Mercurial > repos > public-health-bioinformatics > tbprofiler_json_to_tabular

annotate test-data/test-01_resistance_variants.tsv @ 0:3e0d5ceeeb0f draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/tbprofiler_json_to_tabular commit 24535690aedb81353cf5e036dc4577022d9604ad
author public-health-bioinformatics
date Tue, 19 Sep 2023 18:03:41 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
3e0d5ceeeb0f planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/tbprofiler_json_to_tabular commit 24535690aedb81353cf5e036dc4577022d9604ad
public-health-bioinformatics
parents:
diff changeset
1 chrom genome_pos locus_tag feature_id gene type ref alt freq nucleotide_change protein_change change drugs
3e0d5ceeeb0f planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/tbprofiler_json_to_tabular commit 24535690aedb81353cf5e036dc4577022d9604ad
public-health-bioinformatics
parents:
diff changeset
2 Chromosome 761155 Rv0667 CCP43410 rpoB missense_variant C T 1.0 c.1349C>T p.Ser450Leu p.Ser450Leu rifampicin:resistance
3e0d5ceeeb0f planemo upload for repository https://github.com/public-health-bioinformatics/galaxy_tools/blob/master/tools/tbprofiler_json_to_tabular commit 24535690aedb81353cf5e036dc4577022d9604ad
public-health-bioinformatics
parents:
diff changeset
3 Chromosome 1674048 Rv1484 CCP44244 inhA upstream_gene_variant G A 1.0 c.-154G>A c.-154G>A isoniazid:resistance, ethionamide:resistance