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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
author bgruening
date Mon, 19 Aug 2024 18:53:00 +0000
parents e66514da3a99
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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a80f279b4ad0 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents: 2
diff changeset
1 mLocARNA --- multiple Local (and global) Alignment of RNA --- LocARNA 2.0.1
0
e91e4f48875e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 287021573c592fdb70fdbbc88943aa16a8740fc0
rnateam
parents:
diff changeset
2
e91e4f48875e planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 287021573c592fdb70fdbbc88943aa16a8740fc0
rnateam
parents:
diff changeset
3
3
a80f279b4ad0 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents: 2
diff changeset
4 vhuU AG-CUCACAACCGAACCC-AU------------UUGGGAGGUUGUGAGCU-
a80f279b4ad0 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents: 2
diff changeset
5 fwdB AU-GUUGGAGGGGAACCC-GU------------AAGGGACCCUCCAAGAU-
a80f279b4ad0 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents: 2
diff changeset
6 selD UUACGAUGUGCCGAACCCUUU------------AAGGGAGGCACAUCGAAA
a80f279b4ad0 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents: 2
diff changeset
7 hdrA GG--CACCACUCGAAGGC--U------------AAGCCAAAGUGGUG-CU-
a80f279b4ad0 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents: 2
diff changeset
8 vhuD GU--UCUCUCGGGAACCCGUC------------AAGGGACCGAGAGA-AC-
a80f279b4ad0 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents: 2
diff changeset
9 fruA ---CCUCGAGGGGAACCC-GA------------AAGGGACCCGAGAGG---
a80f279b4ad0 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents: 2
diff changeset
10 fdhA CG-CCACCCUGCGAACCCAAUAUAAAAUAAUACAAGGGAGCAG-GUGGCG-
a80f279b4ad0 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents: 2
diff changeset
11
2
e66514da3a99 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 10ccc47885ce71e602d66e157bd475f1facbd042
bgruening
parents: 0
diff changeset
12 alifold ((.(((((((((...(((.................))).))))))))))). (-31.36 = -20.01 + -11.34)
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a80f279b4ad0 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents: 2
diff changeset
13 Results written to target directory /tmp/tmpstsz4a83/job_working_directory/000/2/working/mlocarna_results.