Mercurial > repos > rnateam > mafft
view test-data/mafft_nwns_result.aln @ 5:15974dd17515 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit fc3727b1b39cd5654a523d03e0df2b9ac87ddcda
| author | rnateam |
|---|---|
| date | Tue, 20 Sep 2016 09:30:47 -0400 |
| parents | a4e086689fae |
| children | aaefa93c2dd2 |
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CLUSTAL format alignment by MAFFT NW-NS-2 (v7.221) 1== --------------------------------MNGTE--------------GDNF----- 2== --------------------------------MNGTE--------------GPNF----- 3== --------------------------------MNGTE--------------GINF----- 4=p --------------------------------MNGTE--------------GKNF----- 5=p --------------------------------MNGTE--------------GNNF----- 6== --------------------------------MKQVPEF------------HEDF----- 7== --------------------------------MRKMS--------------EEEF----- 8=opsin, ------------------------------------------------------------ 9== --------------------------------MAQQWSLQRLAGRHPQDSYEDST----- 10== --------------------------------MAQQWSLQRLAGRHPQDSYEDST----- 11== --------------------------------MTEAWNVAVFAARRSRDD-DDTT----- 12== --------------------------------MAA-WEAAFAARRRHEE--EDTT----- 13== --------------------------------MS-----------------SNSS----- 14== ----------MES--GNV-----------SSSLFGNVSTAL----------RPEA----- 15== ----------MEY--HNV-----------SSVL-GNVSSVL----------RPDA----- 16== ----------ME-------------------PLCNASEPPL----------RPEA----- 17== ----------MD-------------------ALCNASEPPL----------RPEA----- 18== --------------------------------MTNATGPQM----------AYYG----- 19== --------------------------------MANVTGPQM----------AFYG----- 20== ---------------MES-----------FAVAAAQLGPHF----------APLS----- 21== ---------------MES-----------FAVAAAQLGPHF----------APLS----- 22== ---------------MDS-----------FAAVATQLGPQF----------AAPS----- 23== ----------MERSHLPE-----------TPFDLAHSGPRF----------QAQS----- 24== ----------MERSLLPE-----------PPLAMALLGPRF----------EAQT----- 25== --------------------------------MIAVSGPSY----------EAFS----- 26== ----------------------------------MANQLSY----------SSLG----- 27== ---------------------------------------MV----------ESTT----- 28== ----------------------------------------M----------GRDL----- 29== ---------MMDVNSSGRPDLYGHLRSF-LLPEVGRGLPDL----------SPDGGADPV 30== ------------------------------------------------------------ 31=p ------------------------------------------------------------ 32== ----------MDVLSPG------------QGNNTTSPPAPF----------ETGG----- 33=p ----------MDVFSFG------------QGNNTTASQEPF----------GTGG----- 34== MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGL----------SPTG----- 35=p MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGL----------SPTG----- 36== -MEGAEGQEELDWEAL-------YLRLP--LQNCSWNSTGW----------EPNW----- 1== -------------YVP-----F-SNKTG----------LARSPYEYPQY-YLAEPWK--- 2== -------------YVP-----F-SNITG----------VVRSPFEQPQY-YLAEPWQ--- 3== -------------YVP-----M-SNKTG----------VVRSPFEYPQY-YLAEPWK--- 4=p -------------YVP-----M-SNRTG----------LVRSPFEYPQY-YLAEPWQ--- 5=p -------------YVP-----L-SNRTG----------LVRSPFEYPQY-YLAEPWQ--- 6== -------------YIPIP-LDI-NNLS------------AYSPFLVPQD-HLGNQGI--- 7== -------------YL------F-KNIS------------SVGPWDGPQY-HIAPVWA--- 8=opsin, ------------------------------------------------------------ 9== -------------QSSI--FTY-TNSNS-----------TRGPFEGPNY-HIAPRWV--- 10== -------------QSSI--FTY-TNSNS-----------TRGPFEGPNY-HIAPRWV--- 11== -------------RGSV--FTY-TNTNN-----------TRGPFEGPNY-HIAPRWV--- 12== -------------RDSV--FTY-TNSNN-----------TRGPFEGPNY-HIAPRWV--- 13== -------------QAP---------PNG-----------TPGPFDGPQWPYQAPQST--- 14== -------------RLSA------ETRLL----------GWNVPPEELR--HIPEHWLTYP 15== -------------RLSA------ESRLL----------GWNVPPDELR--HIPEHWLIYP 16== -------------R-SSG---NGDLQFL----------GWNVPPDQIQ--YIPEHWLTQL 