Mercurial > repos > rnateam > locarna_pairwise
comparison test-data/archaea-default.stdout @ 0:6a79a086fa50 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
| author | rnateam |
|---|---|
| date | Wed, 28 Dec 2016 18:53:24 -0500 |
| parents | |
| children | f3f08a777c10 |
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| -1:000000000000 | 0:6a79a086fa50 |
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| 1 mLocARNA --- multiple Local (and global) Alignment of RNA --- LocARNA 1.9.0 | |
| 2 Copyright Sebastian Will | |
| 3 | |
| 4 Compute pair probs ... | |
| 5 Compute pairwise alignments ... | |
| 6 Perform progressive alignment ... | |
| 7 | |
| 8 | |
| 9 | |
| 10 vhuU AG-CUCACAACCGAACCC-AU------------UUGGGAGGUUGUGAGCU- | |
| 11 fwdB AU-GUUGGAGGGGAACCC-GU------------AAGGGACCCUCCAAGAU- | |
| 12 selD UUACGAUGUGCCGAACCCUUU------------AAGGGAGGCACAUCGAAA | |
| 13 hdrA GG--CACCACUCGAAGGC--U------------AAGCCAAAGUGGUG-CU- | |
| 14 vhuD GU--UCUCUCGGGAACCCGUC------------AAGGGACCGAGAGA-AC- | |
| 15 fruA ---CCUCGAGGGGAACCC-GA------------AAGGGACCCGAGAGG--- | |
| 16 fdhA CG-CCACCCUGCGAACCCAAUAUAAAAUAAUACAAGGGAGCAG-GUGGCG- | |
| 17 | |
| 18 alifold ((.(((((((((...(((.................))).))))))))))). (-31.59 = -20.01 + -11.58) |