN 6278 600353 ENSG00000143556
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34 P31947 14-3-3 protein sigma 9 NX_P31947 1433S_HUMAN 2810 601290 ENSG00000175793
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35 Q96P63 Serpin B12 9 NX_Q96P63 SPB12_HUMAN 89777 615662 ENSG00000166634
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36 P14618 Pyruvate kinase PKM 9 NX_P14618 KPYM_HUMAN 5315 179050 ENSG00000067225
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37 P60174 Triosephosphate isomerase 9 NX_P60174 TPIS_HUMAN 7167 190450; 615512 ENSG00000111669
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38 Q06830 Peroxiredoxin-1 9 NX_Q06830 PRDX1_HUMAN 5052 176763 ENSG00000117450
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39 P01040 Cystatin-A 8 NX_P01040 CYTA_HUMAN 1475 184600; 607936 ENSG00000121552
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40 P05089 Arginase-1 8 NX_P05089 ARGI1_HUMAN 383 207800; 608313 ENSG00000118520
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41 P01834 Ig kappa chain C region 8 NX_P01834 IGKC_HUMAN NA 147200; 614102 NA
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42 P04406 Glyceraldehyde-3-phosphate dehydrogenase 8 NX_P04406 G3P_HUMAN 2597 138400 ENSG00000111640
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43 P0DMV9 Heat shock 70 kDa protein 1B 8 NX_P0DMV9 HS71B_HUMAN 3303; 3304 140550; 603012 ENSG00000204388; ENSG00000224501; ENSG00000212866; ENSG00000231555; ENSG00000232804
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44 P13639 Elongation factor 2 8 NX_P13639 EF2_HUMAN 1938 130610; 609306 ENSG00000167658
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45 P35579 Myosin-9 8 NX_P35579 MYH9_HUMAN 4627 153640; 153650; 155100; 160775; 600208; 603622; 605249 ENSG00000100345
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46 P68371 Tubulin beta-4B chain 8 NX_P68371 TBB4B_HUMAN 10383 602660 ENSG00000188229
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47 Q8WVV4 Protein POF1B 8 NX_Q8WVV4 POF1B_HUMAN 79983 300603; 300604 ENSG00000124429
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48 O75635 Serpin B7 7 NX_O75635 SPB7_HUMAN 8710 603357; 615598 ENSG00000166396
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49 P01857 Ig gamma-1 chain C region 7 NX_P01857 IGHG1_HUMAN NA 147100; 254500 ENSG00000211896; ENSG00000277633
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50 P61626 Lysozyme C 7 NX_P61626 LYSC_HUMAN 4069 105200; 153450 ENSG00000090382
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51 P68363 Tubulin alpha-1B chain 7 NX_P68363 TBA1B_HUMAN 10376 602530 ENSG00000123416
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52 P01009 Alpha-1-antitrypsin;Short peptide from AAT 6 NX_P01009 A1AT_HUMAN 5265 107400; 613490 ENSG00000197249
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53 P07900 Heat shock protein HSP 90-alpha 6 NX_P07900 HS90A_HUMAN 3320 140571 ENSG00000080824
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54 Q9NZH8 Interleukin-36 gamma 6 NX_Q9NZH8 IL36G_HUMAN 56300 605542 ENSG00000136688
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55 O43707 Alpha-actinin-4;Alpha-actinin-1 6 NX_O43707 ACTN4_HUMAN 81 603278; 604638 ENSG00000130402; ENSG00000282844
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56 O75223 Gamma-glutamylcyclotransferase 6 NX_O75223 GGCT_HUMAN 79017 137170 ENSG00000006625
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57 P00338 L-lactate dehydrogenase A chain 6 NX_P00338 LDHA_HUMAN 3939 150000; 612933 ENSG00000134333
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58 P07339 Cathepsin D 6 NX_P07339 CATD_HUMAN 1509 116840; 610127 ENSG00000117984
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59 P62987 Ubiquitin-60S ribosomal protein L40 6 NX_P62987 RL40_HUMAN 7311 191321 ENSG00000221983
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60 P10599 Thioredoxin 6 NX_P10599 THIO_HUMAN 7295 187700 ENSG00000136810
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61 Q9UGM3 Deleted in malignant brain tumors 1 protein 6 NX_Q9UGM3 DMBT1_HUMAN 1755 137800; 601969 ENSG00000187908
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62 Q9UI42 Carboxypeptidase A4 6 NX_Q9UI42 CBPA4_HUMAN 51200 607635 ENSG00000128510
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63 P47929 Galectin-7 5 NX_P47929 LEG7_HUMAN 3963; 653499 600615; 617139 ENSG00000178934; ENSG00000205076; ENSG00000282902; ENSG00000283082
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64 Q13867 Bleomycin hydrolase 5 NX_Q13867 BLMH_HUMAN 642 602403 ENSG00000108578