17== -------------RMSSG---SDELQFL----------GWNVPPDQIQ--YIPEHWLTQL 18== -------------AASMD-FGYPEGVSI----------VDFVRPEIKP--YVHQHWYNYP 19== -------------SGAAT-FGYPEGMTV----------ADFVPDRVKH--MVLDHWYNYP 20== ------------------------NGSV----------VDKVTPDMAH--LISPYWNQFP 21== ------------------------NGSV----------VDKVTPDMAH--LISPYWNQFP 22== ------------------------NGSV----------VDKVTPDMAH--LISPYWDQFP 23== -------------SG---------NGSV----------LDNVLPDMAH--LVNPYWSRFA 24== -------------GG---------NRSV----------LDNVLPDMAP--LVNPHWSRFA 25== -------------YGGQARF---NNQTV----------VDKVPPDMLH--LIDANWYQYP 26== -------------WPYQP------NASV----------VDTMPKEMLY--MIHEHWYAFP 27== -------------LVNQT-WWY--NPTV----------D------------IHPHWAKFD 28== -------------RDNET-WWY--NPSI----------V------------VHPHWREFD 29== AGSWAPHLLS---EVTAS-----PAPTW------------DAPPDNAS--GCGEQIN--- 30== ----MPHLLSGFLEVTAS-----PAPTW------------DAPPDNVS--GCGEQIN--- 31=p ----MPHLLSGFLEVTAS-----PAPTW------------DAPPDNVS--GCGEQIN--- 32== -------------NTTGI-----SDVTV-------------------------------- 33=p -------------NVTSI-----SDVTF-------------------------------- 34== -------------LVTSD-----FNDSYGLTGQFINGSHSSRSRDNAS--ANDTSATNMT 35=p -------------LVTSD-----FNDSYGLTGQFINGSHSSRSRDNAS--ANDTSATNMT 36== -------------NVTVV-----PNTTW---------WQASAPFDTPA--ALVRAAAK-- 1== --------------YSALAAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMA 2== --------------FSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA 3== --------------YRLVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVA 4=p --------------FKILALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVA 5=p --------------FKLLAVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVA 6== --------------FMAMSVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIA 7== --------------FYLQAAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFG 8=opsin, ------------------------------------------------------------ 9== --------------YHLTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVA 10== --------------YHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVA 11== --------------YNLVSFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFV 12== --------------YNLTSVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVA 13== --------------YVGVAVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVA 14== E--------PPESMNYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFC 15== E--------PPESMNYLLGTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFC 16== E--------PPASMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVF 17== E--------PPASMHYMLGVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVF 18== P--------VNPMWHYLLGVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALS 19== P--------VNPMWHYLLGVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALS 20== A--------MDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAIS 21== A--------MDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAIS 22== A--------MDPIWAKILTAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAIS 23== P--------MDPMMSKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFS 24== P--------MDPTMSKILGLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFS 25== P--------LNPMWHGILGFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAIS 26== P--------MNPLWYSILGVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFS 27== P--------IPDAVYYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMS 28== Q--------VPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFS 29== ---------YGRVEKVVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALA 30== ---------YGRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALA 31=p ---------YGRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALA 32== ------------SYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVT 33=p ------------SYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVT 34== DDRYWSLTVYSHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVA 35=p DDRYWSLTVYSHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVA 36== ------------------AVVLGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVA 1== NLFMVLFG-FTVTMYTSMN-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIV 2== DLFMVFGG-FTTTLYTSLH-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVV 3== DLFMACFG-FTVTFYTAWN-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIV 4=p GTIMVCFG-FTVTFYTAIN-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIV 5=p GAIMVCFG-FTVTFYTAIN-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIV 6== NLFVAIFG-SPLSFYSFFN-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLV 7== GFLLCIFS-VFPVFVASCN-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIV 8=opsin, DLAETVIA-STISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLV 9== DLAETVIA-STISVVNQVY-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMV 10== DLAETVIA-STISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLV 11== DLVETLVA-STISVFNQIF-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFV 12== DLGETVIA-STISVINQIS-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFV 13== DLLVTLCG-SSVSLSNNIN-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVV 14== DFMMMVK--TPIFIYNSFH-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNV 15== DFMMMIK--TPIFIYNSFH-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNV 16== DLIMCLK--APIF--NSFH-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNV 17== DLIMCLK--APIFIYNSFH-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNV 18== DLIMLTTN-VPFFTYNCFSGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNI 19== DLIMLTTN-FPPFCYNCFSGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNI 20== DFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQV 21== DFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQV 22== DFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQV 23== DFCMMASQ-SPVMIINFYY-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNV 24== DFCMMASQ-SPVMIINFYY-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNV 25== NFLMMFCM-SPPMVINCYY-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNV 26== DFCMMAFM-MPTMTSNCFA-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNV 27== DLSFSAINGFPLKTISAFM-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNV 28== DFTFSLVNGFPLMTISCFL-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNV 29== DLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLG 30== DLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLG 31=p DLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLG 32== DLMVSVLV-LPMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWA 33=p DLMVSVLV-LPMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWA 34== DLMVAVLV-MPLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWA 35=p DLMVAVLV-MPLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWA 36== DLLVACLV-MPLGAVYEVV-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWA . : : * : : :*: 1== ICKPMGN-FRFGNTHAIMGVAFTWIMALAC-AAPPLVG-W-----SRYIPEGMQCSCGPD 2== VCKPMSN-FRFGENHAIMGVAFTWVMALAC-AAPPLVG-W-----SRYIPEGMQCSCGID 3== VCKPMGN-FRFSATHAMMGIAFTWVMAFSC-AAPPLFG-W-----SRYMPEGMQCSCGPD 4=p VCKPMGS-FKFSSSHAFAGIAFTWVMALAC-AAPPLFG-W-----SRYIPEGMQCSCGPD 5=p VCKPMGS-FKFSSTHASAGIAFTWVMAMAC-AAPPLVG-W-----SRYIPEGIQCSCGPD 6== ICKPLGN-FTFKTPHAIAGCILPWISALAA-SLPPLFG-W-----SRYIPEGLQCSCGPD 7== ICKPFGN-FRFSSKHALTVVLATWTIGIGV-SIPPFFG-W-----SRFIPEGLQCSCGPD 8=opsin, VCKPFGN-VRFDAKLAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPD 9== VCKPFGN-VRFDAKLAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPD 10== VCKPFGN-VRFDAKLAIVGIAFSWIWSAVW-TAPPIFG-W-----SRYWPHGLKTSCGPD 11== VCKPFGN-IKFDSKLAIIGIVFSWVWAWGW-SAPPIFG-W-----SRYWPHGLKTSCGPD 12== VCKPFGN-IKFDGKLAVAGILFSWLWSCAW-TAPPIFG-W-----SRYWPHGLKTSCGPD 13== VCKPLGD-FQFQRRHAVSGCAFTWGWALLW-SAPPLLG-W-----SSYVPEGLRTSCGPN 