Mercurial > repos > rnateam > locarna_pairwise
view test-data/archaea-default.stdout @ 0:6a79a086fa50 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
| author | rnateam |
|---|---|
| date | Wed, 28 Dec 2016 18:53:24 -0500 |
| parents | |
| children | f3f08a777c10 |
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mLocARNA --- multiple Local (and global) Alignment of RNA --- LocARNA 1.9.0 Copyright Sebastian Will Compute pair probs ... Compute pairwise alignments ... Perform progressive alignment ... vhuU AG-CUCACAACCGAACCC-AU------------UUGGGAGGUUGUGAGCU- fwdB AU-GUUGGAGGGGAACCC-GU------------AAGGGACCCUCCAAGAU- selD UUACGAUGUGCCGAACCCUUU------------AAGGGAGGCACAUCGAAA hdrA GG--CACCACUCGAAGGC--U------------AAGCCAAAGUGGUG-CU- vhuD GU--UCUCUCGGGAACCCGUC------------AAGGGACCGAGAGA-AC- fruA ---CCUCGAGGGGAACCC-GA------------AAGGGACCCGAGAGG--- fdhA CG-CCACCCUGCGAACCCAAUAUAAAAUAAUACAAGGGAGCAG-GUGGCG- alifold ((.(((((((((...(((.................))).))))))))))). (-31.59 = -20.01 + -11.58)