Mercurial > repos > public-health-bioinformatics > match_plasmid_to_reference
annotate test-data/outdir/reference_plasmid.gbk @ 0:c917ef6807d7 draft default tip
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
author | public-health-bioinformatics |
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date | Tue, 12 Nov 2019 22:47:36 -0500 |
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c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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1 LOCUS JQ739157 6544 bp DNA circular BCT 26-JUL-2016 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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2 DEFINITION Acinetobacter pittii strain ABCA95 plasmid pABCA95, complete |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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3 sequence. |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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4 ACCESSION JQ739157 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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5 VERSION JQ739157.2 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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6 KEYWORDS . |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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7 SOURCE Acinetobacter pittii |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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8 ORGANISM Acinetobacter pittii |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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9 Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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10 Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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11 complex. |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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12 REFERENCE 1 (bases 1 to 6544) |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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13 AUTHORS Fu,Y., Du,X., Ji,J., Chen,Y., Jiang,Y. and Yu,Y. |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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14 TITLE Epidemiological characteristics and genetic structure of blaNDM-1 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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15 in non-baumannii Acinetobacter spp. in China |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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16 JOURNAL J. Antimicrob. Chemother. 67 (9), 2114-2122 (2012) |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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17 PUBMED 22604448 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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18 REFERENCE 2 (bases 1 to 6544) |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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19 AUTHORS Fu,Y., Du,X., Ji,J., Chen,Y., Jiang,Y. and Yu,Y. |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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20 TITLE Direct Submission |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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21 JOURNAL Submitted (05-MAR-2012) Department of Infectious Diseases, Sir Run |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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22 Run Shaw Hospital, Affiliated with School of Medicine, Zhejiang |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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23 University, 3 East Qingchun Road, Hangzhou, Zhejiang 310016, China |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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24 REFERENCE 3 (bases 1 to 6544) |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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25 AUTHORS Fu,Y., Du,X., Ji,J., Chen,Y., Jiang,Y. and Yu,Y. |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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26 TITLE Direct Submission |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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27 JOURNAL Submitted (12-MAY-2014) Department of Infectious Diseases, Sir Run |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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28 Run Shaw Hospital, Affiliated with School of Medicine, Zhejiang |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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29 University, 3 East Qingchun Road, Hangzhou, Zhejiang 310016, China |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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30 REMARK Sequence update by submitter |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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31 COMMENT On May 12, 2014 this sequence version replaced JQ739157.1. |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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32 FEATURES Location/Qualifiers |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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33 source 1..6544 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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34 /organism="Acinetobacter pittii" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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35 /mol_type="genomic DNA" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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36 /strain="ABCA95" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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37 /db_xref="taxon:48296" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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38 /plasmid="pABCA95" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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39 gene 375..1031 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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40 /gene="aphA6" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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41 misc_feature 375..1031 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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42 /gene="aphA6" |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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43 /note="similar to aphA6; aminoglycoside |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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44 3'-phosphotransferase; 5' end of gene is missing" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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45 mobile_element 1129..2215 |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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46 /mobile_element_type="insertion sequence:ISAba125" |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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47 repeat_region 1138..1154 |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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48 /note="IRL" |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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49 /rpt_type=inverted |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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50 CDS 1186..2211 |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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51 /codon_start=1 |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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52 /transl_table=11 |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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53 /product="Transposase" |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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54 /protein_id="AFK73837.1" |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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55 /translation="MEYIKLSYHHLNFEDRTALMLESRKEGFSARKFAELIKRHPSTI |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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56 YRELKRNSINDVYQARYASDNTFARRRRGHRKLKIDSILWKFIVEAIRCLWSPQQIAK |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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57 RLKTFPDLDQTMNVSHTTIYSTIRALPKGELKKDLLSCLRHENKKRKANGEPKKDSIL |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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58 QDIKTIHERPAEVQERKIPGHWEADLIKGKDNKSSIATLIERNTRLCILATLPDAKAE |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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59 SVRKALTEALKYLPAELRKTLTYDRGREMSEHKILEEDLGIDVYFCDPHSPWQKGTCE |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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60 NMNGLIRQYLPKGIDLNQADQHYLNQVAMSLNTRPRKALDWLTPLEKFAQLVDYHMAF |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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61 ETVAPHV" |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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62 repeat_region 2190..2206 |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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63 /note="IRL" |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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64 /rpt_type=inverted |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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65 gene 2312..3124 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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66 /gene="blaNDM-1" |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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67 CDS 2312..3124 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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68 /gene="blaNDM-1" |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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69 /codon_start=1 |
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"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
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70 /transl_table=11 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
71 /product="metallo-beta-lactamase" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
72 /protein_id="AFK73838.1" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
73 /translation="MELPNIMHPVAKLSTALAAALMLSGCMPGEIRPTIGQQMETGDQ |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
74 RFGDLVFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDGGRVLVVDTAWTDDQTAQIL |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
75 NWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEGMVAAQHS |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
76 LTFAANGWVEPATAPNFGPLKVFYPGPGHTSDNITVGIDGTDIAFGGCLIKDSKAKSL |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
77 GNLGDADTEHYAASARAFGAAFPKASMIVMSHSAPDSRAAITHTARMADKLR" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
78 gene 3128..3493 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
79 /gene="bleo" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
80 CDS 3128..3493 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
