Mercurial > repos > rnateam > locarna_pairwise_p
comparison test-data/archaea-default.stdout @ 0:c5f150d2686f draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 287021573c592fdb70fdbbc88943aa16a8740fc0
| author | rnateam |
|---|---|
| date | Fri, 13 Jan 2017 16:48:31 -0500 |
| parents | |
| children | 535f2e41d4f7 |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:c5f150d2686f |
|---|---|
| 1 mLocARNA --- multiple Local (and global) Alignment of RNA --- LocARNA 1.9.0 | |
| 2 Copyright Sebastian Will | |
| 3 | |
| 4 Compute pair probs ... | |
| 5 Compute pairwise alignments ... | |
| 6 Perform progressive alignment ... | |
| 7 | |
| 8 | |
| 9 | |
| 10 vhuU AG-CUCACAACCGAACCC-AU------------UUGGGAGGUUGUGAGCU- | |
| 11 fwdB AU-GUUGGAGGGGAACCC-GU------------AAGGGACCCUCCAAGAU- | |
| 12 selD UUACGAUGUGCCGAACCCUUU------------AAGGGAGGCACAUCGAAA | |
| 13 hdrA GG--CACCACUCGAAGGC--U------------AAGCCAAAGUGGUG-CU- | |
| 14 vhuD GU--UCUCUCGGGAACCCGUC------------AAGGGACCGAGAGA-AC- | |
| 15 fruA ---CCUCGAGGGGAACCC-GA------------AAGGGACCCGAGAGG--- | |
| 16 fdhA CG-CCACCCUGCGAACCCAAUAUAAAAUAAUACAAGGGAGCAG-GUGGCG- | |
| 17 | |
| 18 alifold ((.(((((((((...(((.................))).))))))))))). (-31.59 = -20.01 + -11.58) |