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| author | public-health-bioinformatics |
|---|---|
| date | Thu, 27 Oct 2022 19:13:25 +0000 |
| parents | 3ab9d37e547e |
| children |
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4.30 110613 110613 U 0 unclassified 95.70 2460255 2275 R 1 root 95.61 2457954 183 R1 131567 cellular organisms 95.57 2456964 1857 D 2 Bacteria 95.49 2455018 23797 P 1224 Proteobacteria 94.56 2431097 6676 C 1236 Gammaproteobacteria 94.30 2424266 24603 O 91347 Enterobacterales 93.31 2398811 656743 F 543 Enterobacteriaceae 50.00 1285371 684649 G 570 Klebsiella 18.86 484958 472369 S 1463165 Klebsiella quasipneumoniae 0.48 12432 12432 S1 1667327 Klebsiella quasipneumoniae subsp. quasipneumoniae 0.01 157 157 S1 1463164 Klebsiella quasipneumoniae subsp. similipneumoniae 3.67 94362 90556 S 573 Klebsiella pneumoniae 0.12 3090 1989 S1 72407 Klebsiella pneumoniae subsp. pneumoniae 0.04 986 986 S2 1193292 Klebsiella pneumoniae subsp. pneumoniae 1084 0.00 87 87 S2 272620 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 0.00 8 8 S2 1123862 Klebsiella pneumoniae subsp. pneumoniae Kp13 0.00 5 5 S2 1328324 Klebsiella pneumoniae subsp. pneumoniae KPNIH27 0.00 4 4 S2 1125630 Klebsiella pneumoniae subsp. pneumoniae HS11286 0.00 4 4 S2 1308539 Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 0.00 3 3 S2 484021 Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 0.00 2 2 S2 1225181 Klebsiella pneumoniae subsp. pneumoniae KPNIH24 0.00 1 1 S2 1392499 Klebsiella pneumoniae subsp. pneumoniae 1158 0.00 1 1 S2 1406314 Klebsiella pneumoniae subsp. pneumoniae PittNDM01 0.01 368 368 S1 1328373 Klebsiella pneumoniae MGH 39 0.01 212 0 S1 39831 Klebsiella pneumoniae subsp. rhinoscleromatis 0.01 212 212 S2 861365 Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 0.00 54 54 S1 1365186 Klebsiella pneumoniae KP-1 0.00 43 43 S1 1049565 Klebsiella pneumoniae KCTC 2242 0.00 22 22 S1 574 Klebsiella pneumoniae subsp. ozaenae 0.00 6 6 S1 1304922 Klebsiella pneumoniae 500_1420 0.00 4 4 S1 1392500 Klebsiella pneumoniae HK787 0.00 2 2 S1 1244085 Klebsiella pneumoniae CG43 0.00 2 2 S1 1284804 Klebsiella pneumoniae UHKPC07 0.00 2 2 S1 1420013 Klebsiella pneumoniae 30684/NJST258_2 0.00 1 1 S1 1284798 Klebsiella pneumoniae DMC1097 0.19 4879 4808 S 244366 Klebsiella variicola 0.00 71 71 S1 640131 Klebsiella variicola At-22 0.13 3374 3373 S 548 Klebsiella aerogenes 0.00 1 1 S1 935296 Klebsiella aerogenes EA1509E 0.12 3014 3014 S 571 Klebsiella oxytoca 0.09 2408 2408 S 2026240 Klebsiella quasivariicola 0.08 2076 1951 S 1134687 Klebsiella michiganensis 0.00 104 104 S1 1308980 Klebsiella michiganensis HKOPL1 0.00 21 21 S1 1006551 Klebsiella michiganensis KCTC 1686 0.08 1987 535 G1 2608929 unclassified Klebsiella 0.02 544 544 S 2015795 Klebsiella sp. LY 0.02 442 442 S 2681387 Klebsiella sp. STW0522-44 0.01 168 168 S 2787706 Klebsiella sp. BDA134-6 0.00 127 127 S 2267618 Klebsiella sp. P1CD1 0.00 56 56 S 2675710 Klebsiella sp. WP3-W18-ESBL-02 0.00 40 40 S 1905288 Klebsiella sp. LTGPAF-6F 0.00 37 37 S 2675726 Klebsiella sp. WP8-S18-ESBL-06 0.00 19 19 S 2675713 Klebsiella sp. WP4-W18-ESBL-05 0.00 12 12 S 2488567 Klebsiella sp. FDAARGOS_511 0.00 4 4 S 2697371 Klebsiella sp. MPUS7 0.00 2 2 S 2675711 Klebsiella sp. WP3-S18-ESBL-05 0.00 1 1 S 2742651 Klebsiella sp. RHBSTW-00484 0.07 1835 1835 S 2489010 Klebsiella africana 0.05 1287 1287 S 2058152 Klebsiella grimontii 0.02 542 542 S 2153354 Klebsiella huaxiensis 7.09 182360 311 G 561 Escherichia 7.06 181539 113835 S 562 Escherichia coli 2.62 67329 67329 S1 2773707 Escherichia coli O19:H7 0.01 198 0 S1 1603259 Escherichia coli O139:H28 0.01 198 198 S2 331111 Escherichia coli O139:H28 str. E24377A 0.00 36 36 S1 2822132 Escherichia coli O128ac:H12 0.00 31 30 S1 83334 Escherichia coli O157:H7 0.00 1 1 S2 444450 Escherichia coli O157:H7 str. EC4115 0.00 29 29 S1 1392854 Escherichia coli M8 0.00 15 15 S1 409438 Escherichia coli SE11 0.00 12 12 S1 2810408 Escherichia coli O176:H45 0.00 10 10 S1 168927 Escherichia coli O111:H- 0.00 7 7 S1 2027293 Escherichia coli O8:H8 0.00 6 6 S1 2810404 Escherichia coli O7:H4 0.00 3 3 S1 83333 Escherichia coli K-12 0.00 3 3 S1 655817 Escherichia coli ABU 83972 0.00 2 2 S1 1446746 Escherichia coli O6:H16 0.00 2 0 S1 861906 Escherichia coli O44:H18 0.00 2 2 S2 216592 Escherichia coli 042 0.00 2 2 S1 941322 Escherichia coli O25b:H4-ST131 0.00 2 2 S1 405955 Escherichia coli APEC O1 0.00 2 2 S1 316435 Escherichia coli Nissle 1917 0.00 1 1 S1 696406 Escherichia coli UMNK88 0.00 1 1 S1 941323 Escherichia coli VR50 0.00 1 0 S1 1038927 Escherichia coli O104:H4 0.00 1 1 S2 1134782 Escherichia coli O104:H4 str. 2009EL-2050 0.00 1 1 S1 585057 Escherichia coli IAI39 0.00 1 1 S1 585397 Escherichia coli ED1a 0.00 1 1 S1 1416674 Escherichia coli N37139PS 0.00 1 1 S1 595495 Escherichia coli KO11FL 0.00 1 1 S1 1055538 Escherichia coli O145 0.00 1 1 S1 2778653 Escherichia coli O112ab:H8 0.00 1 1 S1 2778655 Escherichia coli O167:H26 0.00 1 1 S1 2778656 Escherichia coli O20:H12 0.00 1 1 S1 1078032 Escherichia coli O45:H2 0.00 1 1 S1 183192 Escherichia coli O157:H- 0.00 1 1 S1 930406 Escherichia coli O157:H16 0.00 1 1 S1 244319 Escherichia coli O26:H11 0.02 487 487 S 564 Escherichia fergusonii 0.00 12 10 S 208962 Escherichia albertii 0.00 2 2 S1 1440052 Escherichia albertii KF1 0.00 8 8 S 1499973 Escherichia marmotae 0.00 3 0 G1 2608889 unclassified Escherichia 0.00 2 2 S 2044467 Escherichia sp. E4742 0.00 1 1 S 2725997 Escherichia sp. SCLE84 5.81 149355 35 G 547 Enterobacter 5.79 148852 520 G1 354276 Enterobacter cloacae complex 2.91 74706 74303 S 158836 Enterobacter hormaechei 0.01 193 193 S1 299766 Enterobacter hormaechei subsp. steigerwaltii 0.01 153 153 S1 1812934 Enterobacter hormaechei subsp. hoffmannii 0.00 57 57 S1 1296536 Enterobacter hormaechei subsp. xiangfangensis 2.84 73130 73128 S 550 Enterobacter cloacae 0.00 1 0 S1 69219 Enterobacter cloacae subsp. dissolvens 0.00 1 1 S2 1104326 