81 /gene="bleo" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
82 /note="involved in resistance to bleomycin" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
83 /codon_start=1 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
84 /transl_table=11 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
85 /product="bleomycin resistance protein" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
86 /protein_id="AFK73839.1" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
87 /translation="MADHVTPNLPSRDFDVTEAFYAKLGFATSWKDRGWMILQRGGLQ |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
88 LEFFPYPDLDPATSSFGCCLRLDDLDAMVALVNAAGAEEKSTGWPRFKAPQLEASGLR |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
89 IGYLIDPDCTLVRLIQNPD" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
90 gene 3498..4133 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
91 /gene="trpF" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
92 misc_feature 3498..4133 |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
93 /gene="trpF" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
94 /note="similar to TrpF; phosphoribosyl anthranilate |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
95 isomerase; 3' end not present" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
96 gene complement(4150..4830) |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
97 /gene="tat" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
98 misc_feature complement(4150..4830) |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
99 /gene="tat" |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
100 /note="similar to TAT; twin-arginine translocation pathway |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
101 signal sequence protein; 5' end of gene is missing." |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
102 ORIGIN |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
103 1 aagcttatag cagtgtcaca gatgcgaaaa agcaattaag tgcatatttt gagttttata |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
104 61 atttgaaacg acctcattcg agtctagaca aaatgacacc aaatgagttt tactatgatc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
105 121 agctacccca acaaaacaag gtggcttaac tagagcggaa tatcacttat aaatacgctt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
106 181 ttagttgttc aaacaagtgg gaccacctct ctcgcatttg cggggttttt aatgctgaat |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
107 241 aaaaggaaaa cttgatggaa ttgcccaata ttattcaaca atttattgga aacagcgttt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
108 301 tagagccaaa taaaattggt cagtcgccat cggatgttta ttcttttaat cgaaataatg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
109 361 aaactttttt tcttaagcga tctagcactt tatatacaga gaccacatac agtgtctctc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
110 421 gcgaagcgaa aatgttgagt tggctctctg agaaattaaa ggtgcctgaa ctcatcatga |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
111 481 cttttcagga tgagcagttt gaattaatga tcactaaagc gatcaatgca aaaccaattt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
112 541 cagcgctttt tttaacagac caagaattgc ttgctatcta taaggaggca ctcaatctgt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
113 601 taaattcagt tgctattatt gattgtccat ttatttcaaa cattgatcat cggttaaaag |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
114 661 agtcaaaatt ttttattgat aaccaactcc ttgacgatat agatcaagat gattttgacg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
115 721 ctgaattatg gggagaccat agaacttacc taagtctatg gaatgagtta actgagactc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
116 781 gtgttgaaga aagattggtt ttttctcatg gcgatatcac ggatagtaat atttttatag |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
117 841 ataaattcaa tgaaatttac tttttagatc ttggccgtgc tgggttagct gatgaatttg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
118 901 tagatatatc ctttgttgaa cgttgcctaa gagaggatgc ctcggaggaa actgctaaaa |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
119 961 tatttttaaa gcatttaaaa aatgatagac ctgacaaaag gaattatttt ttaaaacttg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
120 1021 atgaattgaa ttgattctaa gcattatcta aaaatactta attgtctttt aacgtcgcta |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
121 1081 aattttaaat aaataagtga agagtgttag tggagccact gatttaaagt tggcagagta |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
122 1141 aaacttgaag tgcgacataa accacctaat taatttaaag ggtttatgga gtatataaaa |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
123 1201 ttgtcatacc atcatcttaa ctttgaagat cgtactgcat taatgcttga gtcaagaaaa |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
124 1261 gaaggctttt cagccagaaa atttgctgaa ctcattaaaa gacatcctag tacgatctat |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
125 1321 cgtgagctta aaagaaatag catcaatgac gtttatcaag ctcgatatgc ttctgataac |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
126 1381 accttcgcta gacgtagacg tggtcacaga aaactcaaaa tcgattcaat cctctggaaa |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
127 1441 tttattgttg aagcgatccg ttgtttatgg tctcctcagc aaatagcaaa gcgtttaaag |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
128 1501 acatttcctg atttggatca aacaatgaat gtaagccata caacgattta ttcaacgata |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
129 1561 cgagcattac caaagggtga gttgaaaaaa gacttattat cctgtctacg tcatgaaaat |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
130 1621 aaaaagcgaa aagctaacgg tgaacctaaa aaagattcta tattacagga tattaaaact |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
131 1681 attcatgagc gcccagccga agttcaagaa agaaaaatac cgggtcattg ggaagctgat |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
132 1741 ttaattaaag gtaaagacaa taaaagttcg atagcaacac ttattgaacg aaatacacgg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
