Mercurial > repos > rnateam > mafft

annotate test-data/mafft_kimura40.phylip.aln @ 15:bf28a8cff401 draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
author bgruening
date Wed, 20 Mar 2024 07:34:52 +0000
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bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
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1 3 948
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2 MZ681498.1 atgcatgtat aagtataacc tgccagacag ggaaactgcg gacggctcat
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3 MZ681497.1 ---------- ---------- ---------- -----ctgcg gacggctcat
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4 ON855043.1 ---------- ---------- -ggccgtca- -----ctccg gggggacaac
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6 tacaacagcc ttaatttact tgaccttgac aacctacttg gataactgcg
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7 tacaacagcc ttaatttact tgaccttgac aacctacttg gataactgcg
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8 acaaacgccc tgagggcttt actcgttggg gtgcaaactg ga--------
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10 gtaattctgg agctaataca tgcaccaaag ctccgatccc tcgtggagag
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11 gtaattctgg agctaataca tgcaccaaag ctccgatccc tcgtggagag
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12 ---------- ---------- ---------- ---------- ---tcgagtg
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bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
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14 gagcgcattt gttcgccaca aaaccaaacg ccccacaagg gcgttcagtg
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
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15 gagcgcattt gttcgccaca aaaccaaacg ccccacaagg gcgttcagtg
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16 gcgcacacat cccttccacg caa--agacc tgctgaagag gtcggaggcg
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18 ttgactcaga ataact---- ---------- -------aag ctgatcgcac
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19 ttgactcaga ataact---- ---------- -------aag ctgatcgcac
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20 atgagtccga gcaaccccac aagcaaccag gttggggaag ctg--cacac
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22 ggtctt---- ---------- ----gcaccg gcgacgtgtc tttcaagtgt
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23 ggtctt---- ---------- ----gcaccg gcgacgtgtc tttcaagtgt
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24 gatactggga tgcacgcccc cagggcacct aacggctgcc gctggcgtct
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26 ctgccttatc aactttcgat ggtagtgtat ctgcctacca tggttgtgac
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27 ctgccttatc aactttcgat ggtagtgtat ctgcctacca tggttgtgac
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28 gtgcgtcgtt ga---gcagt tgttgcgcac ttgctt---- ttgtcggagc
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30 gggtaacgga ggataagggt tcgactccgg agaaggggcc tgagaaatgg
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31 gggtaacgga ggataagggt tcgactccgg agaaggggcc tgagaaatgg
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32 tgtactcgga gcatgctggc atggacccac acaaaag--- ----------
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34 ccactacgtc taaggatggc agcaggcgcg caaattaccc actctcaaca
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35 ccactacgtc taaggatggc agcaggcgcg caaattaccc actctcaaca
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36 ---------- --tgtgtggc agcggccaca ca------cc cctgtccatg
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38 cgctgaggag gtagtgaaga gaaataacga gaccgttctc acatgaggcc
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
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39 cgctgaggag gtagtgaaga gaaataacga gaccgttctc acatgaggcc
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40 tcctacgga- ---------- -ccgtagcta gggcgtgct- ----------
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42 ggtcatcgga atgggtacaa cttaaaccct ttaacgagta tctatgagag
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43 ggtcatcgga atgggtacaa cttaaaccct ttaacgagta tctatgagag
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44 ---------- ---------- ---------- ---------- ----------
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46 ggcaagtctg gtgccagcag ccgcggtaat tccagctctc aaaatgcata
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47 ggcaagtctg gtgccagcag ccgcggtaat tccagctctc aaaatgcata
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48 ---------- ---------- -ctgggtttc ttcggctggc agtgttgcta
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50 gaattattgc tgcggttaaa aagctcgtag ttggatctgt gctggccgcc
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51 gaattattgc tgcggttaaa aagctcgtag ttggatctgt gctggccgcc
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52 cgtccgtggc tgtgatgaga cgacgcg--- ---------- ----------
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54 cggtctgctc gctgagcacg cactggtgcg gtcggctttc ctgcccggta
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55 cggtctgctc gctgagcacg cactggtgcg gtcggctttc ctgcccggta
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56 ---------- -----gtagg gccttgtgcg atgcgcct-- ----------
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58 cctccccggc gttggccttc accggtcggc gtcggtggcc gggcgagttt
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59 cctccccggc gttggccttc accggtcggc gtcggtggcc gggcgagttt
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60 --------gc acttggctta a--------- ------gact tgatgagctc
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62 actttgaaca aatcagag-- -----tgctt caaacaggcg tttcgcttga
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63 actttgaaca aatcagag-- -----tgctt caaacaggcg tttcgcttga
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64 actgcgaaga gccgccagca accttttttt catatacatt ttttacaggc
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66 atgttcgtgc atggaataat agaagaggat ttcggtccga ttttgttggt
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67 atgttcgtgc atggaataat agaagaggat ttcggtccga ttttgttggt
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68 acacttgtgt gctgatgaac aaaa------ ---------- ----------
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70 tttgctgacc gagataatgg ttaacagaga caaacggggc cattcgtatt
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71 tttgctgacc gagataatgg ttaacagaga caaacggggc cattcgtatt
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72 ---------- ---------- ---------- ---------- -------att
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74 gctacgtgag aggtg----- ---------- ---------- --------
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75 gctacgtgag aggtgaaatt cttggaccgt agcaagacgg actacagc
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76 ctagccttat cggtggatca ctcggctcgt aggtcgatg- --------
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