Enterobacter cloacae subsp. dissolvens SDM 0.00 1 0 S1 336306 Enterobacter cloacae subsp. cloacae 0.00 1 1 S2 716541 Enterobacter cloacae subsp. cloacae ATCC 13047 0.01 325 325 S 1812935 Enterobacter roggenkampii 0.00 83 81 S 61645 Enterobacter asburiae 0.00 2 2 S1 1421338 Enterobacter asburiae L1 0.00 53 53 S 208224 Enterobacter kobei 0.00 23 12 G2 2757714 unclassified Enterobacter cloacae complex 0.00 10 10 S 2027919 Enterobacter cloacae complex sp. 0.00 1 1 S 2077136 Enterobacter cloacae complex sp. FDA-CDC-AR_0164 0.00 4 4 S 69218 Enterobacter cancerogenus 0.00 4 4 S 299767 Enterobacter ludwigii 0.00 4 4 S 2494701 Enterobacter chengduensis 0.02 389 0 G1 2608935 unclassified Enterobacter 0.01 202 202 S 2596949 Enterobacter sp. E76 0.00 125 125 S 211595 Enterobacter sp. RFL1396 0.00 13 13 S 2565914 Enterobacter sp. 18A13 0.00 11 11 S 1166130 Enterobacter sp. R4-368 0.00 11 11 S 1914861 Enterobacter sp. SA187 0.00 7 7 S 2724468 Enterobacter sp. JUb54 0.00 4 4 S 2742676 Enterobacter sp. RHBSTW-00994 0.00 4 4 S 2500132 Enterobacter sp. N18-03635 0.00 3 3 S 399742 Enterobacter sp. 638 0.00 3 3 S 2742619 Enterobacter sp. RHB15-C17 0.00 3 3 S 2742639 Enterobacter sp. RHBSTW-00175 0.00 1 1 S 1868135 Enterobacter sp. HK169 0.00 1 1 S 2742656 Enterobacter sp. RHBSTW-00593 0.00 1 1 S 2705458 Enterobacter sp. SES19 0.00 67 67 S 539813 Enterobacter mori 0.00 7 7 S 881260 Enterobacter bugandensis 0.00 4 4 S 885040 Enterobacter soli 0.00 1 1 S 2478464 Enterobacter oligotrophicus 4.60 118371 129 G 544 Citrobacter 4.54 116745 27 G1 1344959 Citrobacter freundii complex 4.54 116592 116592 S 546 Citrobacter freundii 0.00 118 118 S 1639133 Citrobacter portucalensis 0.00 3 0 G2 2816438 unclassified Citrobacter freundii complex 0.00 1 1 S 2066049 Citrobacter freundii complex sp. CFNIH2 0.00 1 1 S 2077147 Citrobacter freundii complex sp. CFNIH3 0.00 1 1 S 2529121 Citrobacter sp. ABFQG 0.00 2 2 S 57706 Citrobacter braakii 0.00 2 2 S 133448 Citrobacter youngae 0.00 1 1 S 67827 Citrobacter werkmanii 0.06 1456 134 G1 2644389 unclassified Citrobacter 0.02 448 448 S 2742632 Citrobacter sp. RHBSTW-00053 0.01 253 253 S 2742665 Citrobacter sp. RHBSTW-00848 0.01 248 248 S 2742661 Citrobacter sp. RHBSTW-00678 0.01 207 207 S 2742638 Citrobacter sp. RHBSTW-00137 0.00 57 57 S 2742635 Citrobacter sp. RHBSTW-00107 0.00 44 44 S 2742663 Citrobacter sp. RHBSTW-00821 0.00 21 21 S 2546350 Citrobacter sp. LY-1 0.00 16 16 S 2742677 Citrobacter sp. RHBSTW-01013 0.00 6 6 S 1573676 Citrobacter sp. R56 0.00 4 4 S 1703250 Citrobacter sp. CRE-46 0.00 2 2 S 1036018 Citrobacter sp. 36-4CPA 0.00 2 2 S 2742671 Citrobacter sp. RHBSTW-00944 0.00 2 2 S 2742667 Citrobacter sp. RHBSTW-00881 0.00 2 2 S 2716879 Citrobacter sp. Y3 0.00 2 2 S 2683822 Citrobacter sp. 172116965 0.00 1 1 S 2742654 Citrobacter sp. RHBSTW-00535 0.00 1 1 S 2781952 Citrobacter sp. BDA59-3 0.00 1 1 S 2742675 Citrobacter sp. RHBSTW-00986 0.00 1 1 S 2742670 Citrobacter sp. RHBSTW-00903 0.00 1 1 S 1920110 Citrobacter sp. CFNIH10 0.00 1 1 S 2566012 Citrobacter sp. CF971 0.00 1 1 S 2742653 Citrobacter sp. RHBSTW-00524 0.00 1 1 S 2742626 Citrobacter sp. RHB35-C21 0.00 28 0 S 67825 Citrobacter rodentium 0.00 28 28 S1 637910 Citrobacter rodentium ICC168 0.00 4 4 S 545 Citrobacter koseri 0.00 4 0 S 35703 Citrobacter amalonaticus 0.00 4 4 S1 1261127 Citrobacter amalonaticus Y19 0.00 3 3 S 2653932 Citrobacter telavivum 0.00 1 1 S 67824 Citrobacter farmeri 0.00 1 1 S 1748967 Citrobacter cronae 0.14 3686 4 G 590 Salmonella 0.10 2559 451 S 28901 Salmonella enterica 0.08 2053 209 S1 59201 Salmonella enterica subsp. enterica 0.02 640 638 S2 90371 Salmonella enterica subsp. enterica serovar Typhimurium 0.00 1 1 S3 568708 Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 0.00 1 1 S3 1008297 Salmonella enterica subsp. enterica serovar Typhimurium str. 798 0.02 443 442 S2 28150 Salmonella enterica subsp. enterica serovar Senftenberg 0.00 1 1 S3 1399047 Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 0.01 335 335 S2 119912 Salmonella enterica subsp. enterica serovar Choleraesuis 0.00 127 127 S2 1160769 Salmonella enterica subsp. enterica serovar Worthington 0.00 76 76 S2 2583588 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 0.00 48 4 S2 108619 Salmonella enterica subsp. enterica serovar Newport 0.00 42 42 S3 1454627 Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 0.00 2 2 S3 877468 Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 0.00 38 38 S2 340189 Salmonella enterica subsp. enterica serovar Manhattan 0.00 22 22 S2 487004 Salmonella enterica subsp. enterica serovar Uganda 0.00 18 18 S2 1151001 Salmonella enterica subsp. enterica serovar Napoli 0.00 16 16 S2 596 Salmonella enterica subsp. enterica serovar Muenchen 0.00 10 10 S2 149391 Salmonella enterica subsp. enterica serovar Braenderup 0.00 7 2 S2 58096 Salmonella enterica subsp. enterica serovar Bareilly 0.00 4 4 S3 1182172 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000661 0.00 1 1 S3 1182177 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 0.00 7 7 S2 286783 Salmonella enterica subsp. enterica serovar Indiana 0.00 5 2 S2 115981 Salmonella enterica subsp. enterica serovar Montevideo 0.00 2 2 S3 763921 Salmonella enterica subsp. enterica serovar Montevideo str. 42N 0.00 1 1 S3 1454598 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1901 0.00 5 5 S2 98360 Salmonella enterica subsp. enterica serovar Dublin 0.00 4 4 S2 2021403 Salmonella enterica subsp. enterica serovar Adjame 0.00 4 4 S2 90105 Salmonella enterica subsp. enterica serovar Saintpaul 0.00 4 3 S2 149539 Salmonella enterica subsp. enterica serovar Enteritidis 0.00 1 1 S3 1412501 Salmonella enterica subsp. enterica serovar Enteritidis str. SA19940857 0.00 3 3 S2 29474 Salmonella enterica subsp. enterica serovar California 0.00 3 3 S2 600 Salmonella enterica subsp. enterica serovar Thompson 0.00 3 2 S2 611 Salmonella enterica subsp. enterica serovar Heidelberg 0.00 1 1 S3 1160717 Salmonella