14== ITRPMEG--KMTHGKAIAMIIFIYMYATPW-VVACYTETW-----GRFVPEGYLTSCTFD 15== ITRPMEG--KMTHGKAIAMIIFIYLYATPW-VVACYTESW-----GRFVPEGYLTSCTFD 16== ITKPMNR--NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFD 17== ITKPMNR--NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFD 18== ICNGFNG-PKLTTGKAVVFALISWVIAIGC-ALPPFFG-W-----GNYILEGILDSCSYD 19== ICNGFNG-PKLTQGKATFMCGLAWVISVGW-SLPPFFG-W-----GSYTLEGILDSCSYD 20== IVKGMAG-RPMTIPLALGKM---------------------------YVPEGNLTSCGID 21== IVKGMAG-RPMTIPLALGKIAYIWFMSSIW-CLAPAFG-W-----SRYVPEGNLTSCGID 22== IVKGMAG-RPMTIPLALGKIAYIWFMSTIWCCLAPVFG-W-----SRYVPEGNLTSCGID 23== IVKGING-TPMTIKTSIMKILFIWMMAVFW-TVMPLIG-W-----SAYVPEGNLTACSID 24== IVKGING-TPMTIKTSIMKIAFIWMMAVFW-TIMPLIG-W-----SSYVPEGNLTACSID 25== IVKGLSG-KPLSINGALIRIIAIWLFSLGW-TIAPMFG-W-----NRYVPEGNMTACGTD 26== IVRGMAA-APLTHKKATLLLLFVWIWSGGW-TILPFFG-W-----SRYVPEGNLTSCTVD 27== IGRPMAASKKMSHRRAFLMIIFVWMWSIVW-SVGPVFN-W-----GAYVPEGILTSCSFD 28== IGRPMAASKKMSHRRAFIMIIFVWLWSVLW-AIGPIFG-W-----GAYTLEGVLCNCSFD 29== ITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQD 30== ITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQD 31=p ITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQD 32== ITDPIDYVNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPDA---CTISKD 33=p ITDPIDYVNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPDA---CTISKD 34== VTS-IDYIRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQD 35=p VTS-IDYIRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQD 36== VTN-IDYIHASTAKRVGMMIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLRCVVSQD : : : 1== YYTLNPNFNNESYVVYMFVVHFLVPFVIIFFCYGRLLCTV----KE-------------- 2== YYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTV----KE-------------- 3== YYTHNPDYHNESYVLYMFVIHFIIPVVVIFFSYGRLICKV----RE-------------- 4=p YYTLNPDYNNESYVIYMFVCHFILPVAVIFFTYGRLVCTV----KA-------------- 5=p YYTLNPEYNNESYVLYMFICHFILPVTIIFFTYGRLVCTV----KA-------------- 6== WYTTNNKYNNESYVMFLFCFCFAVPFGTIVFCYGQLLITL----KL-------------- 7== WYTVGTKYRSESYTWFLFIFCFIVPLSLICFSYTQLLRAL----KA-------------- 8=opsin, VFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAI----RA-------------- 9== VFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAI----RA-------------- 10== VFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAI----RA-------------- 11== VFSGSVELGCQSFMLTLMITCCFLPLFIIIVCYLQVWMAI----RA-------------- 12== VFSGSSDPGVQSYMVVLMVTCCFFPLAIIILCYLQVWLAI----RA-------------- 13== WYTGGSNN--NSYILSLFVTCFVLPLSLILFSYTNLLLTL----RA-------------- 14== YLT--DNFDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKA-------------- 15== YLT--DNFDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKA-------------- 16== YLS--DNFDTRLFVGTIFFFSFVCPTLMILYYYSQIVGHVFSHEKA-------------- 17== YLS--DNFDTRLFVGTIFLFSFVVPTLMILYYYSQIVGHVFNHEKA-------------- 18== YLT--QDFNTFSYNIFIFVFDYFLPAAIIVFSYVFIVKAIFAHEAA-------------- 19== YFT--RDMNTITYNICIFIFDFFLPASVIVFSYVFIVKAIFAHEAA-------------- 20== YLE--RDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA-------------- 21== YLE--RDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA-------------- 22== YLE--RDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA-------------- 23== YMT--RMWNPRSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKA-------------- 24== YMT--RQWNPRSYLITYSLFVYYTPLFMICYSYWFIIATVAAHEKA-------------- 25== YFN--RGLLSASYLVCYGIWVYFVPLFLIIYSYWFIIQAVAAHEKN-------------- 26== YLT--KDWSSASYVVIYGLAVYFLPLITMIYCYFFIVHAVAEHEKQ-------------- 27== YLS--TDPSTRSFILCMYFCGFMLPIIIIAFCYFNIVMSVSNHEKE-------------- 28== YIS--RDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKE-------------- 29== F----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF----------- 30== F----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF----------- 31=p F----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF----------- 32== H----------GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK-------------- 