Mercurial > repos > recetox > waveica
diff macros.xml @ 9:6fc9f6dbcef5 draft
planemo upload for repository https://github.com/RECETOX/galaxytools/tree/master/tools/waveica commit bbcbf9c32acaedffb78f0caef47faeed8f68cb52
author | recetox |
---|---|
date | Fri, 16 May 2025 10:14:27 +0000 |
parents | 1a2aeb8137bf |
children | 821062fc5782 |
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--- a/macros.xml Tue Aug 06 14:27:48 2024 +0000 +++ b/macros.xml Fri May 16 10:14:27 2025 +0000 @@ -22,29 +22,14 @@ <xml name="annotation"> <xrefs> - <xref type="bio.tools">waveica</xref> + <xref type="bio.tools">waveica</xref> </xrefs> </xml> <xml name="input_data"> - <param type="data" name="data" label="Feature table" format="csv,tsv,parquet" help=""/> - </xml> - <xml name="general_parameters"> - <param type="integer" value="20" name="k" label="Number of components to decompose" help="maximal component that ICA decomposes"/> - <param type="float" value="0" name="alpha" label="Alpha" help="trade-off value between the independence of samples (temporal ICA) and variables (spatial ICA), should be between 0 and 1"/> + <param type="data" name="data" label="Feature table" format="csv,tsv,tabular,parquet" help=""/> </xml> - <xml name="batchwise_parameters"> - <param type="float" value="0.05" name="t" label="Batch-association threshold" help="threshold to consider a component associate with the batch, - should be between 0 and 1"/> - <param type="float" value="0.05" name="t2" label="Group-association threshold" help="threshold to consider a component associate with the group, - should be between 0 and 1"/> - </xml> - <xml name="singlebatch_parameters"> - <param type="float" value="0" name="cutoff" label="Cutoff" help="threshold of the variation explained by the injection order for independent components, should be between 0 and 1"/> - </xml> - <xml name="exclude_blanks"> - <param name="exclude_blanks" type="boolean" checked="false" truevalue="TRUE" falsevalue="FALSE" label="Remove blanks" help="Excludes blank samples from the output" /> - </xml> + <xml name="wf"> <conditional name="wf"> <param type="select" name="wavelet_filter" label="Wavelet transform filter" help="wavelet function and filter length [1] (see footnotes for more details)">