Mercurial > repos > rnateam > mafft

annotate test-data/mafft_kimura40.phylip.aln @ 15:bf28a8cff401 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
author bgruening
date Wed, 20 Mar 2024 07:34:52 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
15
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
1 3 948
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
2 MZ681498.1 atgcatgtat aagtataacc tgccagacag ggaaactgcg gacggctcat
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
3 MZ681497.1 ---------- ---------- ---------- -----ctgcg gacggctcat
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
4 ON855043.1 ---------- ---------- -ggccgtca- -----ctccg gggggacaac
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
5
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
6 tacaacagcc ttaatttact tgaccttgac aacctacttg gataactgcg
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
7 tacaacagcc ttaatttact tgaccttgac aacctacttg gataactgcg
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
8 acaaacgccc tgagggcttt actcgttggg gtgcaaactg ga--------
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
9
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
10 gtaattctgg agctaataca tgcaccaaag ctccgatccc tcgtggagag
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
11 gtaattctgg agctaataca tgcaccaaag ctccgatccc tcgtggagag
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
12 ---------- ---------- ---------- ---------- ---tcgagtg
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
13
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
14 gagcgcattt gttcgccaca aaaccaaacg ccccacaagg gcgttcagtg
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
15 gagcgcattt gttcgccaca aaaccaaacg ccccacaagg gcgttcagtg
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
16 gcgcacacat cccttccacg caa--agacc tgctgaagag gtcggaggcg
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
17
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
18 ttgactcaga ataact---- ---------- -------aag ctgatcgcac
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
19 ttgactcaga ataact---- ---------- -------aag ctgatcgcac
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
20 atgagtccga gcaaccccac aagcaaccag gttggggaag ctg--cacac
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
21
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
22 ggtctt---- ---------- ----gcaccg gcgacgtgtc tttcaagtgt
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
23 ggtctt---- ---------- ----gcaccg gcgacgtgtc tttcaagtgt
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
24 gatactggga tgcacgcccc cagggcacct aacggctgcc gctggcgtct
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
25
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
26 ctgccttatc aactttcgat ggtagtgtat ctgcctacca tggttgtgac
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
27 ctgccttatc aactttcgat ggtagtgtat ctgcctacca tggttgtgac
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
28 gtgcgtcgtt ga---gcagt tgttgcgcac ttgctt---- ttgtcggagc
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
29
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
30 gggtaacgga ggataagggt tcgactccgg agaaggggcc tgagaaatgg
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
31 gggtaacgga ggataagggt tcgactccgg agaaggggcc tgagaaatgg
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
32 tgtactcgga gcatgctggc atggacccac acaaaag--- ----------
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
33
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
34 ccactacgtc taaggatggc agcaggcgcg caaattaccc actctcaaca
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
35 ccactacgtc taaggatggc agcaggcgcg caaattaccc actctcaaca
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
36 ---------- --tgtgtggc agcggccaca ca------cc cctgtccatg
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
37
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
38 cgctgaggag gtagtgaaga gaaataacga gaccgttctc acatgaggcc
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
39 cgctgaggag gtagtgaaga gaaataacga gaccgttctc acatgaggcc
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
40 tcctacgga- ---------- -ccgtagcta gggcgtgct- ----------
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
41
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
42 ggtcatcgga atgggtacaa cttaaaccct ttaacgagta tctatgagag
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
43 ggtcatcgga atgggtacaa cttaaaccct ttaacgagta tctatgagag
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
44 ---------- ---------- ---------- ---------- ----------
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
45
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
46 ggcaagtctg gtgccagcag ccgcggtaat tccagctctc aaaatgcata
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
47 ggcaagtctg gtgccagcag ccgcggtaat tccagctctc aaaatgcata
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
48 ---------- ---------- -ctgggtttc ttcggctggc agtgttgcta
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
49
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
50 gaattattgc tgcggttaaa aagctcgtag ttggatctgt gctggccgcc
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
51 gaattattgc tgcggttaaa aagctcgtag ttggatctgt gctggccgcc
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
52 cgtccgtggc tgtgatgaga cgacgcg--- ---------- ----------
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
53
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
54 cggtctgctc gctgagcacg cactggtgcg gtcggctttc ctgcccggta
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
55 cggtctgctc gctgagcacg cactggtgcg gtcggctttc ctgcccggta
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
56 ---------- -----gtagg gccttgtgcg atgcgcct-- ----------
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
57
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
58 cctccccggc gttggccttc accggtcggc gtcggtggcc gggcgagttt
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
59 cctccccggc gttggccttc accggtcggc gtcggtggcc gggcgagttt
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
60 --------gc acttggctta a--------- ------gact tgatgagctc
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
61
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
62 actttgaaca aatcagag-- -----tgctt caaacaggcg tttcgcttga
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
63 actttgaaca aatcagag-- -----tgctt caaacaggcg tttcgcttga
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
64 actgcgaaga gccgccagca accttttttt catatacatt ttttacaggc
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
65
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
66 atgttcgtgc atggaataat agaagaggat ttcggtccga ttttgttggt
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
67 atgttcgtgc atggaataat agaagaggat ttcggtccga ttttgttggt
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
68 acacttgtgt gctgatgaac aaaa------ ---------- ----------
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
69
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
70 tttgctgacc gagataatgg ttaacagaga caaacggggc cattcgtatt
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
71 tttgctgacc gagataatgg ttaacagaga caaacggggc cattcgtatt
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
72 ---------- ---------- ---------- ---------- -------att
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
73
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
74 gctacgtgag aggtg----- ---------- ---------- --------
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
75 gctacgtgag aggtgaaatt cttggaccgt agcaagacgg actacagc
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
76 ctagccttat cggtggatca ctcggctcgt aggtcgatg- --------
bf28a8cff401 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
bgruening
parents:
diff changeset
77