33=p H----------GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK-------------- 34== K----------GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEE 35=p K----------GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEE 36== V----------GYQIFATASSFYVPVLIILILYWRIYQTARKRIR--------------- * : * : 1== ------------------------------------------------------AAAAQQ 2== ------------------------------------------------------AAAQQQ 3== ------------------------------------------------------AAAQQQ 4=p ------------------------------------------------------AAAQQQ 5=p ------------------------------------------------------AAAQQQ 6== ------------------------------------------------------AAKAQA 7== ------------------------------------------------------VAAQQQ 8=opsin, ------------------------------------------------------VAKQQK 9== ------------------------------------------------------VAKQQK 10== ------------------------------------------------------VAKQQK 11== ------------------------------------------------------VAAQQK 12== ------------------------------------------------------VAAQQK 13== ------------------------------------------------------AAAQQK 14== ------------------------------------------------------LRDQAK 15== ------------------------------------------------------LRDQAK 16== ------------------------------------------------------LREQAK 17== ------------------------------------------------------LREQAK 18== ------------------------------------------------------MRAQAK 19== ------------------------------------------------------MRAQAK 20== ------------------------------------------------------MREQAK 21== ------------------------------------------------------MREQAK 22== ------------------------------------------------------MREQAK 23== ------------------------------------------------------MREQAK 24== ------------------------------------------------------MRDQAK 25== ------------------------------------------------------MREQAK 26== ------------------------------------------------------LREQAK 27== ------------------------------------------------------MAAMAK 28== ------------------------------------------------------MAAMAK 29== --------------------------------------------P----GFPRVEPDSVI 30== --------------------------------------------P----GFPRVQPESVI 31=p --------------------------------------------P----GFPRVQPESVI 32== -------------------------TVKKVEKTGADTRHGASPAP---------QPKKS- 33=p -------------------------TVRKVEKKGAGTSLGTSSAP---------PPKKS- 34== TTLVASPKTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENAN 35=p TTLVASPKTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENAN 36== ------------------------------RRRGATARGGVGPPP---------VPAGGA 1== ------------------------------------------------------------ 2== ------------------------------------------------------------ 3== ------------------------------------------------------------ 4=p ------------------------------------------------------------ 5=p ------------------------------------------------------------ 6== ------------------------------------------------------------ 7== ------------------------------------------------------------ 8=opsin, ------------------------------------------------------------ 9== ------------------------------------------------------------ 10== ------------------------------------------------------------ 11== ------------------------------------------------------------ 12== ------------------------------------------------------------ 13== ------------------------------------------------------------ 14== KMN---------------VESLRS------------------------------------ 15== KMN---------------VDSLRS------------------------------------ 16== KMN---------------VESLRS------------------------------------ 17== KMN---------------VESLRS------------------------------------ 18== KMN---------------VSTLRS------------------------------------ 