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65 Q6P4A8 Phospholipase B-like 1 5 NX_Q6P4A8 PLBL1_HUMAN 79887 NA ENSG00000121316
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66 O75369 Filamin-B 5 NX_O75369 FLNB_HUMAN 2317 108720; 108721; 112310; 150250; 272460; 603381 ENSG00000136068
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67 P00441 Superoxide dismutase [Cu-Zn] 5 NX_P00441 SODC_HUMAN 6647 105400; 147450 ENSG00000142168
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68 P04792 Heat shock protein beta-1 5 NX_P04792 HSPB1_HUMAN 3315 602195; 606595; 608634 ENSG00000106211
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69 P11142 Heat shock cognate 71 kDa protein 5 NX_P11142 HSP7C_HUMAN 3312 600816 ENSG00000109971
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70 P58107 Epiplakin 5 NX_P58107 EPIPL_HUMAN 83481 607553 NA
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71 P60842 Eukaryotic initiation factor 4A-I 5 NX_P60842 IF4A1_HUMAN 1973 602641 ENSG00000161960
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72 P62937 Peptidyl-prolyl cis-trans isomerase A 5 NX_P62937 PPIA_HUMAN 5478 123840 ENSG00000196262
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73 P63104 14-3-3 protein zeta/delta 5 NX_P63104 1433Z_HUMAN 7534 601288 ENSG00000164924
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74 Q92820 Gamma-glutamyl hydrolase 5 NX_Q92820 GGH_HUMAN 8836 601509 ENSG00000137563
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75 O75342 Arachidonate 12-lipoxygenase, 12R-type 4 NX_O75342 LX12B_HUMAN 242 242100; 603741 ENSG00000179477
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76 P09211 Glutathione S-transferase P 4 NX_P09211 GSTP1_HUMAN 2950 134660 ENSG00000084207
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77 P31025 Lipocalin-1 4 NX_P31025 LCN1_HUMAN 3933 151675 ENSG00000160349
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78 P48594 Serpin B4 4 NX_P48594 SPB4_HUMAN 6318 600518 ENSG00000206073
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79 Q14574 Desmocollin-3 4 NX_Q14574 DSC3_HUMAN 1825 600271; 613102 ENSG00000134762
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80 Q5T750 Skin-specific protein 32 4 NX_Q5T750 XP32_HUMAN 100129271 NA ENSG00000198854
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81 Q6UWP8 Suprabasin 4 NX_Q6UWP8 SBSN_HUMAN 374897 609969 ENSG00000189001
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82 O60911 Cathepsin L2 4 NX_O60911 CATL2_HUMAN 1515 603308 ENSG00000136943
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83 P00558 Phosphoglycerate kinase 1 4 NX_P00558 PGK1_HUMAN 5230 300653; 311800 ENSG00000102144
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84 P04075 Fructose-bisphosphate aldolase A 4 NX_P04075 ALDOA_HUMAN 226 103850; 611881 ENSG00000149925
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proteore
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diff changeset
85 P07384 Calpain-1 catalytic subunit 4 NX_P07384 CAN1_HUMAN 823 114220; 616907 ENSG00000014216
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proteore
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diff changeset
86 P0CG05 Ig lambda-2 chain C regions 4 NA NA NA NA NA
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proteore
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diff changeset
87 P18206 Vinculin 4 NX_P18206 VINC_HUMAN 7414 193065; 611407; 613255 ENSG00000035403
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proteore
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diff changeset
88 P62258 14-3-3 protein epsilon 4 NX_P62258 1433E_HUMAN 7531 605066 ENSG00000108953; ENSG00000274474
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proteore
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diff changeset
89 P68871 Hemoglobin subunit beta 4 NX_P68871 HBB_HUMAN 3043 140700; 141900; 603902; 603903; 611162; 613985 ENSG00000244734
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proteore
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diff changeset
90 Q9C075 Keratin, type I cytoskeletal 23 4 NX_Q9C075 K1C23_HUMAN 25984 606194 ENSG00000108244; ENSG00000263309
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proteore
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diff changeset
91 A8K2U0 Alpha-2-macroglobulin-like protein 1 3 NX_A8K2U0 A2ML1_HUMAN 144568 610627 ENSG00000166535
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proteore
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diff changeset
92 P00738 Haptoglobin 3 NX_P00738 HPT_HUMAN 3240 140100; 614081 ENSG00000257017
