Mercurial > repos > proteore > proteore_kegg_pathways_coverage

changeset 2:60368fca9772 draft

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planemo upload commit 89cd1b5f2ca7b135abfe2d9ed18bf2478a59e099-dirty
author proteore
date Tue, 05 Mar 2019 09:37:56 -0500
parents d600ce7f2484
children 0308c2d81607
files kegg_identification.xml
diffstat 1 files changed, 5 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/kegg_identification.xml	Tue Dec 18 10:00:40 2018 -0500
+++ b/kegg_identification.xml	Tue Mar 05 09:37:56 2019 -0500
@@ -1,5 +1,5 @@
-<tool id="kegg_identification" name="KEGG pathways identification" version="2018.12.12">
-    <description>and coverage</description>
+<tool id="kegg_identification" name="Pathways identification" version="2019.03.05">
+    <description>and coverage [KEGG]</description>
     <requirements>
         <requirement type="package" version="1.18.0">bioconductor-keggrest</requirement>
     </requirements>
@@ -41,7 +41,9 @@
             <when value="file" >
                 <param name="file" type="data" format="txt,tabular,tsv" label="Select your file" help="" />
                 <param name="header" type="boolean" checked="true" truevalue="true" falsevalue="false" label="Does file contain header?" />
-                <param name="ncol" type="text" value="c1" label="Column number of IDs" help='For example, fill in "c1" if it is the first column, "c2" if it is the second column and so on' />
+                <param name="ncol" type="text" value="c1" label="Column number of IDs" help='For example, fill in "c1" if it is the first column, "c2" if it is the second column and so on'>
+                    <validator type="regex" message="Please enter a column number, for example: 'c1' for the first column">[c]{0,1}[0-9]+</validator>
+                </param>
             </when>
         </conditional>
         <param name="id_type" type="select" label="Select IDs" >