19== KMN---------------VTNLRS------------------------------------ 20== KMN---------------VKSLRS------------------------------------ 21== KMN---------------VKSLRS------------------------------------ 22== KMN---------------VKSLRS------------------------------------ 23== KMN---------------VKSLRS------------------------------------ 24== KMN---------------VKSLRS------------------------------------ 25== KMN---------------VASLRS------------------------------------ 26== KMN---------------VASLRA------------------------------------ 27== RLN---------------AKELR------------------------------------- 28== RLN---------------AKELR------------------------------------- 29== ALNG--------------IVKLQ----------------------KEVEECANLSR---- 30== SLNG--------------VVKLQ----------------------KEVEECANLSR---- 31=p SLNG--------------VVKLQ----------------------KEVEECANLSR---- 32== -VNGESGSRNWRL-----GVESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPL 33=p -LNGQPGSGDWRR-----CAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPL 34== GVNSNSSS----------SERLKQIQIETAEAFANGCAEEASIAMLERQ-CNNGKKISSN 35=p GVNSNSSS----------SERLKQIQIETAEAFANGCAEEASIAMLERQ-CNNGKKISSN 36== LVAGGGSGGIAAAVVAVIGRPLPTISETTTTGFTNVSSNNTS---PEKQSCANGLEADPP 1== --------------------ESASTQK------AEKEVTRMVVLMVIGFLVCWVPYASVA 2== --------------------ESATTQK------AEKEVTRMVIIMVIFFLICWLPYASVA 3== --------------------ESATTQK------AEKEVTRMVILMVLGFMLAWTPYAVVA 4=p --------------------DSASTQK------AEREVTKMVILMVFGFLIAWTPYATVA 5=p --------------------DSASTQK------AEREVTKMVILMVLGFLVAWTPYATVA 6== --------------------DSASTQK------AEREVTKMVVVMVLGFLVCWAPYASFS 7== --------------------ESATTQK------AEREVSRMVVVMVGSFCVCYVPYAAFA 8=opsin, --------------------ESESTQK------AEKEVTRMVVVMVLAFC---------- 9== --------------------ESESTQK------AEKEVTRMVVVMVLAFCFCWGPYAFFA 10== --------------------ESESTQK------AEKEVTRMVVVMIFAYCVCWGPYTFFA 11== --------------------ESESTQK------AEREVSRMVVVMIVAFCICWGPYASFV 12== --------------------ESESTQK------AEKEVSRMVVVMIVAYCFCWGPYTFFA 13== --------------------EADTTQR------AEREVTRMVIVMVMAFLLCWLPYSTFA 14== -------------------NVDKNKET------AEIRIAKAAITICFLFFCSWTPYGVMS 15== -------------------NVDKSKEA------AEIRIAKAAITICFLFFASWTPYGVMS 16== -------------------NVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMS 17== -------------------NVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMS 18== --------------------NEADAQR------AEIRIAKTALVNVSLWFICWTPYALIS 19== --------------------NEAETQR------AEIRIAKTALVNVSLWFICWTPYAAIT 20== --------------------SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVIN 21== --------------------SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVIN 22== --------------------SEDADKS------AEGKLAKVALVTISLWFMAWTPYLVIN 23== --------------------SEDCDKS------AEGKLAKVALTTISLWFMAWTPYLVIC 24== --------------------SEDCDKS------AENKLAKVALTTISLWFMAWTPYLIIC 25== --------------------SENQNTS------AECKLAKVALMTISLWFMAWTPYLVIN 26== -------------------NADQQKQS------AECRLAKVAMMTVGLWFMAWTPYLIIS 27== --------------------KAQAGAS------AEMKLAKISMVIITQFMLSWSPYAIIA 28== --------------------KAQAGAN------AEMRLAKISIVIVSQFLLSWSPYAVVA 29== --------------LLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLS 30== --------------LLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLS 31=p --------------LLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLS 32== PSEAG--PTPCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVA 33=p PSESG--SNSYAPACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVA 34== DTPYS-------------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIA 35=p DTPYS-------------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIA 36== TTGYGAVAAAYYPSLVRRKPKEAADSK------RERKAAKTLAIITGAFVACWLPFFVLA * . : 1== FYIFT-HQGS--DFGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCMITTLCC------ 2== MYIFT-HQGS--NFGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLCC------ 