133 1801 ctctgtatct tggcaacatt acctgatgca aaggcagaat cagtgcgcaa ggctttaact |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
134 1861 gaagctctga aatatttacc tgcagaactg cgtaaaacgt tgacctatga ccgtggacgt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
135 1921 gagatgtcag aacataaaat actcgaagaa gatttaggca tagatgtata tttctgtgac |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
136 1981 ccacattcac cctggcaaaa aggcacatgc gaaaatatga atggtttaat taggcaatat |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
137 2041 ttacctaaag ggattgattt aaatcaggca gatcagcatt atttaaatca agttgccatg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
138 2101 tcactgaata ctcgtcctag aaaggcgtta gattggctta caccattaga gaaatttgct |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
139 2161 cagcttgttg attatcatat ggcttttgaa actgtcgcac ctcatgtttg aattcgcccc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
140 2221 atatttttgc tacagtgaac caaattaaga tcatctattt actaggcctc gcatttgcgg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
141 2281 ggtttttaat gctgaataaa aggaaaactt gatggaattg cccaatatta tgcacccggt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
142 2341 cgcgaagctg agcaccgcat tagccgctgc attgatgctg agcgggtgca tgcccggtga |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
143 2401 aatccgcccg acgattggcc agcaaatgga aactggcgac caacggtttg gcgatctggt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
144 2461 tttccgccag ctcgcaccga atgtctggca gcacacttcc tatctcgaca tgccgggttt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
145 2521 cggggcagtc gcttccaacg gtttgatcgt cagggatggc ggccgcgtgc tggtggtcga |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
146 2581 taccgcctgg accgatgacc agaccgccca gatcctcaac tggatcaagc aggagatcaa |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
147 2641 cctgccggtc gcgctggcgg tggtgactca cgcgcatcag gacaagatgg gcggtatgga |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
148 2701 cgcgctgcat gcggcgggga ttgcgactta tgccaatgcg ttgtcgaacc agcttgcccc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
149 2761 gcaagagggg atggttgcgg cgcaacacag cctgactttc gccgccaatg gctgggtcga |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
150 2821 accagcaacc gcgcccaact ttggcccgct caaggtattt taccccggcc ccggccacac |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
151 2881 cagtgacaat atcaccgttg ggatcgacgg caccgacatc gcttttggtg gctgcctgat |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
152 2941 caaggacagc aaggccaagt cgctcggcaa tctcggtgat gccgacactg agcactacgc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
153 3001 cgcgtcagcg cgcgcgtttg gtgcggcgtt ccccaaggcc agcatgatcg tgatgagcca |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
154 3061 ttccgccccc gatagccgcg ccgcaatcac tcatacggcc cgcatggccg acaagctgcg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
155 3121 ctgagccatg gctgaccacg tcacccccaa tctgccatcg cgcgatttcg atgtgacaga |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
156 3181 ggcgttttat gcgaagctgg gctttgcgac gagttggaag gatcgcggct ggatgatcct |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
157 3241 gcagcgcggc ggtttgcagc tcgaattctt cccctatcct gacctcgacc cagctacgag |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
158 3301 ctcgttcggc tgttgcctgc ggttggatga tctcgatgcc atggtggcat tggtgaacgc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
159 3361 ggcgggagcc gaggaaaaaa gcaccggctg gccgcgcttc aaagctccgc aactggaggc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
160 3421 gagcggcctg aggatcggct acctgatcga tcccgactgc acgctggtgc ggctgatcca |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
161 3481 gaaccccgac tgaccgcatg cccgcgaaaa tcaagatttg cgggatcagc acacccgagg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
162 3541 cgctcgatgc gaccatcgcg gcgcgggcgg actatgccgg gttggtgttc tatccagcgt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
163 3601 cgccccgtgc ggttacgtcg aatgtcgcgg gcgctttgac atcgcgcgca gctggccaga |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
164 3661 tcgccatggt cggtttgttc gtcgatgcgg atgatgctgt catcgccgac gcactggtgg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
165 3721 cagccaagct gaacgcgctg cagctgcacg gttcggaatc gcccgaacgc gtggcccagt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
166 3781 tgcgcgcgcg gtttggcaag ccggtgtgga aggcgctgcc cgtcgccagc gccagcgatg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
167 3841 tcgcacgcgc cgcagcctat gccggggcgg cggacttgat cttgttcgac gccaagaccc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
168 3901 ccaaaggcgc gctgcccggc ggcatggggt tggcgttcga ctggtcgctg ctggccggat |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
169 3961 atcgcggtgc cttgccgtgg gggctggcag gcgggctaaa tccgacgaat gttgccgagg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
170 4021 cgattgcgcg caccggagcg ccgctggtcg atacctccag cggcgtcgaa agcgcgccgg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
171 4081 gcgtcaagga taccgacaag attaccaatt tcgcctttgc ggtgcgcttg gcctaaatcg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
172 4141 cgtcgatcaa taggcgtcgt tcagcgcaaa gatcggcttg cgggtgcgcc actgccctcg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
173 4201 ggtgaagtcg ggaaaatcta acgtgcgatt gccctcagca atcgattgtt ccgacagagg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
174 4261 cgtgatcgcg ctccaggcca gcgcgtcgta aatgtcgatt ggcatcgggg ccttggcctt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
175 4321 cagcgcctcg acaaaagcgt ggatcacgaa ccagtccatc ccgccatgcc cggcccctgc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
176 4381 cgccagatcg gcgtagcgtt tccatagcgg gtgatcgtat ttcgcaaacc agccctcggc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
177 4441 aggctcccag cggtgcggct gtgggctctt gccctccaga tagatcgact tgttgacgtc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