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diff changeset
93 P01011 Alpha-1-antichymotrypsin 3 NX_P01011 AACT_HUMAN 12 107280 ENSG00000196136
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proteore
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diff changeset
94 P02763 Alpha-1-acid glycoprotein 1 3 NX_P02763 A1AG1_HUMAN 5004 138600 ENSG00000229314
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proteore
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diff changeset
95 P18510 Interleukin-1 receptor antagonist protein 3 NX_P18510 IL1RA_HUMAN 3557 147679; 612628; 612852 ENSG00000136689
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proteore
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96 P22528 Cornifin-B 3 NX_P22528 SPR1B_HUMAN 6699 182266 ENSG00000169469
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97 P30740 Leukocyte elastase inhibitor 3 NX_P30740 ILEU_HUMAN 1992 130135 ENSG00000021355
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98 P80188 Neutrophil gelatinase-associated lipocalin 3 NX_P80188 NGAL_HUMAN 3934 600181 ENSG00000148346
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99 Q15828 Cystatin-M 3 NX_Q15828 CYTM_HUMAN 1474 601891 ENSG00000175315
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proteore
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100 Q9HCY8 Protein S100-A14 3 NX_Q9HCY8 S10AE_HUMAN 57402 607986 ENSG00000189334
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proteore
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diff changeset
101 P01623 Ig kappa chain V-III region 3 NA NA NA NA NA
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proteore
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102 P01877 Ig alpha-2 chain C region 3 NX_P01877 IGHA2_HUMAN NA 147000 ENSG00000211890
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103 P06396 Gelsolin 3 NX_P06396 GELS_HUMAN 2934 105120; 137350 ENSG00000148180
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104 P14735 Insulin-degrading enzyme 3 NX_P14735 IDE_HUMAN 3416 146680 ENSG00000119912
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105 P20933 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase 3 NX_P20933 ASPG_HUMAN 175 208400; 613228 ENSG00000038002
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106 P25788 Proteasome subunit alpha type-3 3 NX_P25788 PSA3_HUMAN 5684 176843; 176845 ENSG00000100567
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proteore
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107 P26641 Elongation factor 1-gamma 3 NX_P26641 EF1G_HUMAN 1937 130593 ENSG00000254772
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108 P36952 Serpin B5 3 NX_P36952 SPB5_HUMAN 5268 154790 ENSG00000206075
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109 P40926 Malate dehydrogenase, mitochondrial 3 NX_P40926 MDHM_HUMAN 4191 154100; 617339 ENSG00000146701
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110 Q9Y6R7 IgGFc-binding protein 3 NX_Q9Y6R7 FCGBP_HUMAN 8857 617553 ENSG00000281123
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111 O95274 Ly6/PLAUR domain-containing protein 3 2 NX_O95274 LYPD3_HUMAN 27076 609484 ENSG00000124466
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112 P00491 Purine nucleoside phosphorylase 2 NX_P00491 PNPH_HUMAN 4860 164050; 613179 ENSG00000198805
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113 P04080 Cystatin-B 2 NX_P04080 CYTB_HUMAN 1476 254800; 601145 ENSG00000160213
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114 P09972 Fructose-bisphosphate aldolase C 2 NX_P09972 ALDOC_HUMAN 230 103870 ENSG00000109107
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115 P19012 Keratin, type I cytoskeletal 15 2 NX_P19012 K1C15_HUMAN 3866 148030 ENSG00000171346
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116 P20930 Filaggrin 2 NX_P20930 FILA_HUMAN 2312 135940; 146700; 605803 ENSG00000143631
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117 Q96FX8 p53 apoptosis effector related to PMP-22 2 NX_Q96FX8 PERP_HUMAN 64065 609301 ENSG00000112378
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118 Q9UIV8 Serpin B13 2 NX_Q9UIV8 SPB13_HUMAN 5275 604445 ENSG00000197641
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119 P01625 Ig kappa chain V-IV region Len 2 NA NA NA NA NA
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120 P01765 Ig heavy chain V-III region TIL 2 NA NA NA NA NA
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proteore
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121 P01766 Ig heavy chain V-III region BRO 2 NX_P01766 HV313_HUMAN NA NA ENSG00000211942; ENSG00000282286