3== FWIFT-NKGA--DFTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICC------ 4=p AWIFF-NKGA--DFSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIFC------ 5=p AWIFF-NKGA--AFSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLFC------ 6== LWIVS-HRGE--EFDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCMM-KMVC------ 7== MYMVN-NRNH--GLDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACIM-KMVC------ 8=opsin, ------------------------------------------------------------ 9== CFAAA-NPGY--PFHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCIL-QLF------- 10== CFAAA-NPGY--AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCIL-QLF------- 11== SFAAA-NPGY--AFHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCIM-QLF------- 12== CFAAA-NPGY--AFHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCIL-QLF------- 13== LVVAT-HKGI--IIQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCLL-EMLCCGY--- 14== LIGAF-GDKT--LLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCPWLAL--- 15== LIGAF-GDKT--LLTPGATMIPACTCKMVACIDPFVYAISHPRYRMELQKRCPWLAI--- 16== LIGAF-GDKS--LLTQGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCPWLGV--- 17== LIGAF-GDKS--LLTPGATMIPACTCKLVACIEPFVYAISHPRYRMELQKRCPWLGV--- 18== LKGVM-GDTS--GITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAITQHLPWFCV--- 19== IQGLL-GNAE--GITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAITQHLPWFCV--- 20== CMGLF-KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF--- 21== CMGLF-KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF--- 22== CMGLF-KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF--- 23== YFGLF-KI-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCPMCVF--- 24== YFGLF-KI-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVLKEKCPMCVC--- 25== FSGIF-NL-V--KISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAALFAKFPSLAC--- 26== WAGVF-SSGT--RLTPLATIWGSVFAKANSCYNPIVYGISHPRYKAALYQRFPSLAC--- 27== LLAQF-GPAE--WVTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQ 28== LLAQF-GPLE--WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQ 29== TARPFICGTSCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQC------ 30== TARPFICGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTSRSLLQC------ 31=p TARPFICGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQC------ 32== LVLPF-CESSC-HMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKC------ 33=p LVLPF-CESSC-HMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKC------ 34== LIGPF-VDPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFG------ 35=p LIGPF-VDPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFG------ 36== ILVPT-CDCE---VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLLCG------ 1== --GKNPLGDDE--SGASTSKTEVSSVS-TSPVS--------------------------- 2== --GKNPLGDDE--ASATASKTE------TSQVA--------------------------- 3== --GKNPFGDEDVSSTVSQSKTEVSSVS-SSQVS--------------------------- 4=p --GKNPLGDDE-SSTVSTSKTEVSS------VS--------------------------- 5=p --GKNPLGDEE-SSTVSTSKTEVSS------VS--------------------------- 6== --GKN-IEEDE--ASTSSQVTQVSS------VA--------------------------- 7== --GKA-MTDES--DTCSSQKTEVSTVS-STQVG--------------------------- 8=opsin, ------------------------------------------------------------ 9== --GKK-VDDGS--ELSSASKTEVSSV---SSVS--------------------------- 10== --GKK-VDDGS--ELSSASKTEVSSV---SSVS--------------------------- 11== --GKK-VDDGS--EASTTSRTEVSSVS-NSSVA--------------------------- 12== --GKK-VDDGS--EVST-SRTEVSSVS-NSSVS--------------------------- 13== -QPQR-TGKAS--PGTPGPHADVTAAGLRNKVM--------------------------- 14== ---NE-KAPES----SAVASTSTTQEPQQTTAA--------------------------- 15== ---SE-KAPES----RAAISTSTTQEQQQTTAA--------------------------- 16== ---NE-KSGEI----SSAQSTTTQEQ-QQTTAA--------------------------- 17== ---NE-KSGEA----SSAQSTTTQEQTQQTSAA--------------------------- 