Mercurial > repos > rnateam > blockbuster

comparison tool_dependencies.xml @ 2:0f3d3f9f120f draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/blockbuster commit 7a097197b6a5eda0ee430b36dd8e91bd3ce1db7b
author rnateam
date Fri, 15 Jan 2016 07:52:56 -0500
parents 6ae946589f04
children
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1:293c1420bcd7 2:0f3d3f9f120f
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <!-- blockbuster seems to have no version number, assuming a really small one --> 3 <!-- blockbuster seems to have no version number, assuming a really small one -->
4 <package name="blockbuster" version="0.0.1"> 4 <!-- the version 0.0.1.1 fixes the memory leak in blockbuster, but is not yet (15.01.2016) upstream-->
5 <package name="blockbuster" version="0.0.1.1">
5 <install version="1.0"> 6 <install version="1.0">
6 <actions> 7 <actions>
7 <action type="download_by_url">https://github.com/bgruening/download_store/raw/master/blockbuster/blockbuster-0.0.1.tar.gz</action> 8 <action type="download_by_url">https://github.com/bgruening/download_store/raw/master/blockbuster/blockbuster-0.0.1.1.tar.gz</action>
8 <action type="shell_command">make</action> 9 <action type="shell_command">make</action>
9 <action type="move_file"> 10 <action type="move_file">
10 <source>blockbuster.x</source> 11 <source>blockbuster.x</source>
11 <destination>$INSTALL_DIR/bin</destination> 12 <destination>$INSTALL_DIR/bin</destination>
12 </action> 13 </action>
15 </action> 16 </action>
16 </actions> 17 </actions>
17 </install> 18 </install>
18 <readme> 19 <readme>
19 Blockbuster detects blocks of overlapping reads using a gaussian-distribution approach. 20 Blockbuster detects blocks of overlapping reads using a gaussian-distribution approach.
20 GCC is needed to compilte Blockbuster. 21 GCC is needed to compile Blockbuster.
21 http://hoffmann.bioinf.uni-leipzig.de/LIFE/blockbuster.html 22 http://hoffmann.bioinf.uni-leipzig.de/LIFE/blockbuster.html
22 </readme> 23 </readme>
23 </package> 24 </package>
24 </tool_dependency> 25 </tool_dependency>