enterica subsp. enterica serovar Heidelberg str. B182 0.00 2 2 S2 192955 Salmonella enterica subsp. enterica serovar Kentucky 0.00 2 2 S2 593905 Salmonella enterica subsp. enterica serovar Corvallis 0.00 2 2 S2 57743 Salmonella enterica subsp. enterica serovar Weltevreden 0.00 2 2 S2 1962641 Salmonella enterica subsp. enterica serovar Birkenhead 0.00 2 2 S2 28144 Salmonella enterica subsp. enterica serovar Derby 0.00 2 2 S2 2579247 Salmonella enterica subsp. enterica serovar Rough O:-:- 0.00 2 2 S2 594 Salmonella enterica subsp. enterica serovar Gallinarum 0.00 1 1 S2 358771 Salmonella enterica subsp. enterica serovar Kedougou 0.00 1 0 S2 436295 Salmonella enterica subsp. enterica serovar Poona 0.00 1 1 S3 1124962 Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 0.00 1 1 S2 440524 Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 0.00 1 1 S2 595 Salmonella enterica subsp. enterica serovar Infantis 0.00 1 1 S2 913070 Salmonella enterica subsp. enterica serovar Gaminara 0.00 1 0 S2 913074 Salmonella enterica subsp. enterica serovar Inverness 0.00 1 1 S3 941187 Salmonella enterica subsp. enterica serovar Inverness str. ATCC 10720 0.00 1 1 S2 1160757 Salmonella enterica subsp. enterica serovar Lomita 0.00 1 1 S2 2564349 Salmonella enterica subsp. enterica serovar Dessau 0.00 1 1 S2 605 Salmonella enterica subsp. enterica serovar Pullorum 0.00 1 0 S2 58095 Salmonella enterica subsp. enterica serovar Agona 0.00 1 1 S3 454166 Salmonella enterica subsp. enterica serovar Agona str. SL483 0.00 1 0 S2 57046 Salmonella enterica subsp. enterica serovar Paratyphi C 0.00 1 1 S3 476213 Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 0.00 1 1 S2 70803 Salmonella enterica subsp. enterica serovar Minnesota 0.00 39 6 S1 59202 Salmonella enterica subsp. salamae 0.00 31 31 S2 2577858 Salmonella enterica subsp. salamae serovar 56:b:[1,5] 0.00 2 0 S2 1243601 Salmonella enterica subsp. salamae serovar 55:k:z39 0.00 2 2 S3 1243602 Salmonella enterica subsp. salamae serovar 55:k:z39 str. 1315K 0.00 6 6 S1 59203 Salmonella enterica subsp. arizonae 0.00 6 0 S1 59205 Salmonella enterica subsp. houtenae 0.00 4 4 S2 1299291 Salmonella enterica subsp. houtenae str. CFSAN000552 0.00 2 2 S2 523831 Salmonella enterica subsp. houtenae str. ATCC BAA-1581 0.00 3 0 S1 59208 Salmonella enterica subsp. VII 0.00 3 3 S2 41520 Salmonella enterica subsp. VII serovar 1,40:g,z51:-- 0.00 1 1 S1 59204 Salmonella enterica subsp. diarizonae 0.04 1119 0 G1 2614656 unclassified Salmonella 0.03 687 687 S 2500542 Salmonella sp. SSDFZ54 0.02 431 431 S 599 Salmonella sp. 0.00 1 1 S 2745895 Salmonella sp. SJTUF14178 0.00 4 2 S 54736 Salmonella bongori 0.00 2 2 S1 1299282 Salmonella bongori CFSAN000510 0.05 1240 52 G 160674 Raoultella 0.03 893 893 S 54291 Raoultella ornithinolytica 0.00 116 116 S 1259973 Raoultella electrica 0.00 97 97 S 575 Raoultella planticola 0.00 80 80 S 577 Raoultella terrigena 0.00 2 0 G1 2627600 unclassified Raoultella 0.00 1 1 S 2259647 Raoultella sp. X13 0.00 1 1 S 2799495 Raoultella sp. XY-1 0.03 715 17 G 1330547 Kosakonia 0.02 634 634 S 283686 Kosakonia radicincitans 0.00 35 0 G1 2632876 unclassified Kosakonia 0.00 33 33 S 2725560 Kosakonia sp. SMBL-WEM22 0.00 2 2 S 2492396 Kosakonia sp. CCTCC M2018092 0.00 23 23 S 497725 Kosakonia oryzae 0.00 2 1 S 208223 Kosakonia cowanii 0.00 1 1 S1 1300165 Kosakonia cowanii JCM 10956 = DSM 18146 0.00 2 2 S 1158459 Kosakonia sacchari 0.00 1 1 S 551989 Kosakonia arachidis 0.00 1 1 S 1646340 Kosakonia pseudosacchari 0.01 296 7 G 83654 Leclercia 0.01 193 1 G1 2627398 unclassified Leclercia 0.01 181 181 S 2815358 Leclercia sp. 4-9-1-25 0.00 3 3 S 2282310 Leclercia sp. W6 0.00 3 3 S 2681308 Leclercia sp. 119287 0.00 3 3 S 2714951 Leclercia sp. 29361 0.00 1 1 S 1920114 Leclercia sp. LSNIH1 0.00 1 1 S 2681307 Leclercia sp. J807 0.00 96 96 S 83655 Leclercia adecarboxylata 0.01 247 1 G 620 Shigella 0.01 227 221 S 621 Shigella boydii 0.00 4 4 S1 300268 Shigella boydii Sb227 0.00 2 2 S1 344609 Shigella boydii CDC 3083-94 0.00 12 9 S 623 Shigella flexneri 0.00 3 0 S1 42897 Shigella flexneri 2a 0.00 3 3 S2 198214 Shigella flexneri 2a str. 301 0.00 4 3 S 622 Shigella dysenteriae 0.00 1 1 S1 300267 Shigella dysenteriae Sd197 0.00 3 3 S 624 Shigella sonnei 0.01 136 0 G 401618 Candidatus Riesia 0.01 136 136 S 428411 Candidatus Riesia pediculischaeffi 0.00 75 0 G 1330546 Pluralibacter 0.00 69 69 S 61647 Pluralibacter gergoviae 0.00 6 5 S 1334193 [Enterobacter] lignolyticus 0.00 1 1 S1 701347 [Enterobacter] lignolyticus SCF1 0.00 47 0 G 2815296 Jejubacter 0.00 47 47 S 2579935 Jejubacter calystegiae 0.00 42 5 G 413496 Cronobacter 0.00 26 22 S 28141 Cronobacter sakazakii 0.00 4 4 S1 956149 Cronobacter sakazakii SP291 0.00 3 0 S 413497 Cronobacter dublinensis 0.00 3 0 S1 413498 Cronobacter dublinensis subsp. dublinensis 0.00 3 3 S2 1159554 Cronobacter dublinensis subsp. dublinensis LMG 23823 0.00 3 2 S 413503 Cronobacter malonaticus 0.00 1 1 S1 1159491 Cronobacter malonaticus LMG 23826 0.00 3 0 S 535744 Cronobacter universalis 0.00 3 3 S1 1074000 Cronobacter universalis NCTC 9529 0.00 2 0 S 1163710 Cronobacter condimenti 0.00 2 2 S1 1073999 Cronobacter condimenti 1330 0.00 24 0 F1 191675 Enterobacteriaceae incertae sedis 0.00 24 1 F2 84563 ant, tsetse, mealybug, aphid, etc. endosymbionts 0.00 8 0 F3 146507 aphid secondary symbionts 0.00 4 4 S 1199245 secondary endosymbiont of Ctenarytaina eucalypti 0.00 3 0 G 568987 Candidatus Hamiltonella 0.00 3 1 S 138072 Candidatus Hamiltonella defensa 0.00 2 2 S1 672795 Candidatus Hamiltonella defensa (Bemisia tabaci) 0.00 1 1 S 134287 secondary endosymbiont of Heteropsylla cubana 0.00 5 0 G 1906657 Candidatus Doolittlea 0.00 5 5 S 1778262 Candidatus Doolittlea endobia 0.00 3 0 G 1906659 Candidatus Hoaglandella 0.00 3 3 S 1778263 Candidatus Hoaglandella endobia 0.00 3 0 G 1906661 Candidatus Gullanella 0.00 3 3 S 1070130 Candidatus Gullanella endobia 0.00 2 0 F3 199891 mealybug secondary endosymbionts 0.00 2 2 S 1835721 secondary endosymbiont of Trabutina mannipara 0.00 2 0 G 472825 Candidatus Purcelliella 0.00 2 2 S 472834 Candidatus Purcelliella pentastirinorum 0.00 21 2 G 158483 Cedecea 0.00 13 13 S 158822 Cedecea neteri 0.00 6 6 S 158823 Cedecea lapagei 0.00 16 0 G 579 Kluyvera 0.00 7 7 S 61648 Kluyvera intermedia 0.00 5 5 S 580 Kluyvera cryocrescens 0.00 4 4 S 2774055 Kluyvera genomosp. 