18== ---HE-TETKS-NDDSQSNSTVAQDKA--------------------------------- 19== ---HE-KDPND-VEENQSSNTQTQEKS--------------------------------- 20== ---GK-VDDGK-SSDAQSQATASEAESKA------------------------------- 21== ---GK-VDDGK-SSDAQSQATASEAESKA------------------------------- 22== ---GK-VDDGK-SSEAQSQATTSEAESKA------------------------------- 23== ---GN-TDEPKPDAPASDTETTSEADSKA------------------------------- 24== ---GT-TDEPKPDAPPSDTETTSEAESKD------------------------------- 25== ----A-AEPSS-DAVSTTSGTTTVTDNEKSNA---------------------------- 26== ---GS-GESGS-DVKSEASATTTMEEKPKIPEA--------------------------- 27== FDEKE-CEDAN-DAEEEVVASER--GGESRDAAQMKEMMAMMQKMQAQQAAYQPPPPPQG 28== FDDKE-TEDDK-DAETEIPAGESSDAAPSADAAQMKEMMAMMQKMQQQQAAY----PPQG 29== ---QY-RNINR--KLSAAGMHEALKLAER------------------------------- 30== ---QY-RNINR--KLSAAGMHEALKLAER------------------------------- 31=p ---QY-RNINR--KLSAAGMHEALKLAER------------------------------- 32== ---KF-CRQ--------------------------------------------------- 33=p ---KF-CRR--------------------------------------------------- 34== ---KY-RRGHR------------------------------------------------- 35=p ---KY-RRGHR------------------------------------------------- 36== ---RR-VRRRR--A---------------------------------------------- 1== -----------------------------------PA----------------------- 2== -----------------------------------PA----------------------- 3== -----------------------------------PA----------------------- 4=p -----------------------------------PA----------------------- 5=p -----------------------------------PA----------------------- 6== -----------------------------------PEK---------------------- 7== -----------------------------------PN----------------------- 8=opsin, ------------------------------------------------------------ 9== -----------------------------------PA----------------------- 10== -----------------------------------PA----------------------- 11== -----------------------------------PA----------------------- 12== -----------------------------------PA----------------------- 13== -----------------------------------PAHPV-------------------- 14== ------------------------------------------------------------ 15== ------------------------------------------------------------ 16== ------------------------------------------------------------ 17== ------------------------------------------------------------ 18== ------------------------------------------------------------ 19== ------------------------------------------------------------ 20== ------------------------------------------------------------ 21== ------------------------------------------------------------ 22== ------------------------------------------------------------ 23== ------------------------------------------------------------ 24== ------------------------------------------------------------ 25== ------------------------------------------------------------ 26== ------------------------------------------------------------ 27== Y--PPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAY 28== YAPPPQGYPPQGY--PPQGYPPQGYPPQGYPP---PPQGAPPQ-GAPPAAPPQGVDNQAY 29== -----------------------------------PERPEFVL-QNADYCRKKGHDS--- 30== -----------------------------------PERSEFVL-QNSDHCGKKGHDT--- 31=p -----------------------------------PERSEFVL-QNSDHCGKKGHDT--- 32== ------------------------------------------------------------ 33=p ------------------------------------------------------------ 34== ------------------------------------------------------------ 35=p ------------------------------------------------------------ 36== -----------------------------------PQ----------------------- 1== -- 2== -- 3== -- 4=p -- 5=p -- 6== -- 7== -- 8=opsin, -- 9== -- 10== -- 11== -- 12== -- 13== -- 14== -- 15== -- 16== -- 17== -- 18== -- 19== -- 20== -- 21== -- 22== -- 23== -- 24== -- 25== -- 26== -- 27== QA 28== QA 29== -- 30== -- 31=p -- 32== -- 33=p -- 34== -- 35=p -- 36== --