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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
author public-health-bioinformatics
date Thu, 10 Mar 2022 21:59:56 +0000
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-1:000000000000 0:091a2fb2e7ad
1 <tool id="fastp_json_to_tabular" name="Convert fastp json report to tabular" version="0.1.0">
2 <description>Convert fastp json report to tabular</description>
3 <requirements>
4 </requirements>
5 <command detect_errors="exit_code"><![CDATA[
6 '$__tool_directory__/fastp_json_to_tabular.py'
7 ${report} > ${output}
8 ]]></command>
9 <inputs>
10 <param name="report" type="data" format="json" />
11 </inputs>
12 <outputs>
13 <data name="output" label="fastp report" format="tabular"/>
14 </outputs>
15 <tests>
16 <test>
17 <param name="report" value="test-01_fastp.json" />
18 <output name="output" file="test-01_fastp.tsv" ftype="tabular" />
19 </test>
20 <test>
21 <param name="report" value="test-02_fastp.json" />
22 <output name="output" file="test-02_fastp.tsv" ftype="tabular" />
23 </test>
24 <test>
25 <param name="report" value="test-03_fastp.json" />
26 <output name="output" file="test-03_fastp.tsv" ftype="tabular" />
27 </test>
28 </tests>
29 <help><![CDATA[
30 ]]></help>
31 <citations>
32 </citations>
33 </tool>