3 0.00 15 0 G 1330545 Lelliottia 0.00 9 9 S 61646 Lelliottia amnigena 0.00 4 0 G1 2642424 unclassified Lelliottia 0.00 4 4 S 2153385 Lelliottia sp. WB101 0.00 2 2 S 69220 Lelliottia nimipressuralis 0.00 11 0 G 2055876 Metakosakonia 0.00 11 0 G1 2639707 unclassified Metakosakonia 0.00 11 11 S 2487150 Metakosakonia sp. MRY16-398 0.00 7 0 G 2726810 Scandinavium 0.00 7 7 S 1851514 Scandinavium goeteborgense 0.00 6 3 F1 36866 unclassified Enterobacteriaceae 0.00 1 1 S 2675795 Enterobacteriaceae endosymbiont of Plateumaris pusilla 0.00 1 1 S 2675790 Enterobacteriaceae endosymbiont of Macroplea appendiculata 0.00 1 1 S 2675787 Enterobacteriaceae endosymbiont of Donacia tomentosa 0.00 6 2 G 82976 Buttiauxella 0.00 3 0 G1 2634062 unclassified Buttiauxella 0.00 3 3 S 2479367 Buttiauxella sp. 3AFRM03 0.00 1 1 S 82977 Buttiauxella agrestis 0.00 6 0 G 1335483 Shimwellia 0.00 6 6 S 563 Shimwellia blattae 0.00 4 0 G 447792 Phytobacter 0.00 4 4 S 1972431 Phytobacter ursingii 0.00 3 0 G 1048757 Candidatus Moranella 0.00 3 3 S 1048758 Candidatus Moranella endobia 0.00 3 0 G 1903434 Atlantibacter 0.00 3 3 S 565 Atlantibacter hermannii 0.00 3 0 G 2055880 Pseudescherichia 0.00 3 3 S 566 Pseudescherichia vulneris 0.00 2 0 G 158876 Yokenella 0.00 2 2 S 158877 Yokenella regensburgei 0.01 314 2 F 1903409 Erwiniaceae 0.01 170 1 G 82986 Tatumella 0.01 163 0 G1 2649542 unclassified Tatumella 0.01 163 163 S 2487345 Tatumella sp. TA1 0.00 4 4 S 642227 Tatumella morbirosei 0.00 2 2 S 82987 Tatumella ptyseos 0.00 77 6 G 551 Erwinia 0.00 32 0 G1 2622719 unclassified Erwinia 0.00 32 32 S 215689 Erwinia sp. Ejp617 0.00 18 15 S 552 Erwinia amylovora 0.00 1 1 S1 665029 Erwinia amylovora CFBP1430 0.00 1 1 S1 889211 Erwinia amylovora ATCC BAA-2158 0.00 1 1 S1 1407064 Erwinia amylovora LA637 0.00 9 0 S 338565 Erwinia tasmaniensis 0.00 9 9 S1 465817 Erwinia tasmaniensis Et1/99 0.00 7 2 S 79967 Erwinia pyrifoliae 0.00 5 5 S1 634499 Erwinia pyrifoliae Ep1/96 0.00 4 4 S 1922217 Candidatus Erwinia haradaeae 0.00 1 1 S 55211 Erwinia persicina 0.00 59 0 G 53335 Pantoea 0.00 30 30 S 553 Pantoea ananatis 0.00 13 0 S 66269 Pantoea stewartii 0.00 13 0 S1 66271 Pantoea stewartii subsp. stewartii 0.00 13 13 S2 660596 Pantoea stewartii subsp. stewartii DC283 0.00 7 0 G1 2630326 unclassified Pantoea 0.00 2 2 S 592316 Pantoea sp. At-9b 0.00 2 2 S 2052056 Pantoea sp. MSR2 0.00 2 2 S 2575375 Pantoea sp. SO10 0.00 1 1 S 2490851 Pantoea sp. CCBC3-3-1 0.00 3 3 S 470934 Pantoea vagans 0.00 3 0 G1 1654067 Pantoea agglomerans group 0.00 3 3 S 549 Pantoea agglomerans 0.00 1 1 S 55209 Pantoea cypripedii 0.00 1 1 S 59814 Pantoea dispersa 0.00 1 1 S 1891675 Pantoea alhagi 0.00 3 0 G 32199 Buchnera 0.00 3 0 S 9 Buchnera aphidicola 0.00 1 1 S1 98785 Buchnera aphidicola (Aphis gossypii) 0.00 1 0 S1 135842 Buchnera aphidicola (Baizongia pistaciae) 0.00 1 1 S2 224915 Buchnera aphidicola str. Bp (Baizongia pistaciae) 0.00 1 1 S1 1878935 Buchnera aphidicola (Cinara confinis) 0.00 3 0 G 2100764 Mixta 0.00 2 2 S 1615494 Mixta intestinalis 0.00 1 1 S 1458355 Mixta theicola 0.01 279 2 F 1903411 Yersiniaceae 0.01 158 6 G 613 Serratia 0.00 126 126 S 615 Serratia marcescens 0.00 9 6 S 138074 Serratia symbiotica 0.00 3 3 S1 568817 Serratia symbiotica str. 'Cinara cedri' 0.00 6 0 G1 2647522 unclassified Serratia 0.00 3 3 S 2785630 Serratia sp. CMO1 0.00 2 2 S 1327989 Serratia sp. FS14 0.00 1 1 S 2773264 Serratia sp. Tan611 0.00 4 4 S 28151 Serratia proteamaculans 0.00 2 2 S 614 Serratia liquefaciens 0.00 2 2 S 47917 Serratia fonticola 0.00 1 1 S 61652 Serratia rubidaea 0.00 1 0 S 82996 Serratia plymuthica 0.00 1 1 S1 1006598 Serratia plymuthica RVH1 0.00 1 1 S 137545 Serratia quinivorans 0.00 58 5 G 629 Yersinia 0.00 24 0 G1 1649845 Yersinia pseudotuberculosis complex 0.00 17 0 S 633 Yersinia pseudotuberculosis 0.00 17 0 S1 109458 Yersinia pseudotuberculosis (type O:1b) 0.00 17 17 S2 748672 Yersinia pseudotuberculosis str. PA3606 0.00 7 2 S 632 Yersinia pestis 0.00 2 2 S1 1345702 Yersinia pestis 2944 0.00 1 1 S1 360102 Yersinia pestis Antiqua 0.00 1 1 S1 1345707 Yersinia pestis 3770 0.00 1 1 S1 1035377 Yersinia pestis A1122 0.00 20 20 S 28152 Yersinia kristensenii 0.00 4 3 S 630 Yersinia enterocolitica 0.00 1 1 S1 150053 Yersinia enterocolitica subsp. palearctica 0.00 2 0 S 29484 Yersinia frederiksenii 0.00 2 2 S1 1454377 Yersinia frederiksenii Y225 0.00 1 1 S 263819 Yersinia aleksiciae 0.00 1 1 S 419257 Yersinia massiliensis 0.00 1 1 S 2339259 Yersinia hibernica 0.00 54 1 G 34037 Rahnella 0.00 42 0 G1 2635087 unclassified Rahnella 0.00 39 39 S 657334 Rahnella sp. WMR42 0.00 3 3 S 1805933 Rahnella sp. ERMR1:05 0.00 9 7 S 34038 Rahnella aquatilis 0.00 2 2 S1 1151116 Rahnella aquatilis HX2 0.00 2 2 S 2703885 Rahnella aceris 0.00 3 0 G 1927833 Candidatus Fukatsuia 0.00 3 3 S 1878942 Candidatus Fukatsuia symbiotica 0.00 2 0 G 1964366 Nissabacter 0.00 2 0 G1 2636213 unclassified Nissabacter 0.00 2 2 S 2126321 Nissabacter sp. SGAir0207 0.00 1 0 G 41201 Ewingella 0.00 1 1 S 41202 Ewingella americana 0.00 1 0 G 1565532 Rouxiella 0.00 1 1 S 1646377 Rouxiella badensis 0.00 105 0 F 1903412 Hafniaceae 0.00 54 0 G 568 Hafnia 0.00 53 53 S 569 Hafnia alvei 0.00 1 1 S 546367 Hafnia paralvei 0.00 49 14 G 635 Edwardsiella 0.00 30 30 S 1263550 Edwardsiella piscicida 0.00 1 1 S 636 Edwardsiella tarda 0.00 1 1 S 67780 Edwardsiella ictaluri 0.00 1 1 S 93378 Edwardsiella hoshinae 0.00 1 0 S 1821960 Edwardsiella anguillarum 0.00 1 1 S1 667120 Edwardsiella anguillarum ET080813 0.00 1 0 G1 2676541 unclassified Edwardsiella (in: Bacteria) 0.00 1 1 S 1578828 Edwardsiella