Mercurial > repos > proteore > proteore_reactome
diff reactome_analysis.xml @ 5:7fbd66f985b7 draft
planemo upload commit b404b1f6719a07b1af9a2752ca3794b9b23d5143
author | proteore |
---|---|
date | Tue, 10 Apr 2018 04:35:05 -0400 |
parents | 878128362e33 |
children | 9cc475dcd0f2 |
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--- a/reactome_analysis.xml Tue Apr 03 08:24:45 2018 -0400 +++ b/reactome_analysis.xml Tue Apr 10 04:35:05 2018 -0400 @@ -33,9 +33,9 @@ </param> </when> <when value="file" > - <param name="file" type="data" format="txt, tabular" label="Input file containing your identifiers" help="Input file is a tab-delimited file containing different information of proteins, such as an output of MaxQuant software" /> + <param name="file" type="data" format="txt, tabular" label="Input file containing your identifiers" help="Input file is a tab-delimited file with at least one contain containing identifier" /> <param name="header" type="boolean" checked="true" truevalue="true" falsevalue="false" label="Does your input file contain header?" /> - <param type="text" name="ncol" value="c1" label="Please specify the column where you would like to apply the comparison" help ='For example, fill in "c1" if you want to filter the first column' /> + <param type="text" name="ncol" value="c1" label="Please specify the column number where are your IDs (e.g : Enter c1 for column n°1)" /> </when> </conditional> @@ -43,7 +43,7 @@ <outputs> <data name="output" format="html" label="" /> <data name="trash" format="tabular" hidden="true" label="Invalid id not send to reactome"> - <discover_datasets pattern="(Reactome_Analysis_Tools_invalid_ID).txt" ext="txt" visible="false" assign_primary_output="false"/> + <discover_datasets pattern="(Reactome_Analysis_Tools_invalid_ID).txt" ext="txt" visible="false" assign_primary_output="false"/> </data> </outputs> <tests>