Mercurial > repos > rnateam > mafft
diff test-data/mafft_fftns_result.aln @ 7:aaefa93c2dd2 draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit eff9db2cd18c82a7de37851571b8989b48014c71"
| author | rnateam |
|---|---|
| date | Wed, 15 Apr 2020 15:33:37 -0400 |
| parents | 15974dd17515 |
| children |
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--- a/test-data/mafft_fftns_result.aln Sat Nov 11 15:06:34 2017 -0500 +++ b/test-data/mafft_fftns_result.aln Wed Apr 15 15:33:37 2020 -0400 @@ -1,504 +1,468 @@ > 1== M63632 1 Lampetra japonica rhodopsin <>[BBRC174,1125-1132'91] ---------------------------------MNGTE--------------GDNF----- --------------YVP-----F-SNKTG----------LARSPYEYPQY-YLAEPWK--- ---------------YSALAAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMA -NLFMVLFG-FTVTMYTSMN-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIV -ICKPMGN-FRFGNTHAIMGVAFTWIMALAC-AAPPLVG-W-----SRYIPEGMQCSCGPD -YYTLNPNFNNESYVVYMFVVHFLVPFVIIFFCYGRLLCTV----KE-------------- -------------------------------------------------------AAAAQQ +----------------------------------------MNG----------------T +E--G--DNFYVP----FSNKTGLARSPYEYPQY-------YLAEPWK---------YSAL +AAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-FTVTMYTSM +N-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIVICKPMGN-FRFGNTHAIM +GVAFTWIMALAC-AAPPLVG-W-----SRYIPEGMQCSCGPDYYTLNPNFNNESYVVYMF +VVHFLVPFVIIFFCYGRLLCTV----KEAAAAQQ-------------------------- ------------------------------------------------------------ ---------------------ESASTQK------AEKEVTRMVVLMVIGFLVCWVPYASVA -FYIFT-HQGS--DFGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCMITTLCC------ ---GKNPLGDDE--SGASTSKTEVSSVS-TSPVS--------------------------- ------------------------------------PA----------------------- --- +------------------------------------------------------------ +-------------ESASTQK------AEKEVTRMVVLMVIGFLVCWVPYASVAFYIFT-H +QGS--DFGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCMITTLCC--------GKNPL +GDDE--SGASTSKTEVSSVS-TSPVSPA-------------------------------- +--------------------------------------------------------- > 2== U22180 1 rat opsin <rod>[J.Mol.Neurosci.5(3),207-209'94] ---------------------------------MNGTE--------------GPNF----- --------------YVP-----F-SNITG----------VVRSPFEQPQY-YLAEPWQ--- ---------------FSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA -DLFMVFGG-FTTTLYTSLH-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVV -VCKPMSN-FRFGENHAIMGVAFTWVMALAC-AAPPLVG-W-----SRYIPEGMQCSCGID -YYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTV----KE-------------- -------------------------------------------------------AAAQQQ +----------------------------------------MNG----------------T +E--G--PNFYVP----FSNITGVVRSPFEQPQY-------YLAEPWQ---------FSML +AAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSL +H-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSN-FRFGENHAIM +GVAFTWVMALAC-AAPPLVG-W-----SRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMF +VVHFTIPMIVIFFCYGQLVFTV----KEAAAQQQ-------------------------- ------------------------------------------------------------ ---------------------ESATTQK------AEKEVTRMVIIMVIFFLICWLPYASVA -MYIFT-HQGS--NFGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLCC------ ---GKNPLGDDE--ASATASKTE------TSQVA--------------------------- ------------------------------------PA----------------------- --- +------------------------------------------------------------ +-------------ESATTQK------AEKEVTRMVIIMVIFFLICWLPYASVAMYIFT-H +QGS--NFGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLCC--------GKNPL +GDDE--ASATASKTE------TSQVAPA-------------------------------- +--------------------------------------------------------- > 3== M92038 1 chicken green sensitive cone opsin <retina>[PNAS89,5932-5936'9 ---------------------------------MNGTE--------------GINF----- --------------YVP-----M-SNKTG----------VVRSPFEYPQY-YLAEPWK--- ---------------YRLVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVA -DLFMACFG-FTVTFYTAWN-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIV -VCKPMGN-FRFSATHAMMGIAFTWVMAFSC-AAPPLFG-W-----SRYMPEGMQCSCGPD -YYTHNPDYHNESYVLYMFVIHFIIPVVVIFFSYGRLICKV----RE-------------- -------------------------------------------------------AAAQQQ +----------------------------------------MNG----------------T +E--G--INFYVP----MSNKTGVVRSPFEYPQY-------YLAEPWK---------YRLV +CCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-FTVTFYTAW +N-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGN-FRFSATHAMM +GIAFTWVMAFSC-AAPPLFG-W-----SRYMPEGMQCSCGPDYYTHNPDYHNESYVLYMF +VIHFIIPVVVIFFSYGRLICKV----REAAAQQQ-------------------------- ------------------------------------------------------------ ---------------------ESATTQK------AEKEVTRMVILMVLGFMLAWTPYAVVA -FWIFT-NKGA--DFTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICC------ ---GKNPFGDEDVSSTVSQSKTEVSSVS-SSQVS--------------------------- ------------------------------------PA----------------------- --- +------------------------------------------------------------ +-------------ESATTQK------AEKEVTRMVILMVLGFMLAWTPYAVVAFWIFT-N +KGA--DFTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICC--------GKNPF +GDEDVSSTVSQSKTEVSSVS-SSQVSPA-------------------------------- +--------------------------------------------------------- > 4=p A45229 opsin, green-sensitive (clone GFgr-1) - goldfish ---------------------------------MNGTE--------------GKNF----- --------------YVP-----M-SNRTG----------LVRSPFEYPQY-YLAEPWQ--- ---------------FKILALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVA -GTIMVCFG-FTVTFYTAIN-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIV -VCKPMGS-FKFSSSHAFAGIAFTWVMALAC-AAPPLFG-W-----SRYIPEGMQCSCGPD -YYTLNPDYNNESYVIYMFVCHFILPVAVIFFTYGRLVCTV----KA-------------- -------------------------------------------------------AAAQQQ +----------------------------------------MNG----------------T +E--G--KNFYVP----MSNRTGLVRSPFEYPQY-------YLAEPWQ---------FKIL +ALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-FTVTFYTAI +N-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSSSHAFA +GIAFTWVMALAC-AAPPLFG-W-----SRYIPEGMQCSCGPDYYTLNPDYNNESYVIYMF +VCHFILPVAVIFFTYGRLVCTV----KAAAAQQQ-------------------------- ------------------------------------------------------------ ---------------------DSASTQK------AEREVTKMVILMVFGFLIAWTPYATVA -AWIFF-NKGA--DFSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIFC------ ---GKNPLGDDE-SSTVSTSKTEVSS------VS--------------------------- ------------------------------------PA----------------------- --- +------------------------------------------------------------ +-------------DSASTQK------AEREVTKMVILMVFGFLIAWTPYATVAAWIFF-N +KGA--DFSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIFC--------GKNPL +GDDE-SSTVSTSKTEVSS------VSPA-------------------------------- +--------------------------------------------------------- > 5=p B45229 opsin, green-sensitive (clone GFgr-2) - goldfish ---------------------------------MNGTE--------------GNNF----- --------------YVP-----L-SNRTG----------LVRSPFEYPQY-YLAEPWQ--- ---------------FKLLAVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVA -GAIMVCFG-FTVTFYTAIN-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIV -VCKPMGS-FKFSSTHASAGIAFTWVMAMAC-AAPPLVG-W-----SRYIPEGIQCSCGPD -YYTLNPEYNNESYVLYMFICHFILPVTIIFFTYGRLVCTV----KA-------------- -------------------------------------------------------AAAQQQ +----------------------------------------MNG----------------T +E--G--NNFYVP----LSNRTGLVRSPFEYPQY-------YLAEPWQ---------FKLL +AVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-FTVTFYTAI +N-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSSTHASA +GIAFTWVMAMAC-AAPPLVG-W-----SRYIPEGIQCSCGPDYYTLNPEYNNESYVLYMF +ICHFILPVTIIFFTYGRLVCTV----KAAAAQQQ-------------------------- ------------------------------------------------------------ ---------------------DSASTQK------AEREVTKMVILMVLGFLVAWTPYATVA -AWIFF-NKGA--AFSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLFC------ ---GKNPLGDEE-SSTVSTSKTEVSS------VS--------------------------- ------------------------------------PA----------------------- --- +------------------------------------------------------------ +-------------DSASTQK------AEREVTKMVILMVLGFLVAWTPYATVAAWIFF-N +KGA--AFSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLFC--------GKNPL +GDEE-SSTVSTSKTEVSS------VSPA-------------------------------- +--------------------------------------------------------- > 6== L11864 1 Carassius auratus blue cone opsin <retina>[Biochemistry32,208- ---------------------------------MKQVPEF------------HEDF----- --------------YIPIP-LDI-NNLS------------AYSPFLVPQD-HLGNQGI--- ---------------FMAMSVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIA -NLFVAIFG-SPLSFYSFFN-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLV -ICKPLGN-FTFKTPHAIAGCILPWISALAA-SLPPLFG-W-----SRYIPEGLQCSCGPD -WYTTNNKYNNESYVMFLFCFCFAVPFGTIVFCYGQLLITL----KL-------------- -------------------------------------------------------AAKAQA +----------------------------------------MKQ----------------V +PEFH--EDFYIPIPLDINNLS--AYSPFLVPQD-------HLGNQGI---------FMAM +SVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-SPLSFYSFF +N-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGN-FTFKTPHAIA +GCILPWISALAA-SLPPLFG-W-----SRYIPEGLQCSCGPDWYTTNNKYNNESYVMFLF +CFCFAVPFGTIVFCYGQLLITL----KLAAKAQA-------------------------- ------------------------------------------------------------ ---------------------DSASTQK------AEREVTKMVVVMVLGFLVCWAPYASFS -LWIVS-HRGE--EFDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCMM-KMVC------ ---GKN-IEEDE--ASTSSQVTQVSS------VA--------------------------- ------------------------------------PEK---------------------- --- +------------------------------------------------------------ +-------------DSASTQK------AEREVTKMVVVMVLGFLVCWAPYASFSLWIVS-H +RGE--EFDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCMM-KMVC--------GKN-I +EEDE--ASTSSQVTQVSS------VAPEK------------------------------- +--------------------------------------------------------- > 7== M13299 1 human BCP <>[Science232(4747),193-202'86] ---------------------------------MRKMS--------------EEEF----- --------------YL------F-KNIS------------SVGPWDGPQY-HIAPVWA--- ---------------FYLQAAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFG -GFLLCIFS-VFPVFVASCN-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIV -ICKPFGN-FRFSSKHALTVVLATWTIGIGV-SIPPFFG-W-----SRFIPEGLQCSCGPD -WYTVGTKYRSESYTWFLFIFCFIVPLSLICFSYTQLLRAL----KA-------------- -------------------------------------------------------VAAQQQ +----------------------------------------MRK----------------M +S--E--EEFYL-----FKNIS--SVGPWDGPQY-------HIAPVWA---------FYLQ +AAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFS-VFPVFVASC +N-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGN-FRFSSKHALT +VVLATWTIGIGV-SIPPFFG-W-----SRFIPEGLQCSCGPDWYTVGTKYRSESYTWFLF +IFCFIVPLSLICFSYTQLLRAL----KAVAAQQQ-------------------------- ------------------------------------------------------------ ---------------------ESATTQK------AEREVSRMVVVMVGSFCVCYVPYAAFA -MYMVN-NRNH--GLDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACIM-KMVC------ ---GKA-MTDES--DTCSSQKTEVSTVS-STQVG--------------------------- ------------------------------------PN----------------------- --- +------------------------------------------------------------ +-------------ESATTQK------AEREVSRMVVVMVGSFCVCYVPYAAFAMYMVN-N +RNH--GLDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACIM-KMVC--------GKA-M +TDES--DTCSSQKTEVSTVS-STQVGPN-------------------------------- +--------------------------------------------------------- > 8=opsin, greensensitive human (fragment) S07060 ------------------------------------------------------------ ------------------------------------------------------------ +------------------------------------------DLAETVIA-STISIVNQV +S-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLAIV +GIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLM +VTCCITPLSIIVLCYLQVWLAI----RAVAKQQK-------------------------- ------------------------------------------------------------ -DLAETVIA-STISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLV -VCKPFGN-VRFDAKLAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPD -VFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAI----RA-------------- -------------------------------------------------------VAKQQK +------------------------------------------------------------ +-------------ESESTQK------AEKEVTRMVVVMVLAFC----------------- +------------------------------------------------------------ +------------------------------------------------------------ +--------------------------------------------------------- +> 9== K03494 1 human GCP <>[Science232(4747),193-202'86] +----------------------------------------MAQQWSLQRLAGRHPQDSYE +DSTQ--SSIFT-----YTNSNS-TRGPFEGPNY-------HIAPRWV---------YHLT +SVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISVVNQV +Y-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGN-VRFDAKLAIV +GIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLM +VTCCITPLSIIVLCYLQVWLAI----RAVAKQQK-------------------------- +------------------------------------------------------------ +------------------------------------------------------------ +-------------ESESTQK------AEKEVTRMVVVMVLAFCFCWGPYAFFACFAAA-N +PGY--PFHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCIL-QLF---------GKK-V +DDGS--ELSSASKTEVSSV---SSVSPA-------------------------------- +--------------------------------------------------------- +> 10== Z68193 1 human Red Opsin <>[] +----------------------------------------MAQQWSLQRLAGRHPQDSYE +DSTQ--SSIFT-----YTNSNS-TRGPFEGPNY-------HIAPRWV---------YHLT +SVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISIVNQV +S-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLAIV +GIAFSWIWSAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLM +VTCCIIPLAIIMLCYLQVWLAI----RAVAKQQK-------------------------- +------------------------------------------------------------ ------------------------------------------------------------ ---------------------ESESTQK------AEKEVTRMVVVMVLAFC---------- +-------------ESESTQK------AEKEVTRMVVVMIFAYCVCWGPYTFFACFAAA-N +PGY--AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCIL-QLF---------GKK-V +DDGS--ELSSASKTEVSSV---SSVSPA-------------------------------- +--------------------------------------------------------- +> 11== M92036 1 Gecko gecko P521 <retina>[PNAS89,6841-6845'92] +----------------------------------------MTEAWNVAVFAARRSRDD-D +DTTR--GSVFT-----YTNTNN-TRGPFEGPNY-------HIAPRWV---------YNLV +SFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-STISVFNQI +F-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGN-IKFDSKLAII +GIVFSWVWAWGW-SAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSVELGCQSFMLTLM +ITCCFLPLFIIIVCYLQVWMAI----RAVAAQQK-------------------------- +------------------------------------------------------------ ------------------------------------------------------------ +-------------ESESTQK------AEREVSRMVVVMIVAFCICWGPYASFVSFAAA-N +PGY--AFHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCIM-QLF---------GKK-V +DDGS--EASTTSRTEVSSVS-NSSVAPA-------------------------------- +--------------------------------------------------------- +> 12== M62903 1 chicken visual pigment <>[BBRC173,1212-1217'90] +----------------------------------------MAA-WEAAFAARRRHEE--E +DTTR--DSVFT-----YTNSNN-TRGPFEGPNY-------HIAPRWV---------YNLT +SVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-STISVINQI +S-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGN-IKFDGKLAVA +GILFSWLWSCAW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSDPGVQSYMVVLM +VTCCFFPLAIIILCYLQVWLAI----RAVAAQQK-------------------------- +------------------------------------------------------------ +------------------------------------------------------------ +-------------ESESTQK------AEKEVSRMVVVMIVAYCFCWGPYTFFACFAAA-N +PGY--AFHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCIL-QLF---------GKK-V +DDGS--EVST-SRTEVSSVS-NSSVSPA-------------------------------- +--------------------------------------------------------- +> 13== S75720 1 chicken P-opsin <>[Science267(5203),1502-1506'95] +----------------------------------------MS-----------------S +NSSQ--AP-----------PNG-TPGPFDGPQW------PYQAPQST---------YVGV +AVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-SSVSLSNNI +N-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGD-FQFQRRHAVS +GCAFTWGWALLW-SAPPLLG-W-----SSYVPEGLRTSCGPNWYTGGSNN--NSYILSLF +VTCFVLPLSLILFSYTNLLLTL----RAAAAQQK-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ --- -> 9== K03494 1 human GCP <>[Science232(4747),193-202'86] ---------------------------------MAQQWSLQRLAGRHPQDSYEDST----- --------------QSSI--FTY-TNSNS-----------TRGPFEGPNY-HIAPRWV--- ---------------YHLTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVA -DLAETVIA-STISVVNQVY-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMV -VCKPFGN-VRFDAKLAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPD -VFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAI----RA-------------- -------------------------------------------------------VAKQQK ------------------------------------------------------------- ---------------------ESESTQK------AEKEVTRMVVVMVLAFCFCWGPYAFFA -CFAAA-NPGY--PFHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCIL-QLF------- ---GKK-VDDGS--ELSSASKTEVSSV---SSVS--------------------------- ------------------------------------PA----------------------- --- -> 10== Z68193 1 human Red Opsin <>[] ---------------------------------MAQQWSLQRLAGRHPQDSYEDST----- --------------QSSI--FTY-TNSNS-----------TRGPFEGPNY-HIAPRWV--- ---------------YHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVA -DLAETVIA-STISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLV -VCKPFGN-VRFDAKLAIVGIAFSWIWSAVW-TAPPIFG-W-----SRYWPHGLKTSCGPD -VFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAI----RA-------------- -------------------------------------------------------VAKQQK ------------------------------------------------------------- ---------------------ESESTQK------AEKEVTRMVVVMIFAYCVCWGPYTFFA -CFAAA-NPGY--AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCIL-QLF------- ---GKK-VDDGS--ELSSASKTEVSSV---SSVS--------------------------- ------------------------------------PA----------------------- --- -> 11== M92036 1 Gecko gecko P521 <retina>[PNAS89,6841-6845'92] ---------------------------------MTEAWNVAVFAARRSRDD-DDTT----- --------------RGSV--FTY-TNTNN-----------TRGPFEGPNY-HIAPRWV--- ---------------YNLVSFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFV -DLVETLVA-STISVFNQIF-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFV -VCKPFGN-IKFDSKLAIIGIVFSWVWAWGW-SAPPIFG-W-----SRYWPHGLKTSCGPD -VFSGSVELGCQSFMLTLMITCCFLPLFIIIVCYLQVWMAI----RA-------------- -------------------------------------------------------VAAQQK ------------------------------------------------------------- ---------------------ESESTQK------AEREVSRMVVVMIVAFCICWGPYASFV -SFAAA-NPGY--AFHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCIM-QLF------- ---GKK-VDDGS--EASTTSRTEVSSVS-NSSVA--------------------------- ------------------------------------PA----------------------- --- -> 12== M62903 1 chicken visual pigment <>[BBRC173,1212-1217'90] ---------------------------------MAA-WEAAFAARRRHEE--EDTT----- --------------RDSV--FTY-TNSNN-----------TRGPFEGPNY-HIAPRWV--- ---------------YNLTSVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVA -DLGETVIA-STISVINQIS-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFV -VCKPFGN-IKFDGKLAVAGILFSWLWSCAW-TAPPIFG-W-----SRYWPHGLKTSCGPD -VFSGSSDPGVQSYMVVLMVTCCFFPLAIIILCYLQVWLAI----RA-------------- -------------------------------------------------------VAAQQK ------------------------------------------------------------- ---------------------ESESTQK------AEKEVSRMVVVMIVAYCFCWGPYTFFA -CFAAA-NPGY--AFHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCIL-QLF------- ---GKK-VDDGS--EVST-SRTEVSSVS-NSSVS--------------------------- ------------------------------------PA----------------------- --- -> 13== S75720 1 chicken P-opsin <>[Science267(5203),1502-1506'95] ---------------------------------MS-----------------SNSS----- --------------QAP---------PNG-----------TPGPFDGPQWPYQAPQST--- ---------------YVGVAVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVA -DLLVTLCG-SSVSLSNNIN-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVV -VCKPLGD-FQFQRRHAVSGCAFTWGWALLW-SAPPLLG-W-----SSYVPEGLRTSCGPN -WYTGGSNN--NSYILSLFVTCFVLPLSLILFSYTNLLLTL----RA-------------- -------------------------------------------------------AAAQQK ------------------------------------------------------------- ---------------------EADTTQR------AEREVTRMVIVMVMAFLLCWLPYSTFA -LVVAT-HKGI--IIQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCLL-EMLCCGY--- --QPQR-TGKAS--PGTPGPHADVTAAGLRNKVM--------------------------- ------------------------------------PAHPV-------------------- --- +-------------EADTTQR------AEREVTRMVIVMVMAFLLCWLPYSTFALVVAT-H +KGI--IIQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCLL-EMLCCGY----QPQR-T +GKAS--PGTPGPHADVTAAGLRNKVMPAHPV----------------------------- +--------------------------------------------------------- > 14== M17718 1 D.melanogaster Rh3 <>[J.Neurosci.7,1550-1557'87] -----------MES--GNV-----------SSSLFGNVSTAL----------RPEA----- --------------RLSA------ETRLL----------GWNVPPEELR--HIPEHWLTYP -E--------PPESMNYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFC -DFMMMVK--TPIFIYNSFH-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNV -ITRPMEG--KMTHGKAIAMIIFIYMYATPW-VVACYTETW-----GRFVPEGYLTSCTFD -YLT--DNFDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKA-------------- -------------------------------------------------------LRDQAK -KMN---------------VESLRS------------------------------------ --------------------NVDKNKET------AEIRIAKAAITICFLFFCSWTPYGVMS -LIGAF-GDKT--LLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCPWLAL--- ----NE-KAPES----SAVASTSTTQEPQQTTAA--------------------------- ------------------------------------------------------------- --- +----------MESGNVSS------------SLFGNVST-ALRP----------------E +ARLS--A----------ETRLLGWNVPPEELR--------HIPEHWLTYPEPPESMNYLL +GTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK--TPIFIYNSF +H-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG--KMTHGKAIA +MIIFIYMYATPW-VVACYTETW-----GRFVPEGYLTSCTFDYLT--DNFDTRLFVACIF +FFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKK------------------------- +--------------------------------------------------MN-------- +--VESL------------------------------------------------------ +----------RSNVDKNKET------AEIRIAKAAITICFLFFCSWTPYGVMSLIGAF-G +DKT--LLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCPWLAL---------N +EKAP--ESSAVASTSTTQEP--QQTTAA-------------------------------- +--------------------------------------------------------- > 15== X65879 1 Drosophila pseudoobscura Dpse\Rh3 <>[Genetics132(1),193-204'92 -----------MEY--HNV-----------SSVL-GNVSSVL----------RPDA----- --------------RLSA------ESRLL----------GWNVPPDELR--HIPEHWLIYP -E--------PPESMNYLLGTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFC -DFMMMIK--TPIFIYNSFH-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNV -ITRPMEG--KMTHGKAIAMIIFIYLYATPW-VVACYTESW-----GRFVPEGYLTSCTFD -YLT--DNFDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKA-------------- -------------------------------------------------------LRDQAK -KMN---------------VDSLRS------------------------------------ --------------------NVDKSKEA------AEIRIAKAAITICFLFFASWTPYGVMS -LIGAF-GDKT--LLTPGATMIPACTCKMVACIDPFVYAISHPRYRMELQKRCPWLAI--- ----SE-KAPES----RAAISTSTTQEQQQTTAA--------------------------- ------------------------------------------------------------- --- +----------MEYHNVSS------------VL-GNVSS-VLRP----------------D +ARLS--A----------ESRLLGWNVPPDELR--------HIPEHWLIYPEPPESMNYLL +GTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK--TPIFIYNSF +H-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG--KMTHGKAIA +MIIFIYLYATPW-VVACYTESW-----GRFVPEGYLTSCTFDYLT--DNFDTRLFVACIF +FFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKK------------------------- +--------------------------------------------------MN-------- +--VDSL------------------------------------------------------ +----------RSNVDKSKEA------AEIRIAKAAITICFLFFASWTPYGVMSLIGAF-G +DKT--LLTPGATMIPACTCKMVACIDPFVYAISHPRYRMELQKRCPWLAI---------S +EKAP--ESRAAISTSTTQEQ--QQTTAA-------------------------------- +--------------------------------------------------------- > 16== M17730 1 D.melanogaster Rh4 opsin <>[J.Neurosci.7,1558-1566'87] -----------ME-------------------PLCNASEPPL----------RPEA----- --------------R-SSG---NGDLQFL----------GWNVPPDQIQ--YIPEHWLTQL -E--------PPASMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVF -DLIMCLK--APIF--NSFH-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNV -ITKPMNR--NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFD -YLS--DNFDTRLFVGTIFFFSFVCPTLMILYYYSQIVGHVFSHEKA-------------- -------------------------------------------------------LREQAK -KMN---------------VESLRS------------------------------------ --------------------NVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMS -LIGAF-GDKS--LLTQGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCPWLGV--- ----NE-KSGEI----SSAQSTTTQEQ-QQTTAA--------------------------- ------------------------------------------------------------- --- +----------ME------------------PL-CNASEPPLRP----------------E +AR-S--SG---N----GDLQFLGWNVPPDQIQ--------YIPEHWLTQLEPPASMHYML +GVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIF--NSF +H-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVI +MNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLFVGTIF +FFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKK------------------------- +--------------------------------------------------MN-------- +--VESL------------------------------------------------------ +----------RSNVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMSLIGAF-G +DKS--LLTQGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCPWLGV---------N +EKSG--EISSAQST-TTQEQ--QQTTAA-------------------------------- +--------------------------------------------------------- > 17== X65880 1 Drosophila pseudoobscura Dpse\Rh4 <>[Genetics132(1),193-204'92 -----------MD-------------------ALCNASEPPL----------RPEA----- --------------RMSSG---SDELQFL----------GWNVPPDQIQ--YIPEHWLTQL -E--------PPASMHYMLGVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVF -DLIMCLK--APIFIYNSFH-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNV -ITKPMNR--NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFD -YLS--DNFDTRLFVGTIFLFSFVVPTLMILYYYSQIVGHVFNHEKA-------------- -------------------------------------------------------LREQAK -KMN---------------VESLRS------------------------------------ --------------------NVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMS -LIGAF-GDKS--LLTPGATMIPACTCKLVACIEPFVYAISHPRYRMELQKRCPWLGV--- ----NE-KSGEA----SSAQSTTTQEQTQQTSAA--------------------------- ------------------------------------------------------------- --- +----------MD------------------AL-CNASEPPLRP----------------E +ARMS--SG---S----DELQFLGWNVPPDQIQ--------YIPEHWLTQLEPPASMHYML +GVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIFIYNSF +H-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVI +MNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLFVGTIF +LFSFVVPTLMILYYYSQIVGHVFNHEKALREQAKK------------------------- +--------------------------------------------------MN-------- +--VESL------------------------------------------------------ +----------RSNVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMSLIGAF-G +DKS--LLTPGATMIPACTCKLVACIEPFVYAISHPRYRMELQKRCPWLGV---------N +EKSG--EASSAQST-TTQEQ-TQQTSAA-------------------------------- +--------------------------------------------------------- > 18== D50584 1 Hemigrapsus sanguineus opsin BcRh2 <compound eye>[J.Exp.Biol.1 ---------------------------------MTNATGPQM----------AYYG----- --------------AASMD-FGYPEGVSI----------VDFVRPEIKP--YVHQHWYNYP -P--------VNPMWHYLLGVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALS -DLIMLTTN-VPFFTYNCFSGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNI -ICNGFNG-PKLTTGKAVVFALISWVIAIGC-ALPPFFG-W-----GNYILEGILDSCSYD -YLT--QDFNTFSYNIFIFVFDYFLPAAIIVFSYVFIVKAIFAHEAA-------------- -------------------------------------------------------MRAQAK -KMN---------------VSTLRS------------------------------------ ---------------------NEADAQR------AEIRIAKTALVNVSLWFICWTPYALIS -LKGVM-GDTS--GITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAITQHLPWFCV--- ----HE-TETKS-NDDSQSNSTVAQDKA--------------------------------- ------------------------------------------------------------- --- +--------------------------------MTNATGPQMAY----------------Y +GAAS--MD-FGY----PEGVSIVDFVRPEIKP--------YVHQHWYNYPPVNPMWHYLL +GVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTN-VPFFTYNCF +SGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNIICNGFNG-PKLTTGKAVV +FALISWVIAIGC-ALPPFFG-W-----GNYILEGILDSCSYDYLT--QDFNTFSYNIFIF +VFDYFLPAAIIVFSYVFIVKAIFAHEAAMRAQAKK------------------------- +--------------------------------------------------MN-------- +--VSTL------------------------------------------------------ +----------RS-NEADAQR------AEIRIAKTALVNVSLWFICWTPYALISLKGVM-G +DTS--GITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAITQHLPWFCV------HE-T +ETKS--NDDSQSNSTVAQDK-A-------------------------------------- +--------------------------------------------------------- > 19== D50583 1 Hemigrapsus sanguineus opsin BcRh1 <compound eye>[J.Exp.Biol.1 ---------------------------------MANVTGPQM----------AFYG----- --------------SGAAT-FGYPEGMTV----------ADFVPDRVKH--MVLDHWYNYP -P--------VNPMWHYLLGVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALS -DLIMLTTN-FPPFCYNCFSGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNI -ICNGFNG-PKLTQGKATFMCGLAWVISVGW-SLPPFFG-W-----GSYTLEGILDSCSYD -YFT--RDMNTITYNICIFIFDFFLPASVIVFSYVFIVKAIFAHEAA-------------- -------------------------------------------------------MRAQAK -KMN---------------VTNLRS------------------------------------ ---------------------NEAETQR------AEIRIAKTALVNVSLWFICWTPYAAIT -IQGLL-GNAE--GITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAITQHLPWFCV--- ----HE-KDPND-VEENQSSNTQTQEKS--------------------------------- ------------------------------------------------------------- --- +--------------------------------MANVTGPQMAF----------------Y +GSGA--AT-FGY----PEGMTVADFVPDRVKH--------MVLDHWYNYPPVNPMWHYLL +GVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTN-FPPFCYNCF +SGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNIICNGFNG-PKLTQGKATF +MCGLAWVISVGW-SLPPFFG-W-----GSYTLEGILDSCSYDYFT--RDMNTITYNICIF +IFDFFLPASVIVFSYVFIVKAIFAHEAAMRAQAKK------------------------- +--------------------------------------------------MN-------- +--VTNL------------------------------------------------------ +----------RS-NEAETQR------AEIRIAKTALVNVSLWFICWTPYAAITIQGLL-G +NAE--GITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAITQHLPWFCV------HE-K +DPND--VEENQSSNTQTQEK-S-------------------------------------- +--------------------------------------------------------- > 20== K02320 1 D.melanogaster opsin <>[Cell40,851-858'85] ----------------MES-----------FAVAAAQLGPHF----------APLS----- -------------------------NGSV----------VDKVTPDMAH--LISPYWNQFP -A--------MDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAIS -DFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQV -IVKGMAG-RPMTIPLALGKM---------------------------YVPEGNLTSCGID -YLE--RDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA-------------- -------------------------------------------------------MREQAK -KMN---------------VKSLRS------------------------------------ ---------------------SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVIN -CMGLF-KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF--- ----GK-VDDGK-SSDAQSQATASEAESKA------------------------------- ------------------------------------------------------------- --- +----------ME----SF------------AVAAAQLGPHFAP----------------L +S-----------------NGSVVDKVTPDMAH--------LISPYWNQFPAMDPIWAKIL +TAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLY +F-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG +KM---------------------------YVPEGNLTSCGIDYLE--RDWNPRSYLIFYS +IFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKK------------------------- +--------------------------------------------------MN-------- +--VKSL------------------------------------------------------ +----------RS-SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVINCMGLF-K +F-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-V +DDGK--SSDAQSQA-TASEA-ESKA----------------------------------- +--------------------------------------------------------- > 21== K02315 1 D.melanogaster ninaE <>[Cell40,839-850'85] ----------------MES-----------FAVAAAQLGPHF----------APLS----- -------------------------NGSV----------VDKVTPDMAH--LISPYWNQFP -A--------MDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAIS -DFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQV -IVKGMAG-RPMTIPLALGKIAYIWFMSSIW-CLAPAFG-W-----SRYVPEGNLTSCGID -YLE--RDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA-------------- -------------------------------------------------------MREQAK -KMN---------------VKSLRS------------------------------------ ---------------------SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVIN -CMGLF-KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF--- ----GK-VDDGK-SSDAQSQATASEAESKA------------------------------- ------------------------------------------------------------- --- +----------ME----SF------------AVAAAQLGPHFAP----------------L +S-----------------NGSVVDKVTPDMAH--------LISPYWNQFPAMDPIWAKIL +TAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLY +F-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG +KIAYIWFMSSIW-CLAPAFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSYLIFYS +IFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKK------------------------- +--------------------------------------------------MN-------- +--VKSL------------------------------------------------------ +----------RS-SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVINCMGLF-K +F-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-V +DDGK--SSDAQSQA-TASEA-ESKA----------------------------------- +--------------------------------------------------------- > 22== X65877 1 Drosophila pseudoobscura Dpse\ninaE <>[Genetics132(1),193-204' ----------------MDS-----------FAAVATQLGPQF----------AAPS----- -------------------------NGSV----------VDKVTPDMAH--LISPYWDQFP -A--------MDPIWAKILTAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAIS -DFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQV -IVKGMAG-RPMTIPLALGKIAYIWFMSTIWCCLAPVFG-W-----SRYVPEGNLTSCGID -YLE--RDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA-------------- -------------------------------------------------------MREQAK -KMN---------------VKSLRS------------------------------------ ---------------------SEDADKS------AEGKLAKVALVTISLWFMAWTPYLVIN -CMGLF-KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF--- ----GK-VDDGK-SSEAQSQATTSEAESKA------------------------------- ------------------------------------------------------------- --- +----------MD----SF------------AAVATQLGPQFAA----------------P +S-----------------NGSVVDKVTPDMAH--------LISPYWDQFPAMDPIWAKIL +TAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLY +F-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG +KIAYIWFMSTIWCCLAPVFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSYLIFYS +IFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKK------------------------- +--------------------------------------------------MN-------- +--VKSL------------------------------------------------------ +----------RS-SEDADKS------AEGKLAKVALVTISLWFMAWTPYLVINCMGLF-K +F-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-V +DDGK--SSEAQSQA-TTSEA-ESKA----------------------------------- +--------------------------------------------------------- > 23== M12896 1 D.melanogaster Rh2 <>[Cell44,705-710'86] -----------MERSHLPE-----------TPFDLAHSGPRF----------QAQS----- --------------SG---------NGSV----------LDNVLPDMAH--LVNPYWSRFA -P--------MDPMMSKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFS -DFCMMASQ-SPVMIINFYY-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNV -IVKGING-TPMTIKTSIMKILFIWMMAVFW-TVMPLIG-W-----SAYVPEGNLTACSID -YMT--RMWNPRSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKA-------------- -------------------------------------------------------MREQAK -KMN---------------VKSLRS------------------------------------ ---------------------SEDCDKS------AEGKLAKVALTTISLWFMAWTPYLVIC -YFGLF-KI-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCPMCVF--- ----GN-TDEPKPDAPASDTETTSEADSKA------------------------------- ------------------------------------------------------------- --- +-----MERSHLP----ET------------PFDLAHSGPRFQA----------------Q +SSG---------------NGSVLDNVLPDMAH--------LVNPYWSRFAPMDPMMSKIL +GLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFY +Y-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIM +KILFIWMMAVFW-TVMPLIG-W-----SAYVPEGNLTACSIDYMT--RMWNPRSYLITYS +LFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKK------------------------- +--------------------------------------------------MN-------- +--VKSL------------------------------------------------------ +----------RS-SEDCDKS------AEGKLAKVALTTISLWFMAWTPYLVICYFGLF-K +I-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCPMCVF------GN-T +DEPK--PDAPASDTETTSEA-DSKA----------------------------------- +--------------------------------------------------------- > 24== X65878 1 Drosophila pseudoobscura Dpse\Rh2 <>[Genetics132(1),193-204'92 -----------MERSLLPE-----------PPLAMALLGPRF----------EAQT----- --------------GG---------NRSV----------LDNVLPDMAP--LVNPHWSRFA -P--------MDPTMSKILGLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFS -DFCMMASQ-SPVMIINFYY-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNV -IVKGING-TPMTIKTSIMKIAFIWMMAVFW-TIMPLIG-W-----SSYVPEGNLTACSID -YMT--RQWNPRSYLITYSLFVYYTPLFMICYSYWFIIATVAAHEKA-------------- -------------------------------------------------------MRDQAK -KMN---------------VKSLRS------------------------------------ ---------------------SEDCDKS------AENKLAKVALTTISLWFMAWTPYLIIC -YFGLF-KI-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVLKEKCPMCVC--- ----GT-TDEPKPDAPPSDTETTSEAESKD------------------------------- ------------------------------------------------------------- --- +-----MERSLLP----EP------------PLAMALLGPRFEA----------------Q +TGG---------------NRSVLDNVLPDMAP--------LVNPHWSRFAPMDPTMSKIL +GLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFY +Y-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIM +KIAFIWMMAVFW-TIMPLIG-W-----SSYVPEGNLTACSIDYMT--RQWNPRSYLITYS +LFVYYTPLFMICYSYWFIIATVAAHEKAMRDQAKK------------------------- +--------------------------------------------------MN-------- +--VKSL------------------------------------------------------ +----------RS-SEDCDKS------AENKLAKVALTTISLWFMAWTPYLIICYFGLF-K +I-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVLKEKCPMCVC------GT-T +DEPK--PDAPPSDTETTSEA-ESKD----------------------------------- +--------------------------------------------------------- > 25== U26026 1 Apis mellifera long-wavelength rhodopsin <>[] ---------------------------------MIAVSGPSY----------EAFS----- --------------YGGQARF---NNQTV----------VDKVPPDMLH--LIDANWYQYP -P--------LNPMWHGILGFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAIS -NFLMMFCM-SPPMVINCYY-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNV -IVKGLSG-KPLSINGALIRIIAIWLFSLGW-TIAPMFG-W-----NRYVPEGNMTACGTD -YFN--RGLLSASYLVCYGIWVYFVPLFLIIYSYWFIIQAVAAHEKN-------------- -------------------------------------------------------MREQAK -KMN---------------VASLRS------------------------------------ ---------------------SENQNTS------AECKLAKVALMTISLWFMAWTPYLVIN -FSGIF-NL-V--KISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAALFAKFPSLAC--- -----A-AEPSS-DAVSTTSGTTTVTDNEKSNA---------------------------- ------------------------------------------------------------- --- +--------------------------------MIAVSGPSYEA----------------F +SYGG--QARF-------NNQTVVDKVPPDMLH--------LIDANWYQYPPLNPMWHGIL +GFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCM-SPPMVINCY +Y-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSG-KPLSINGALI +RIIAIWLFSLGW-TIAPMFG-W-----NRYVPEGNMTACGTDYFN--RGLLSASYLVCYG +IWVYFVPLFLIIYSYWFIIQAVAAHEKNMREQAKK------------------------- +--------------------------------------------------MN-------- +--VASL------------------------------------------------------ +----------RS-SENQNTS------AECKLAKVALMTISLWFMAWTPYLVINFSGIF-N +L-V--KISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAALFAKFPSLAC-------A-A +EPSS--DAVSTTSGTTTVTD-NEKSNA--------------------------------- +--------------------------------------------------------- > 26== L03781 1 Limulus polyphemus opsin <>[PNAS90,6150-6154'93] -----------------------------------MANQLSY----------SSLG----- --------------WPYQP------NASV----------VDTMPKEMLY--MIHEHWYAFP -P--------MNPLWYSILGVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFS -DFCMMAFM-MPTMTSNCFA-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNV -IVRGMAA-APLTHKKATLLLLFVWIWSGGW-TILPFFG-W-----SRYVPEGNLTSCTVD -YLT--KDWSSASYVVIYGLAVYFLPLITMIYCYFFIVHAVAEHEKQ-------------- -------------------------------------------------------LREQAK -KMN---------------VASLRA------------------------------------ --------------------NADQQKQS------AECRLAKVAMMTVGLWFMAWTPYLIIS -WAGVF-SSGT--RLTPLATIWGSVFAKANSCYNPIVYGISHPRYKAALYQRFPSLAC--- ----GS-GESGS-DVKSEASATTTMEEKPKIPEA--------------------------- ------------------------------------------------------------- --- +----------------------------------MANQLSYSS----------------L +GWPY--QP----------NASVVDTMPKEMLY--------MIHEHWYAFPPMNPLWYSIL +GVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFM-MPTMTSNCF +A-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAA-APLTHKKATL +LLLFVWIWSGGW-TILPFFG-W-----SRYVPEGNLTSCTVDYLT--KDWSSASYVVIYG +LAVYFLPLITMIYCYFFIVHAVAEHEKQLREQAKK------------------------- +--------------------------------------------------MN-------- +--VASL------------------------------------------------------ +----------RANADQQKQS------AECRLAKVAMMTVGLWFMAWTPYLIISWAGVF-S +SGT--RLTPLATIWGSVFAKANSCYNPIVYGISHPRYKAALYQRFPSLAC------GS-G +ESGS--DVKSEASATTTMEE-KPKIPEA-------------------------------- +--------------------------------------------------------- > 27== X07797 1 Octopus dofleini rhodopsin <>[FEBS232(1),69-72'88] ----------------------------------------MV----------ESTT----- --------------LVNQT-WWY--NPTV----------D------------IHPHWAKFD -P--------IPDAVYYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMS -DLSFSAINGFPLKTISAFM-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNV -IGRPMAASKKMSHRRAFLMIIFVWMWSIVW-SVGPVFN-W-----GAYVPEGILTSCSFD -YLS--TDPSTRSFILCMYFCGFMLPIIIIAFCYFNIVMSVSNHEKE-------------- -------------------------------------------------------MAAMAK -RLN---------------AKELR------------------------------------- ---------------------KAQAGAS------AEMKLAKISMVIITQFMLSWSPYAIIA -LLAQF-GPAE--WVTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQ -FDEKE-CEDAN-DAEEEVVASER--GGESRDAAQMKEMMAMMQKMQAQQAAYQPPPPPQG -Y--PPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAY -QA +---------------------------------------MVES----------------T +TLVN--QT-WWY------NPTVD------------------IHPHWAKFDPIPDAVYYSV +GIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAF +M-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFL +MIIFVWMWSIVW-SVGPVFN-W-----GAYVPEGILTSCSFDYLS--TDPSTRSFILCMY +FCGFMLPIIIIAFCYFNIVMSVSNHEKEMAAMAKR------------------------- +--------------------------------------------------LN-------- +--AKEL------------------------------------------------------ +----------R--KAQAGAS------AEMKLAKISMVIITQFMLSWSPYAIIALLAQF-G +PAE--WVTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQFDEKE-C +EDAN--DAEEEVVASER--G-GESRDAAQMKEMMAMMQKMQAQQAAYQPPPPPQGY--PP +QGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAYQA > 28== X70498 1 Todarodes pacificus rhodopsin <retina>[FEBS317(1-2),5-11'93] -----------------------------------------M----------GRDL----- --------------RDNET-WWY--NPSI----------V------------VHPHWREFD -Q--------VPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFS -DFTFSLVNGFPLMTISCFL-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNV -IGRPMAASKKMSHRRAFIMIIFVWLWSVLW-AIGPIFG-W-----GAYTLEGVLCNCSFD -YIS--RDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKE-------------- -------------------------------------------------------MAAMAK -RLN---------------AKELR------------------------------------- ---------------------KAQAGAN------AEMRLAKISIVIVSQFLLSWSPYAVVA -LLAQF-GPLE--WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQ -FDDKE-TEDDK-DAETEIPAGESSDAAPSADAAQMKEMMAMMQKMQQQQAAY----PPQG -YAPPPQGYPPQGY--PPQGYPPQGYPPQGYPP---PPQGAPPQ-GAPPAAPPQGVDNQAY -QA +----------------------------------------MGR----------------D +LRDN--ET-WWY------NPSIV------------------VHPHWREFDQVPDAVYYSL +GIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCF +L-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFI +MIIFVWLWSVLW-AIGPIFG-W-----GAYTLEGVLCNCSFDYIS--RDSTTRSNILCMF +ILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKR------------------------- +--------------------------------------------------LN-------- +--AKEL------------------------------------------------------ +----------R--KAQAGAN------AEMRLAKISIVIVSQFLLSWSPYAVVALLAQF-G +PLE--WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKE-T +EDDK--DAETEIPAGESSDA-APSADAAQMKEMMAMMQKMQQQQAAY----PPQGYAPPP +QGYPPQGY--PPQGYPPQGYPPQGYPP---PPQGAPPQ-GAPPAAPPQGVDNQAYQA > 29== L21195 1 human serotonin 5-HT7 receptor protein <placenta and fetal bra ----------MMDVNSSGRPDLYGHLRSF-LLPEVGRGLPDL----------SPDGGADPV -AGSWAPHLLS---EVTAS-----PAPTW------------DAPPDNAS--GCGEQIN--- ----------YGRVEKVVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALA -DLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLG -ITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQD -F----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF----------- ---------------------------------------------P----GFPRVEPDSVI -ALNG--------------IVKLQ----------------------KEVEECANLSR---- ---------------LLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLS -TARPFICGTSCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQC------ ----QY-RNINR--KLSAAGMHEALKLAER------------------------------- ------------------------------------PERPEFVL-QNADYCRKKGHDS--- --- +---------MMDVNSSGRPDLYGHLRSFL-LPEVGRGLPDLSPDGGA------------D +PVAGSWAPHLLS------EVTASPAPTWDAPPDNASGCGEQIN--------YGRVEKVVI +GSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDL +IGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAK +MILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIYST +AVAFYIPMSVMLFMYYQIY-------KAARKSAAKHKF---------------------- +---------------------------------PGFPRV----EPDSVIALNG------- +--IVKL----------------------QK---------EVEECAN-------------- +----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFIC +GTSCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYR----NINR-- +------KLSAAGMHEALKLAERPERPEF------------VLQNADY------------- +--------------------------------------------CRKKGHDS----- > 30== L15228 1 rat 5HT-7 serotonin receptor <>[JBC268,18200-18204'93] ------------------------------------------------------------ -----MPHLLSGFLEVTAS-----PAPTW------------DAPPDNVS--GCGEQIN--- ----------YGRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALA -DLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLG -ITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQD -F----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF----------- ---------------------------------------------P----GFPRVQPESVI -SLNG--------------VVKLQ----------------------KEVEECANLSR---- ---------------LLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLS -TARPFICGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTSRSLLQC------ ----QY-RNINR--KLSAAGMHEALKLAER------------------------------- ------------------------------------PERSEFVL-QNSDHCGKKGHDT--- --- +------MPHLLS---GFLEVTASPAPTWDAPPDNVSGCGEQIN--------YGRVEKVVI +GSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDL +IGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAK +MILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIYST +AVAFYIPMSVMLFMYYQIY-------KAARKSAAKHKF---------------------- +---------------------------------PGFPRV----QPESVISLNG------- +--VVKL----------------------QK---------EVEECAN-------------- +----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFIC +GTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTSRSLLQCQYR----NINR-- +------KLSAAGMHEALKLAERPERSEF------------VLQNSDH------------- +--------------------------------------------CGKKGHDT----- > 31=p A47425 serotonin receptor 5HT-7 - rat ------------------------------------------------------------ -----MPHLLSGFLEVTAS-----PAPTW------------DAPPDNVS--GCGEQIN--- ----------YGRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALA -DLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLG -ITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQD -F----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF----------- ---------------------------------------------P----GFPRVQPESVI -SLNG--------------VVKLQ----------------------KEVEECANLSR---- ---------------LLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLS -TARPFICGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQC------ ----QY-RNINR--KLSAAGMHEALKLAER------------------------------- ------------------------------------PERSEFVL-QNSDHCGKKGHDT--- --- +------MPHLLS---GFLEVTASPAPTWDAPPDNVSGCGEQIN--------YGRVEKVVI +GSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDL +IGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAK +MILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIYST +AVAFYIPMSVMLFMYYQIY-------KAARKSAAKHKF---------------------- +---------------------------------PGFPRV----QPESVISLNG------- +--VVKL----------------------QK---------EVEECAN-------------- +----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFIC +GTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYR----NINR-- +------KLSAAGMHEALKLAERPERSEF------------VLQNSDH------------- +--------------------------------------------CGKKGHDT----- > 32== M83181 1 human serotonin receptor <>[JBC267(11),7553-7562'92] -----------MDVLSPG------------QGNNTTSPPAPF----------ETGG----- --------------NTTGI-----SDVTV-------------------------------- -------------SYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVT -DLMVSVLV-LPMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWA -ITDPIDYVNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPDA---CTISKD -H----------GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK-------------- --------------------------TVKKVEKTGADTRHGASPAP---------QPKKS- --VNGESGSRNWRL-----GVESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPL -PSEAG--PTPCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVA -LVLPF-CESSC-HMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKC------ ----KF-CRQ--------------------------------------------------- +----------MDVLSP-------------------------------------------- +---------------GQGNNTTSPPAPFET-GGNTTGISDVT---------VSYQ--VIT +SLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQV +L-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAA +LISLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---ACTISKDH----------GYTIYST +FGAFYIPLLLMLVLYGRIF-------RAARFRIRK------------------------- +--------------TVKKVEKTGADTRHGASPAPQPKKS-----------VNGESGSR-- +-------NWRLGVESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAG-- +PTPCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-C +ESSC-HMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC----RQ---- ------------------------------------------------------------ --- +--------------------------------------------------------- > 33=p A35181 serotonin receptor class 1A - rat -----------MDVFSFG------------QGNNTTASQEPF----------GTGG----- --------------NVTSI-----SDVTF-------------------------------- -------------SYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVT -DLMVSVLV-LPMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWA -ITDPIDYVNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPDA---CTISKD -H----------GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK-------------- --------------------------TVRKVEKKGAGTSLGTSSAP---------PPKKS- --LNGQPGSGDWRR-----CAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPL -PSESG--SNSYAPACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVA -LVLPF-CESSC-HMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKC------ ----KF-CRR--------------------------------------------------- +----------MDVFSF-------------------------------------------- +---------------GQGNNTTASQEPFGT-GGNVTSISDVT---------FSYQ--VIT +SLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQV +L-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAA +LISLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---ACTISKDH----------GYTIYST +FGAFYIPLLLMLVLYGRIF-------RAARFRIRK------------------------- +--------------TVRKVEKKGAGTSLGTSSAPPPKKS-----------LNGQPGSG-- +-------DWRRCAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPLPSESG-- +SNSYAPACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-C +ESSC-HMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC----RR---- ------------------------------------------------------------ --- +--------------------------------------------------------- > 34== L06803 1 Lymnaea stagnalis serotonin receptor <>[PNAS90,11-15'93] -MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGL----------SPTG----- --------------LVTSD-----FNDSYGLTGQFINGSHSSRSRDNAS--ANDTSATNMT -DDRYWSLTVYSHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVA -DLMVAVLV-MPLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWA -VTS-IDYIRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQD -K----------GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEE -TTLVASPKTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENAN -GVNSNSSS----------SERLKQIQIETAEAFANGCAEEASIAMLERQ-CNNGKKISSN -DTPYS-------------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIA -LIGPF-VDPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFG------ ----KY-RRGHR------------------------------------------------- +MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGLSPTGLV------------T +SDFN--DSYGLT---GQFINGSHSSRSRDNASANDTSATNMTDDRYWSLTVYSHEHLVLT +SVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEI +S-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILL +MIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GYTIFST +VGAFYLPMLVMMIIYIRIW-------LVARSRIRKDKFQMTKARLKTEETTLVASPKTEY +SVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS--- +-------SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS-- +-----------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-V +DPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYR----RGHR-- ------------------------------------------------------------ --- +--------------------------------------------------------- > 35=p A47174 serotonin receptor, 5HTlym receptor - great pond snail -MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGL----------SPTG----- --------------LVTSD-----FNDSYGLTGQFINGSHSSRSRDNAS--ANDTSATNMT -DDRYWSLTVYSHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVA -DLMVAVLV-MPLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWA -VTS-IDYIRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQD -K----------GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEE -TTLVASPKTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENAN -GVNSNSSS----------SERLKQIQIETAEAFANGCAEEASIAMLERQ-CNNGKKISSN -DTPYS-------------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIA -LIGPF-VDPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFG------ ----KY-RRGHR------------------------------------------------- +MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGLSPTGLV------------T +SDFN--DSYGLT---GQFINGSHSSRSRDNASANDTSATNMTDDRYWSLTVYSHEHLVLT +SVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEI +S-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILL +MIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GYTIFST +VGAFYLPMLVMMIIYIRIW-------LVARSRIRKDKFQMTKARLKTEETTLVASPKTEY +SVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS--- +-------SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS-- +-----------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-V +DPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYR----RGHR-- ------------------------------------------------------------ --- +--------------------------------------------------------- > 36== X95604 1 Bombyx mori serotonin receptor <antennae>[InsectBiochem.Mol.Bi --MEGAEGQEELDWEAL-------YLRLP--LQNCSWNSTGW----------EPNW----- --------------NVTVV-----PNTTW---------WQASAPFDTPA--ALVRAAAK-- -------------------AVVLGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVA -DLLVACLV-MPLGAVYEVV-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWA -VTN-IDYIHASTAKRVGMMIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLRCVVSQD -V----------GYQIFATASSFYVPVLIILILYWRIYQTARKRIR--------------- -------------------------------RRRGATARGGVGPPP---------VPAGGA -LVAGGGSGGIAAAVVAVIGRPLPTISETTTTGFTNVSSNNTS---PEKQSCANGLEADPP -TTGYGAVAAAYYPSLVRRKPKEAADSK------RERKAAKTLAIITGAFVACWLPFFVLA -ILVPT-CDCE---VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLLCG------ ----RR-VRRRR--A---------------------------------------------- ------------------------------------PQ----------------------- --- +-MEGAEGQEELDWEAL-------YLRLP--LQNCSWNSTGWEPNWNV------------T +VVPN--TTWW------------QASAPFDTPAALVRAAAK-------------------- +AVVLGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVADLLVACLV-MPLGAVYEV +V-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWAVTN-IDYIHASTAKRVGM +MIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLRCVVSQDV----------GYQIFAT +ASSFYVPVLIILILYWRIY-------QTARKRIR-------------------------- +-------------------RRRGATARGGVGPPP---------VPAGGALVAGGGSGGIA +AAVVAVIGRPLPTISETTTTGFTNVSS----NNTSP---EKQSCANGLEADPPTTGYGAV +AAAYYPSLVRRKPKEAADSK------RERKAAKTLAIITGAFVACWLPFFVLAILVPT-C +DCE---VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLLCGRRV----RRRR-- +------A---------------PQ------------------------------------ +---------------------------------------------------------