sp. EA181011 0.00 2 0 G 82982 Obesumbacterium 0.00 2 2 S 82983 Obesumbacterium proteus 0.00 98 13 F 1903414 Morganellaceae 0.00 47 2 G 583 Proteus 0.00 43 43 S 584 Proteus mirabilis 0.00 2 2 S 585 Proteus vulgaris 0.00 14 1 G 586 Providencia 0.00 6 6 S 587 Providencia rettgeri 0.00 4 4 S 333962 Providencia heimbachae 0.00 2 0 G1 2633465 unclassified Providencia 0.00 2 2 S 2603246 Providencia sp. 1709051003 0.00 1 1 S 333965 Providencia vermicola 0.00 10 0 G 581 Morganella 0.00 10 10 S 582 Morganella morganii 0.00 9 0 G 626 Xenorhabdus 0.00 3 0 S 40577 Xenorhabdus poinarii 0.00 3 3 S1 1354304 Xenorhabdus poinarii G6 0.00 2 2 S 40576 Xenorhabdus bovienii 0.00 2 2 S 351671 Xenorhabdus doucetiae 0.00 1 1 S 628 Xenorhabdus nematophila 0.00 1 1 S 290110 Xenorhabdus budapestensis 0.00 4 1 G 637 Arsenophonus 0.00 1 1 S 638 Arsenophonus nasoniae 0.00 1 1 S 634113 Candidatus Arsenophonus lipoptenae 0.00 1 0 G1 2627083 unclassified Arsenophonus 0.00 1 1 S 235559 Arsenophonus endosymbiont of Aleurodicus dispersus 0.00 1 1 G 29487 Photorhabdus 0.00 48 2 F 1903410 Pectobacteriaceae 0.00 33 3 G 122277 Pectobacterium 0.00 19 19 S 2488639 Pectobacterium versatile 0.00 3 3 S 554 Pectobacterium carotovorum 0.00 2 2 S 29471 Pectobacterium atrosepticum 0.00 2 2 S 1905730 Pectobacterium parmentieri 0.00 2 2 S 2042057 Pectobacterium polaris 0.00 1 1 S 78398 Pectobacterium odoriferum 0.00 1 1 S 180957 Pectobacterium brasiliense 0.00 10 0 G 204037 Dickeya 0.00 3 3 S 69223 Dickeya paradisiaca 0.00 3 3 S 204042 Dickeya zeae 0.00 2 1 S 204038 Dickeya dadantii 0.00 1 1 S1 1224149 Dickeya dadantii NCPPB 3537 0.00 1 0 S 204039 Dickeya dianthicola 0.00 1 1 S1 1225780 Dickeya dianthicola IPO 980 0.00 1 1 S 1778540 Dickeya fangzhongdai 0.00 2 0 G 71655 Brenneria 0.00 1 1 S 55213 Brenneria rubrifaciens 0.00 1 1 S 1109412 Brenneria goodwinii 0.00 1 0 G 1082702 Lonsdalea 0.00 1 1 S 1082704 Lonsdalea britannica 0.00 5 0 F 2812006 Bruguierivoracaceae 0.00 5 1 G 84565 Sodalis 0.00 3 0 S 1486991 Candidatus Sodalis pierantonius 0.00 3 3 S1 2342 Candidatus Sodalis pierantonius str. SOPE 0.00 1 0 G1 2636512 unclassified Sodalis 0.00 1 1 S 1929246 Sodalis endosymbiont of Henestaris halophilus 0.00 2 0 F 1903416 Budviciaceae 0.00 1 0 G 82984 Pragia 0.00 1 1 S 82985 Pragia fontium 0.00 1 0 G 2810357 Jinshanibacter 0.00 1 1 S 2498113 Jinshanibacter zhutongyuii 0.00 1 0 O1 451511 Enterobacterales incertae sedis 0.00 1 0 G 702 Plesiomonas 0.00 1 1 S 703 Plesiomonas shigelloides 0.00 68 0 O 72274 Pseudomonadales 0.00 40 1 F 468 Moraxellaceae 0.00 37 7 G 469 Acinetobacter 0.00 10 0 G1 909768 Acinetobacter calcoaceticus/baumannii complex 0.00 10 9 S 470 Acinetobacter baumannii 0.00 1 1 S1 1279013 Acinetobacter baumannii PR07 0.00 7 5 S 40214 Acinetobacter johnsonii 0.00 2 2 S1 1242245 Acinetobacter johnsonii XBB1 0.00 4 0 G1 196816 unclassified Acinetobacter 0.00 2 2 S 2563897 Acinetobacter sp. 10FS3-1 0.00 1 1 S 2004647 Acinetobacter sp. WCHAc010052 0.00 1 1 S 2004644 Acinetobacter sp. WCHA45 0.00 2 2 S 28090 Acinetobacter lwoffii 0.00 2 2 S 106648 Acinetobacter bereziniae 0.00 1 1 S 756892 Acinetobacter indicus 0.00 1 1 S 1324350 Acinetobacter equi 0.00 1 1 S 202956 Acinetobacter towneri 0.00 1 1 S 70346 Acinetobacter variabilis 0.00 1 1 S 108981 Acinetobacter schindleri 0.00 2 1 G 475 Moraxella 0.00 1 1 S 34062 Moraxella osloensis 0.00 28 0 F 135621 Pseudomonadaceae 0.00 27 7 G 286 Pseudomonas 0.00 4 0 G1 136845 Pseudomonas putida group 0.00 3 2 S 303 Pseudomonas putida 0.00 1 1 S1 1331671 Pseudomonas putida H8234 0.00 1 0 S 47880 Pseudomonas fulva 0.00 1 1 S1 743720 Pseudomonas fulva 12-X 0.00 3 0 G1 136841 Pseudomonas aeruginosa group 0.00 2 1 S 287 Pseudomonas aeruginosa 0.00 1 1 S1 1400868 Pseudomonas aeruginosa VRFPA04 0.00 1 0 G2 1232139 Pseudomonas oleovorans/pseudoalcaligenes group 0.00 1 0 S 301 Pseudomonas oleovorans 0.00 1 1 S1 1182590 Pseudomonas pseudoalcaligenes CECT 5344 0.00 2 2 S 198618 Pseudomonas umsongensis 0.00 2 0 G1 196821 unclassified Pseudomonas 0.00 1 1 S 1659194 Pseudomonas sp. GR 6-02 0.00 1 1 S 2774873 Pseudomonas sp. ADPe 0.00 2 0 G1 136842 Pseudomonas chlororaphis group 0.00 2 1 S 587753 Pseudomonas chlororaphis 0.00 1 0 S1 587851 Pseudomonas chlororaphis subsp. aureofaciens 0.00 1 1 S2 1038921 Pseudomonas chlororaphis subsp. aureofaciens 30-84 0.00 2 0 G1 136843 Pseudomonas fluorescens group 0.00 1 1 S 200450 Pseudomonas trivialis 0.00 1 1 S 294 Pseudomonas fluorescens 0.00 2 0 G1 136846 Pseudomonas stutzeri group 0.00 2 0 G2 578833 Pseudomonas stutzeri subgroup 0.00 2 2 S 316 Pseudomonas stutzeri 0.00 1 1 S 47884 Pseudomonas taetrolens 0.00 1 1 S 1148509 Pseudomonas prosekii 0.00 1 1 S 244566 Pseudomonas lurida 0.00 1 0 G 1849530 Oblitimonas 0.00 1 1 S 1697053 Oblitimonas alkaliphila 0.00 30 0 O 135624 Aeromonadales 0.00 30 0 F 84642 Aeromonadaceae 0.00 30 4 G 642 Aeromonas 0.00 9 9 S 651 Aeromonas media 0.00 7 7 S 648 Aeromonas caviae 0.00 4 0 G1 257493 unclassified Aeromonas 0.00 3 3 S 1636609 Aeromonas sp. ASNIH4 0.00 1 1 S 1920107 Aeromonas sp. ASNIH7 0.00 2 1 S 645 Aeromonas salmonicida 0.00 1 0 S1 96473 Aeromonas salmonicida subsp. pectinolytica 0.00 1 1 S2 1324960 Aeromonas salmonicida subsp. pectinolytica 34mel 0.00 2 2 S 644 Aeromonas hydrophila 0.00 2 2 S 654 Aeromonas veronii 0.00 14 0 O 135614 Xanthomonadales 0.00 10 1 F 32033 Xanthomonadaceae 0.00 3 0 G 40323 Stenotrophomonas 0.00 2 0 G1 196198 unclassified Stenotrophomonas 0.00 1 1 S 2040586 Stenotrophomonas sp. Pemsol 0.00 1 1 S 2770322 Stenotrophomonas sp. 169 0.00 1 1 S 216778 Stenotrophomonas rhizophila 0.00 2 0 G 141948 Thermomonas 0.00 1 1 S 215691 Thermomonas brevis 0.00 1 1 S 1463158 Thermomonas carbonis 0.00 1 1 G 68 Lysobacter 0.00 1 0 G 2370 Xylella 0.00 1 1 S 2371 Xylella fastidiosa 0.00 1 0 G 83614 Luteimonas 0.00 1 0 G1 2629088 unclassified Luteimonas 0.00 1 1 S 1896164 Luteimonas sp. JM171 0.00 1 0 G 83618 Pseudoxanthomonas 0.00 1 1 S 128785 Pseudoxanthomonas mexicana 0.00 4 