Mercurial > repos > public-health-bioinformatics > fastp_json_to_tabular
annotate fastp_json_to_tabular.xml @ 0:091a2fb2e7ad draft default tip
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
author | public-health-bioinformatics |
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date | Thu, 10 Mar 2022 21:59:56 +0000 |
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091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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1 <tool id="fastp_json_to_tabular" name="Convert fastp json report to tabular" version="0.1.0"> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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2 <description>Convert fastp json report to tabular</description> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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3 <requirements> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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4 </requirements> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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5 <command detect_errors="exit_code"><![CDATA[ |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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6 '$__tool_directory__/fastp_json_to_tabular.py' |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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7 ${report} > ${output} |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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8 ]]></command> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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9 <inputs> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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10 <param name="report" type="data" format="json" /> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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11 </inputs> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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12 <outputs> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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13 <data name="output" label="fastp report" format="tabular"/> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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14 </outputs> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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15 <tests> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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16 <test> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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17 <param name="report" value="test-01_fastp.json" /> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
parents:
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18 <output name="output" file="test-01_fastp.tsv" ftype="tabular" /> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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19 </test> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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20 <test> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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21 <param name="report" value="test-02_fastp.json" /> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
parents:
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22 <output name="output" file="test-02_fastp.tsv" ftype="tabular" /> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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23 </test> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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24 <test> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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25 <param name="report" value="test-03_fastp.json" /> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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26 <output name="output" file="test-03_fastp.tsv" ftype="tabular" /> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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27 </test> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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28 </tests> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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29 <help><![CDATA[ |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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30 ]]></help> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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31 <citations> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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32 </citations> |
091a2fb2e7ad
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/fastp_json_to_tabular commit 888d26702a84c2f8fd1428aff8cd869e94cc0bae"
public-health-bioinformatics
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33 </tool> |