178 4501 catccacagc ccctcggtgc cttgcacccg aaagccgaga gaataggggc gcggcagcga |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
179 4561 ggtgtcgtgg cacagcatga tcgtttcacc attagtgcag ccgatcatgg tgttgaccac |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
180 4621 atcacccagt gcgaatttca cctcggcgtt gggatgatcg gcagagccgt tcttgacgac |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
181 4681 ataatcatgc agcccgcgcg ccttacagcc gaagccgcca gcgcccgctt cgcccggcaa |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
182 4741 cgcgaccttc agggtgcggg tctgcggcgg gtagcacacg ccggcatcgg cgcagccctg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
183 4801 gtacttcacg gtcagggtgg tcgcgctcgc gccggccgcg ggcgtgccgg tgagggtgcc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
184 4861 gagcaattcc ttgcggtagg tttcgacgtc gccgaagaat tcgtcgcggt aggccttgcc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
185 4921 cttcggcagc gccatggtcg cgccggtgaa ggcggcatcg gccttgaccg aggtgcggtg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
186 4981 ccggtacagg taatagccgt cggcgatccg ccagcgcacc tcgatgcggt ccggcgcggt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
187 5041 ggcctgcgcg gacaggacga agacctcgtc gaccggcggc agttcgaagt cctgggcgac |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
188 5101 ggccgaggtc gcgggcagcg caagcagcag ggcgagcccg gccagccagc ggcgcaggcg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
189 5161 gatcgtggat gcggtcattg gctcagttta ccggtcggct ctcggcggcc agccattgca |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
190 5221 ggtattcggg caggccggac gcggcttcga ccgcgagcag ctccgggagt tcgtagggat |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
191 5281 atagtatttt attaaattct tatgggaaat gacgaatgtt aaattatctt aagagcttta |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
192 5341 ataatatcaa tacttatttg attttatcga taattctgct gttaatcata atatctctag |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
193 5401 attatttcta aactgaatga atgtttataa tgagtgattc atattgctat tgaaatcgcc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
194 5461 ttctcacttt gaaagaaggc gaggatgagg gacttttatg ttgaattatc attttaaaaa |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
195 5521 tgccttataa aagaagctta atgtgttttc ttatataggt ttaaacataa ttgttgtata |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
diff
changeset
|
196 5581 tcttaaatcc aattgatctt aaaattttcc tttatttttt gttatgagtg cgagaaaatt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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197 5641 gtcaaaaagg tcaatcagac tgggcgttaa tttgttttgc atactttttc ctatatcgaa |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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198 5701 ttaaagtcat ataactaaca ccataatctt tagctatttg agtgaaaggg tatgaatcgt |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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199 5761 ccttattttt aagggtatga attaactctt ttagtttttc ttctgtaatc gcaggcgatc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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200 5821 ttcccttgta tttacctttc ttttttttag ctaatttaat tccctctgct tgattctcac |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
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201 5881 taataatacc cctttcaagt tcagctacag cgcctaatac atggagttga aacttatcga |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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202 5941 acttgtcatc tgaattgggg gtaaagttca ggttattttt gacaatatga acagacactc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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203 6001 cttttttatt tagcttttga acaatggtta caaggtcaat caagctacgt gccaatctaa |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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204 6061 aaacatcatg agcgtacaca atgtccccac tacggacata atcgaacatt tcctgaagtg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
parents:
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205 6121 cagggcgttt ggcagtcttt ccgctaaaat gatcaataaa agttttatct agctcaaagg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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206 6181 gtagatcatg gagctgtctt tcagggtttt ggtctttagt ggatacacgg atatacccca |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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207 6241 ctctttgaaa gggtgtgttt ttaatttgat cttcaatatc taaattttct ttttccataa |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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208 6301 ccagtataac aaaattagat aacctcaatg ttatatcaca ttagattaac aaaacaaccc |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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diff
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209 6361 tattgttata gggtttttag ggtgtattat tatataacaa tagggtatac cctattgtta |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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diff
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210 6421 tatatcttca ggtataagga aaaataacga tgattaattt taatgatcta agcgaatctg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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211 6481 aattattaag gattgcacag actggcatat caaaccgtat aggattgcgt acttcaggac |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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212 6541 attg |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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213 // |
c917ef6807d7
"planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/tree/master/tools/match_plasmid_to_reference commit 0f3fff91eb329adf437224eb8f7449853083b01e"
public-health-bioinformatics
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214 |