3 F 1775411 Rhodanobacteraceae 0.00 1 0 G 231454 Dyella 0.00 1 0 G1 2634549 unclassified Dyella 0.00 1 1 S 2763498 Dyella sp. G9 0.00 10 0 O 135623 Vibrionales 0.00 10 0 F 641 Vibrionaceae 0.00 10 0 G 662 Vibrio 0.00 3 3 S 666 Vibrio cholerae 0.00 1 1 S 672 Vibrio vulnificus 0.00 1 0 G1 2614977 unclassified Vibrio 0.00 1 1 S 2662262 Vibrio sp. SM1977 0.00 1 0 G1 717610 Vibrio harveyi group 0.00 1 1 S 696485 Vibrio owensii 0.00 1 1 S 76258 Vibrio rumoiensis 0.00 1 0 S 52443 Vibrio tapetis 0.00 1 1 S1 1671868 Vibrio tapetis subsp. tapetis 0.00 1 1 S 29494 Vibrio furnissii 0.00 1 1 S 28173 Vibrio nigripulchritudo 0.00 9 0 O 135625 Pasteurellales 0.00 9 1 F 712 Pasteurellaceae 0.00 3 0 G 214906 Histophilus 0.00 3 3 S 731 Histophilus somni 0.00 2 0 G 724 Haemophilus 0.00 2 2 S 730 [Haemophilus] ducreyi 0.00 1 0 G 2094023 Glaesserella 0.00 1 1 S 738 Glaesserella parasuis 0.00 1 0 G 292486 Avibacterium 0.00 1 1 S 728 Avibacterium paragallinarum 0.00 1 0 G 155493 Gallibacterium 0.00 1 0 S 750 Gallibacterium anatis 0.00 1 1 S1 1005058 Gallibacterium anatis UMN179 0.00 8 1 O 135622 Alteromonadales 0.00 3 0 F 267890 Shewanellaceae 0.00 3 0 G 22 Shewanella 0.00 2 0 G1 196818 unclassified Shewanella 0.00 1 1 S 60481 Shewanella sp. MR-7 0.00 1 1 S 94122 Shewanella sp. ANA-3 0.00 1 0 S 62322 Shewanella baltica 0.00 1 1 S1 402882 Shewanella baltica OS185 0.00 2 0 F 72275 Alteromonadaceae 0.00 1 0 G 2742 Marinobacter 0.00 1 0 G1 83889 unclassified Marinobacter 0.00 1 1 S 2304594 Marinobacter sp. Arc7-DN-1 0.00 1 0 G 1172191 Catenovulum 0.00 1 0 G1 2638362 unclassified Catenovulum 0.00 1 1 S 2172099 Catenovulum sp. CCB-QB4 0.00 1 0 F 267889 Colwelliaceae 0.00 1 0 G 1518149 Thalassotalea 0.00 1 1 S 1763536 Thalassotalea crassostreae 0.00 1 0 F 267892 Ferrimonadaceae 0.00 1 0 G 44011 Ferrimonas 0.00 1 1 S 2724191 Ferrimonas lipolytica 0.00 8 1 O 135619 Oceanospirillales 0.00 7 1 F 28256 Halomonadaceae 0.00 4 1 G 2745 Halomonas 0.00 3 0 G1 2609666 unclassified Halomonas 0.00 1 1 S 1118153 Halomonas sp. GFAJ-1 0.00 1 1 S 2587849 Halomonas sp. THAF12 0.00 1 1 S 2136172 Halomonas sp. SF2003 0.00 1 0 F1 114403 Zymobacter group 0.00 1 0 G 33073 Zymobacter 0.00 1 1 S 33074 Zymobacter palmae 0.00 1 0 G 504090 Kushneria 0.00 1 1 S 157779 Kushneria marisflavi 0.00 4 0 O 135613 Chromatiales 0.00 4 0 F 1046 Chromatiaceae 0.00 4 0 G 1227 Nitrosococcus 0.00 4 4 S 1814290 Nitrosococcus wardiae 0.00 2 0 O 1706369 Cellvibrionales 0.00 1 0 F 1706372 Halieaceae 0.00 1 0 G 393661 Congregibacter 0.00 1 0 S 393662 Congregibacter litoralis 0.00 1 1 S1 314285 Congregibacter litoralis KT71 0.00 1 0 F 1706375 Spongiibacteraceae 0.00 1 0 G 630749 Spongiibacter 0.00 1 0 G1 2631504 unclassified Spongiibacter 0.00 1 1 S 1620392 Spongiibacter sp. IMCC21906 0.00 1 0 O 72273 Thiotrichales 0.00 1 0 F 135616 Piscirickettsiaceae 0.00 1 0 G 40222 Methylophaga 0.00 1 1 S 754477 Methylophaga frappieri 0.00 1 0 O 135618 Methylococcales 0.00 1 0 F 403 Methylococcaceae 0.00 1 0 G 416 Methylomonas 0.00 1 1 S 1538553 Methylomonas denitrificans 0.00 91 0 C 28211 Alphaproteobacteria 0.00 43 0 O 204457 Sphingomonadales 0.00 43 0 F 41297 Sphingomonadaceae 0.00 42 0 G 165695 Sphingobium 0.00 42 0 G1 2611147 unclassified Sphingobium 0.00 42 42 S 2565554 Sphingobium sp. PAMC28499 0.00 1 0 G 13687 Sphingomonas 0.00 1 0 G1 196159 unclassified Sphingomonas 0.00 1 1 S 2698679 Sphingomonas sp. C33 0.00 42 0 O 356 Hyphomicrobiales 0.00 29 0 F 41294 Bradyrhizobiaceae 0.00 25 0 G 1073 Rhodopseudomonas 0.00 25 25 S 1076 Rhodopseudomonas palustris 0.00 2 0 G 374 Bradyrhizobium 0.00 1 1 S 1437360 Bradyrhizobium erythrophlei 0.00 1 1 S 255045 Bradyrhizobium canariense 0.00 2 0 G 85413 Bosea 0.00 2 0 G1 2653178 unclassified Bosea 0.00 1 1 S 1792307 Bosea sp. PAMC 26642 0.00 1 1 S 1867715 Bosea sp. Tri-49 0.00 8 0 F 82115 Rhizobiaceae 0.00 6 1 F1 227290 Rhizobium/Agrobacterium group 0.00 4 1 G 379 Rhizobium 0.00 1 1 S 451876 Rhizobium rhizoryzae 0.00 1 1 S 648995 Rhizobium pusense 0.00 1 0 S 384 Rhizobium leguminosarum 0.00 1 0 S1 386 Rhizobium leguminosarum bv. trifolii 0.00 1 1 S2 754523 Rhizobium leguminosarum bv. trifolii WSM1689 0.00 1 0 G 357 Agrobacterium 0.00 1 0 G1 1183400 Agrobacterium tumefaciens complex 0.00 1 0 S 358 Agrobacterium tumefaciens 0.00 1 1 S1 311403 Agrobacterium radiobacter K84 0.00 2 0 F1 227292 Sinorhizobium/Ensifer group 0.00 2 0 G 28105 Sinorhizobium 0.00 1 0 G1 663276 Sinorhizobium fredii group 0.00 1 1 S 380 Sinorhizobium fredii 0.00 1 0 G1 2613772 unclassified Sinorhizobium 0.00 1 1 S 2613773 Sinorhizobium sp. BG8 0.00 2 0 F 119045 Methylobacteriaceae 0.00 2 0 G 407 Methylobacterium 0.00 1 1 S 269660 Methylobacterium brachiatum 0.00 1 0 G1 2615210 unclassified Methylobacterium 0.00 1 1 S 426117 Methylobacterium sp. 4-46 0.00 1 0 F 69277 Phyllobacteriaceae 0.00 1 0 G 68287 Mesorhizobium 0.00 1 0 G1 325217 unclassified Mesorhizobium 0.00 1 1 S 2493672 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 0.00 1 0 F 118882 Brucellaceae 0.00 1 0 F1 2826938 Brucella/Ochrobactrum group 0.00 1 0 G 234 Brucella 0.00 1 1 S 36855 Brucella canis 0.00 1 0 F 255475 Aurantimonadaceae 0.00 1 0 G 414371 Aureimonas 0.00 1 0 G1 2615206 unclassified Aureimonas 0.00 1 1 S 1349819 Aureimonas sp. AU20 0.00 4 0 O 204455 Rhodobacterales 0.00 4 0 F 31989 Rhodobacteraceae 0.00 1 0 G 204456 Gemmobacter 0.00 1 0 G1 2636157 unclassified Gemmobacter 0.00 1 1 S 2169400 Gemmobacter sp. HYN0069 0.00 1 0 G 60136 Sulfitobacter 0.00 1 1 S 60137 Sulfitobacter pontiacus 0.00 1 0 G 97050 Ruegeria 0.00 1 0 S 89184 Ruegeria pomeroyi 0.00 1 1 S1 246200 Ruegeria pomeroyi DSS-3 0.00 1 0 G 302485 Phaeobacter 0.00 1 1 S 221822 Phaeobacter inhibens 0.00 1 0 O 204441 Rhodospirillales 0.00 1 0 F 41295 Rhodospirillaceae 0.00 1 0 G 1081 Rhodospirillum 0.00 1 1 S 1085 Rhodospirillum rubrum 0.00 1 0 O 1921002 Holosporales 0.00 1 0 F 44746 Holosporaceae 0.00 1 0 G 2601651 Candidatus Nesciobacter 0.00 1 1 S 2601668 Candidatus Nesciobacter abundans 