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122 P01860 Ig gamma-3 chain C region 2 NX_P01860 IGHG3_HUMAN NA 147120 NA
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123 P01871 Ig mu chain C region 2 NX_P01871 IGHM_HUMAN NA 147020; 601495 ENSG00000211899; ENSG00000282657
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124 P05090 Apolipoprotein D 2 NX_P05090 APOD_HUMAN 347 107740 ENSG00000189058
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125 P06870 Kallikrein-1 2 NX_P06870 KLK1_HUMAN 3816 147910; 615953 ENSG00000167748
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126 P07858 Cathepsin B 2 NX_P07858 CATB_HUMAN 1508 116810 ENSG00000164733
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127 P08865 40S ribosomal protein SA 2 NX_P08865 RSSA_HUMAN 3921 150370; 271400 ENSG00000168028
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128 P11279 Lysosome-associated membrane glycoprotein 1 2 NX_P11279 LAMP1_HUMAN 3916 153330 ENSG00000185896
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129 P13473 Lysosome-associated membrane glycoprotein 2 2 NX_P13473 LAMP2_HUMAN 3920 300257; 309060 ENSG00000005893
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130 P19971 Thymidine phosphorylase 2 NX_P19971 TYPH_HUMAN 1890 131222; 603041 ENSG00000025708
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131 P23284 Peptidyl-prolyl cis-trans isomerase B 2 NX_P23284 PPIB_HUMAN 5479 123841; 259440 ENSG00000166794
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132 P23396 40S ribosomal protein S3 2 NX_P23396 RS3_HUMAN 6188 600454 ENSG00000149273
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133 P25705 ATP synthase subunit alpha, mitochondrial 2 NX_P25705 ATPA_HUMAN 498 164360; 615228; 616045 ENSG00000152234
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134 P27482 Calmodulin-like protein 3 2 NX_P27482 CALL3_HUMAN 810 114184 ENSG00000178363
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135 P31949 Protein S100-A11 2 NX_P31949 S10AB_HUMAN 6282 603114 ENSG00000163191
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136 P40121 Macrophage-capping protein 2 NX_P40121 CAPG_HUMAN 822 153615 ENSG00000042493
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137 P42357 Histidine ammonia-lyase 2 NX_P42357 HUTH_HUMAN 3034 235800; 609457 ENSG00000084110
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138 P47756 F-actin-capping protein subunit beta 2 NX_P47756 CAPZB_HUMAN 832 601572 ENSG00000077549
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139 P48637 Glutathione synthetase 2 NX_P48637 GSHB_HUMAN 2937 231900; 266130; 601002 ENSG00000100983
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140 P49720 Proteasome subunit beta type-3 2 NX_P49720 PSB3_HUMAN 5691 602176 ENSG00000277791; ENSG00000275903
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141 P50395 Rab GDP dissociation inhibitor beta 2 NX_P50395 GDIB_HUMAN 2665 600767 ENSG00000057608
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142 P59998 Actin-related protein 2/3 complex subunit 4 2 NX_P59998 ARPC4_HUMAN 10093 604226 ENSG00000241553
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143 P61160 Actin-related protein 2 2 NX_P61160 ARP2_HUMAN 10097 604221 ENSG00000138071
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144 P61916 Epididymal secretory protein E1 2 NX_P61916 NPC2_HUMAN 10577 601015; 607625 ENSG00000119655
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145 P04745 Alpha-amylase 1 23 NX_P04745 AMY1_HUMAN 276; 277; 278 104700; 104701; 104702 ENSG00000174876; ENSG00000187733; ENSG00000237763
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146 Q9NZT1 Calmodulin-like protein 5 8 NX_Q9NZT1 CALL5_HUMAN 51806 605183 ENSG00000178372
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147 P12273 Prolactin-inducible protein 6 NX_P12273 PIP_HUMAN 5304 176720 ENSG00000159763
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148 Q96DA0 Zymogen granule protein 16 homolog B 5 NX_Q96DA0 ZG16B_HUMAN 124220 NA ENSG00000162078; ENSG00000283056
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149 P01036 Cystatin-S 5 NX_P01036 CYTS_HUMAN 1472 123857 ENSG00000101441
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150 Q8TAX7 Mucin-7 2 NX_Q8TAX7 MUC7_HUMAN 4589 158375; 600807 ENSG00000171195
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151 P01037 Cystatin-SN 2 NX_P01037 CYTN_HUMAN 1469 123855 ENSG00000170373
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152 P09228 Cystatin-SA 2 NX_P09228 CYTT_HUMAN 1470 123856 ENSG00000170369