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planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__feature_table commit 65e4952f33eb335528e8553150e9097e5ea8f556
author | q2d2 |
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date | Thu, 08 Jun 2023 19:45:31 +0000 |
parents | d32dc747e2dd |
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<?xml version='1.0' encoding='utf-8'?> <!-- Copyright (c) 2023, QIIME 2 development team. Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) --> <!-- This tool was automatically generated by: q2galaxy (version: 2023.5.0) for: qiime2 (version: 2023.5.1) --> <tool name="qiime2 feature-table subsample" id="qiime2__feature_table__subsample" version="2023.5.0+q2galaxy.2023.5.0.2" profile="22.05" license="BSD-3-Clause"> <description>Subsample table</description> <requirements> <container type="docker">quay.io/qiime2/core:2023.5</container> </requirements> <version_command>q2galaxy version feature_table</version_command> <command detect_errors="exit_code">q2galaxy run feature_table subsample '$inputs'</command> <configfiles> <inputs name="inputs" data_style="paths"/> </configfiles> <inputs> <param name="table" type="data" format="qza" label="table: FeatureTable[Frequency]" help="[required] The feature table to be sampled."> <options options_filter_attribute="metadata.semantic_type"> <filter type="add_value" value="FeatureTable[Frequency]"/> </options> <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureTable[Frequency]']</validator> </param> <param name="subsampling_depth" type="integer" min="1" value="" label="subsampling_depth: Int % Range(1, None)" help="[required] The total number of samples or features to be randomly sampled. Samples or features that are reduced to a zero sum will not be included in the resulting table."/> <param name="axis" type="select" label="axis: Str % Choices('sample', 'feature')" display="radio"> <option value="__q2galaxy__::literal::None">Selection required</option> <option value="sample">sample</option> <option value="feature">feature</option> <validator type="expression" message="Please verify this parameter.">value != '__q2galaxy__::literal::None'</validator> </param> </inputs> <outputs> <data name="sampled_table" format="qza" label="${tool.name} on ${on_string}: sampled_table.qza" from_work_dir="sampled_table.qza"/> </outputs> <tests/> <help> QIIME 2: feature-table subsample ================================ Subsample table Outputs: -------- :sampled_table.qza: The resulting subsampled feature table. | Description: ------------ Randomly pick samples or features, without replacement, from the table. | </help> <citations> <citation type="doi">10.1038/s41587-019-0209-9</citation> </citations> </tool>