0.00 24 1 C 28216 Betaproteobacteria 0.00 20 1 O 80840 Burkholderiales 0.00 9 0 F 119060 Burkholderiaceae 0.00 4 1 G 32008 Burkholderia 0.00 1 1 S 28095 Burkholderia gladioli 0.00 1 0 G1 87882 Burkholderia cepacia complex 0.00 1 1 S 95486 Burkholderia cenocepacia 0.00 1 0 G1 111527 pseudomallei group 0.00 1 1 S 57975 Burkholderia thailandensis 0.00 2 1 G 48736 Ralstonia 0.00 1 1 S 305 Ralstonia solanacearum 0.00 2 0 G 106589 Cupriavidus 0.00 1 1 S 119219 Cupriavidus metallidurans 0.00 1 1 S 164546 Cupriavidus taiwanensis 0.00 1 0 G 1822464 Paraburkholderia 0.00 1 0 S 252970 Paraburkholderia phenoliruptrix 0.00 1 1 S1 1229205 Paraburkholderia phenoliruptrix BR3459a 0.00 4 0 F 80864 Comamonadaceae 0.00 2 0 G 34072 Variovorax 0.00 1 1 S 34073 Variovorax paradoxus 0.00 1 0 G1 663243 unclassified Variovorax 0.00 1 1 S 434014 Variovorax sp. PBL-E5 0.00 1 0 G 12916 Acidovorax 0.00 1 0 G1 2684926 unclassified Acidovorax 0.00 1 1 S 2478662 Acidovorax sp. 1608163 0.00 1 0 G 1436289 Candidatus Symbiobacter 0.00 1 0 S 1436290 Candidatus Symbiobacter mobilis 0.00 1 1 S1 946483 Candidatus Symbiobacter mobilis CR 0.00 2 0 F 75682 Oxalobacteraceae 0.00 2 0 G 963 Herbaspirillum 0.00 1 0 S 341045 Herbaspirillum hiltneri 0.00 1 1 S1 1262470 Herbaspirillum hiltneri N3 0.00 1 1 S 863372 Herbaspirillum huttiense 0.00 2 0 O1 224471 Burkholderiales genera incertae sedis 0.00 1 0 G 316612 Methylibium 0.00 1 0 S 105560 Methylibium petroleiphilum 0.00 1 1 S1 420662 Methylibium petroleiphilum PM1 0.00 1 0 G 318147 Paucibacter 0.00 1 0 G1 2642959 unclassified Paucibacter 0.00 1 1 S 1768242 Paucibacter sp. KCTC 42545 0.00 1 0 F 506 Alcaligenaceae 0.00 1 0 G 152267 Pigmentiphaga 0.00 1 0 G1 2626614 unclassified Pigmentiphaga 0.00 1 1 S 2488560 Pigmentiphaga sp. H8 0.00 1 0 F 995019 Sutterellaceae 0.00 1 0 G 40544 Sutterella 0.00 1 1 S 40545 Sutterella wadsworthensis 0.00 2 0 O 206351 Neisseriales 0.00 2 0 F 1499392 Chromobacteriaceae 0.00 1 0 F1 90153 Chromobacterium group 0.00 1 0 G 535 Chromobacterium 0.00 1 1 S 2605945 Chromobacterium paludis 0.00 1 0 G 230666 Chitinibacter 0.00 1 0 G1 2619399 unclassified Chitinibacter 0.00 1 1 S 2739434 Chitinibacter sp. 2T18 0.00 1 0 C1 119066 Betaproteobacteria incertae sedis 0.00 1 0 G 327159 Candidatus Accumulibacter 0.00 1 0 S 327160 Candidatus Accumulibacter phosphatis 0.00 1 1 S1 522306 Candidatus Accumulibacter phosphatis clade IIA str. UW-1 0.00 9 0 P1 68525 delta/epsilon subdivisions 0.00 8 0 C 28221 Deltaproteobacteria 0.00 3 0 O 69541 Desulfuromonadales 0.00 3 0 F 213422 Geobacteraceae 0.00 3 0 G 28231 Geobacter 0.00 3 3 S 35554 Geobacter sulfurreducens 0.00 2 0 O 29 Myxococcales 0.00 2 0 O1 80811 Cystobacterineae 0.00 1 1 F 39 Archangiaceae 0.00 1 0 F 1524215 Anaeromyxobacteraceae 0.00 1 0 G 161492 Anaeromyxobacter 0.00 1 0 G1 2620896 unclassified Anaeromyxobacter 0.00 1 1 S 447217 Anaeromyxobacter sp. K 0.00 1 0 O 213115 Desulfovibrionales 0.00 1 0 F 194924 Desulfovibrionaceae 0.00 1 0 G 2035811 Pseudodesulfovibrio 0.00 1 0 S 182210 Pseudodesulfovibrio aespoeensis 0.00 1 1 S1 643562 Pseudodesulfovibrio aespoeensis Aspo-2 0.00 1 0 O 213118 Desulfobacterales 0.00 1 0 F 213119 Desulfobacteraceae 0.00 1 0 G 2289 Desulfobacter 0.00 1 1 S 2291 Desulfobacter hydrogenophilus 0.00 1 0 O 213462 Syntrophobacterales 0.00 1 0 F 213468 Syntrophaceae 0.00 1 0 G 2357 Desulfomonile 0.00 1 0 S 2358 Desulfomonile tiedjei 0.00 1 1 S1 706587 Desulfomonile tiedjei DSM 6799 0.00 1 0 C 29547 Epsilonproteobacteria 0.00 1 0 O 213849 Campylobacterales 0.00 1 0 F 72294 Campylobacteraceae 0.00 1 1 G 194 Campylobacter 0.00 65 0 D1 1783272 Terrabacteria group 0.00 40 1 P 1239 Firmicutes 0.00 37 0 C 91061 Bacilli 0.00 34 0 O 1385 Bacillales 0.00 29 0 F 90964 Staphylococcaceae 0.00 28 0 G 1279 Staphylococcus 0.00 26 26 S 1280 Staphylococcus aureus 0.00 2 2 S 29382 Staphylococcus cohnii 0.00 1 0 G 2803850 Mammaliicoccus 0.00 1 1 S 643214 Mammaliicoccus stepanovicii 0.00 4 0 F 186817 Bacillaceae 0.00 2 1 G 1386 Bacillus 0.00 1 1 S 1742359 Bacillus dafuensis 0.00 1 0 G 129337 Geobacillus 0.00 1 0 G1 2642459 unclassified Geobacillus 0.00 1 1 S 1963026 Geobacillus sp. 47C-IIb 0.00 1 0 G 150247 Anoxybacillus 0.00 1 1 S 33934 Anoxybacillus flavithermus 0.00 1 0 F 186822 Paenibacillaceae 0.00 1 0 G 44249 Paenibacillus 0.00 1 1 S 1406 Paenibacillus polymyxa 0.00 3 0 O 186826 Lactobacillales 0.00 2 0 F 33958 Lactobacillaceae 0.00 1 0 G 2767842 Lactiplantibacillus 0.00 1 1 S 1590 Lactiplantibacillus plantarum 0.00 1 0 G 2767887 Ligilactobacillus 0.00 1 0 S 1623 Ligilactobacillus ruminis 0.00 1 1 S1 1069534 Lactobacillus ruminis ATCC 27782 0.00 1 0 F 1300 Streptococcaceae 0.00 1 0 G 1357 Lactococcus 0.00 1 0 G1 2643510 unclassified Lactococcus 0.00 1 1 S 2592653 Lactococcus sp. KACC 19320 0.00 2 0 C 186801 Clostridia 0.00 1 0 O 186802 Eubacteriales 0.00 1 0 F 31979 Clostridiaceae 0.00 1 1 G 1485 Clostridium 0.00 1 0 O 2770089 Thermosediminibacterales 0.00 1 0 F 2770092 Tepidanaerobacteraceae 0.00 1 0 G 499228 Tepidanaerobacter 0.00 1 0 S 499229 Tepidanaerobacter acetatoxydans 0.00 1 1 S1 1209989 Tepidanaerobacter acetatoxydans Re1 0.00 22 0 P 201174 Actinobacteria 0.00 22 3 C 1760 Actinomycetia 0.00 5 0 O 85007 Corynebacteriales 0.00 3 0 F 1762 Mycobacteriaceae 0.00 1 0 G 1763 Mycobacterium 0.00 1 0 G1 2642494 unclassified Mycobacterium 0.00 1 1 S 2675524 Mycobacterium sp. DL592 0.00 1 0 G 1866885 Mycolicibacterium 0.00 1 1 S 1431246 Mycolicibacterium anyangense 0.00 1 0 G 2126281 Mycolicibacillus 0.00 1 1 S 1069220 Mycolicibacillus koreensis 0.00 1 0 F 1653 Corynebacteriaceae 0.00 1 0 G 1716 Corynebacterium 0.00 1 1 S 43770 Corynebacterium striatum 0.00 1 0 F 85025 Nocardiaceae 0.00 1 0 G 1827 Rhodococcus 0.00 1 1 S 1833 Rhodococcus erythropolis 0.00 5 0 O 85011 Streptomycetales 0.00 5 0 F 2062 Streptomycetaceae 0.00 5 0 G 1883 Streptomyces 0.00 5 0 G1 2593676 unclassified Streptomyces 0.00 1 1 S 2136173 Streptomyces sp. So13.3 0.00 1 1 S 2742136 Streptomyces sp. NA04227 0.00 1 1 S 1984801 Streptomyces sp. CLI2509 0.00 1 1 S 2305220 Streptomyces sp. W1SF4 0.00 1 1 S 2099583 Streptomyces sp. ICC1 0.00 3 0 O 85006 Micrococcales 0.00 1 0 F 85017 Promicromonosporaceae 0.00 1 1 G 157920 Cellulosimicrobium 0.00 1 0 F 2805426 Kytococcaceae 0.00 1 0 G 57499 Kytococcus 0.00 1 1 S 1276 Kytococcus sedentarius 0.00 1 0 F 85020 Dermabacteraceae 0.00 1 0 G 43668 Brachybacterium 0.00 1 0 G1 2623841 unclassified Brachybacterium 0.00 1 1 S 1903186 Brachybacterium sp. P6-10-X1 0.00 2 0 O 2037 Actinomycetales 0.00 2 0 F 2049 Actinomycetaceae 0.00 1 0 G 28263 Arcanobacterium 0.00 1 1 S 1302235 Arcanobacterium phocisimile 0.00 1 0 G 1069494 Trueperella 0.00 1 1 S 1661 Trueperella pyogenes 0.00 1 0 O 85004 Bifidobacteriales 0.00 1 0 F 31953 Bifidobacteriaceae 0.00 1 0 G 1678 Bifidobacterium 0.00 1 1 S 1685 Bifidobacterium breve 0.00 1 0 O 85008 Micromonosporales 0.00 1 0 F 28056 Micromonosporaceae 0.00 1 0 G 84593 Verrucosispora 0.00 1 0 G1 2630859 unclassified Verrucosispora 0.00 1 1 S 2742132 Verrucosispora sp. NA02020 0.00 1 0 O 85009 Propionibacteriales 0.00 1 0 F 85015 Nocardioidaceae 0.00 1 0 G 1839 Nocardioides 0.00 1 1 S 200618 Nocardioides aromaticivorans 0.00 1 0 O 2039638 Candidatus Nanopelagicales 0.00 1 0 F 2162846 Candidatus Nanopelagicaceae 0.00 1 0 G 622681 Candidatus Planktophila 0.00 1 1 S 1884904 Candidatus Planktophila sulfonica 0.00 3 0 D2 1798711 Cyanobacteria/Melainabacteria group 0.00 3 0 P 1117 Cyanobacteria 0.00 2 0 O 1890424 Synechococcales 0.00 1 0 F 1890438 Leptolyngbyaceae 0.00 1 0 G 47251 Leptolyngbya 0.00 1 0 G1 2650499 unclassified Leptolyngbya 0.00 1 1 S 1752064 Leptolyngbya sp. NIES-3755 0.00 1 0 F 2303730 Prochlorotrichaceae 0.00 1 0 G 170610 Halomicronema 0.00 1 0 S 1209493 Halomicronema hongdechloris 0.00 1 1 S1 1641165 Halomicronema hongdechloris C2206 0.00 1 0 O 1161 Nostocales 0.00 1 0 F 2661849 Calotrichaceae 0.00 1 0 G 1186 Calothrix 0.00 1 0 S 1973486 Calothrix parasitica 0.00 1 1 S1 1973488 Calothrix parasitica NIES-267 0.00 14 0 D1 1783270 FCB group 0.00 13 0 D2 68336 Bacteroidetes/Chlorobi group 0.00 13 0 P 976 Bacteroidetes 0.00 8 0 C 117743 Flavobacteriia 0.00 8 0 O 200644 Flavobacteriales 0.00 5 0 F 49546 Flavobacteriaceae 0.00 2 1 G 237 Flavobacterium 0.00 1 1 S 986 Flavobacterium johnsoniae 0.00 1 0 G 1016 Capnocytophaga 0.00 1 0 G1 2640652 unclassified Capnocytophaga 0.00 1 1 S 2748316 Capnocytophaga sp. oral taxon 902 0.00 1 0 G 326319 Dokdonia 0.00 1 0 G1 2615033 unclassified Dokdonia 0.00 1 1 S 2173169 Dokdonia sp. Dokd-P16 0.00 1 0 G 111500 Muricauda 0.00 1 1 S 516051 Muricauda lutaonensis 0.00 3 0 F 2762318 Weeksellaceae 0.00 2 1 F1 2782232 Chryseobacterium group 0.00 1 0 G 59732 Chryseobacterium 0.00 1 1 S 1324352 Chryseobacterium gallinarum 0.00 1 0 G 59734 Empedobacter 0.00 1 1 S 343874 Empedobacter falsenii 0.00 2 0 C 117747 Sphingobacteriia 0.00 2 0 O 200666 Sphingobacteriales 0.00 2 0 F 84566 Sphingobacteriaceae 0.00 1 0 G 28453 Sphingobacterium 0.00 1 1 S 561061 Sphingobacterium psychroaquaticum 0.00 1 0 G 423349 Mucilaginibacter 0.00 1 1 S 2740462 Mucilaginibacter mali 0.00 2 0 C 200643 Bacteroidia 0.00 2 0 O 171549 Bacteroidales 0.00 2 0 F 171552 Prevotellaceae 0.00 2 0 G 838 Prevotella 0.00 1 0 S 52227 Prevotella dentalis 0.00 1 1 S1 908937 Prevotella dentalis DSM 3688 0.00 1 0 G1 2638335 unclassified Prevotella 0.00 1 0 S 652716 Prevotella sp. oral taxon 299 0.00 1 1 S1 575614 Prevotella sp. oral taxon 299 str. F0039 0.00 1 0 C 1853228 Chitinophagia 0.00 1 0 O 1853229 Chitinophagales 0.00 1 0 F 563835 Chitinophagaceae 0.00 1 0 G 79328 Chitinophaga 0.00 1 1 S 79329 Chitinophaga pinensis 0.00 1 0 P 142182 Gemmatimonadetes 0.00 1 0 C 219685 Gemmatimonadetes 0.00 1 0 O 219686 Gemmatimonadales 0.00 1 0 F 219687 Gemmatimonadaceae 0.00 1 0 G 173479 Gemmatimonas 0.00 1 0 S 173480 Gemmatimonas aurantiaca 0.00 1 1 S1 379066 Gemmatimonas aurantiaca T-27 0.00 7 0 P 203691 Spirochaetes 0.00 7 0 C 203692 Spirochaetia 0.00 4 0 O 1643686 Brachyspirales 0.00 4 0 F 143786 Brachyspiraceae 0.00 4 0 G 29521 Brachyspira 0.00 4 0 S 84378 Brachyspira murdochii 0.00 4 4 S1 526224 Brachyspira murdochii DSM 12563 0.00 2 0 O 136 Spirochaetales 0.00 1 0 F 137 Spirochaetaceae 0.00 1 0 G 1616789 Salinispira 0.00 1 1 S 1307761 Salinispira pacifica 0.00 1 0 F 1643685 Borreliaceae 0.00 1 0 G 138 Borrelia 0.00 1 1 S 47466 Borrelia miyamotoi 0.00 1 0 O 1643688 Leptospirales 0.00 1 0 F 170 Leptospiraceae 0.00 1 0 G 171 Leptospira 0.00 1 1 S 28183 Leptospira santarosai 0.00 2 0 D1 1783257 PVC group 0.00 2 0 P 203682 Planctomycetes 0.00 2 0 C 203683 Planctomycetia 0.00 1 0 O 112 Planctomycetales 0.00 1 0 F 126 Planctomycetaceae 0.00 1 0 G 1649453 Gimesia 0.00 1 1 S 2605989 Gimesia chilikensis 0.00 1 0 O 2691356 Isosphaerales 0.00 1 0 F 1763524 Isosphaeraceae 0.00 1 0 G 2680020 Tautonia 0.00 1 1 S 2527974 Tautonia plasticadhaerens 0.00 1 0 D1 48479 environmental samples 0.00 1 1 S 558689 uncultured bacterium HHV35 0.03 807 0 D 2759 Eukaryota 0.03 807 0 D1 33154 Opisthokonta 0.03 807 0 K 33208 Metazoa 0.03 807 0 K1 6072 Eumetazoa 0.03 807 0 K2 33213 Bilateria 0.03 807 0 K3 33511 Deuterostomia 0.03 807 0 P 7711 Chordata 0.03 807 0 P1 89593 Craniata 0.03 807 0 P2 7742 Vertebrata 0.03 807 0 P3 7776 Gnathostomata 0.03 807 0 P4 117570 Teleostomi 0.03 807 0 P5 117571 Euteleostomi 0.03 807 0 P6 8287 Sarcopterygii 0.03 807 0 C 1338369 Dipnotetrapodomorpha 0.03 807 0 C1 32523 Tetrapoda 0.03 807 0 C2 32524 Amniota 0.03 807 0 C 40674 Mammalia 0.03 807 0 C1 32525 Theria 0.03 807 0 C2 9347 Eutheria 0.03 807 0 C3 1437010 Boreoeutheria 0.03 807 0 C4 314146 Euarchontoglires 0.03 807 0 O 9443 Primates 0.03 807 0 O1 376913 Haplorrhini 0.03 807 0 O2 314293 Simiiformes 0.03 807 0 O3 9526 Catarrhini 0.03 807 0 O4 314295 Hominoidea 0.03 807 0 F 9604 Hominidae 0.03 807 0 F1 207598 Homininae 0.03 807 0 G 9605 Homo 0.03 807 807 S 9606 Homo sapiens 0.00 26 0 R1 2787854 other entries 0.00 26 26 R2 28384 other sequences