Mercurial > repos > rnateam > mafft
view test-data/mafft_add_result.aln @ 16:8e649f27aa0d draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 3d98df472498e1273369d23822d10db14f337443
| author | bgruening |
|---|---|
| date | Thu, 22 Aug 2024 19:20:24 +0000 |
| parents | aaefa93c2dd2 |
| children |
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> 1== M63632 1 Lampetra japonica rhodopsin <>[BBRC174,1125-1132'91] ----------------------------------------MNG----------------T E--G--DNFYVP----FSNKTGLARSPYEYPQY-------YLAEPWK---------YSAL AAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-FTVTMYTSM N-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIVICKPMGN-FRFGNTHAIM GVAFTWIMALAC-AAPPLVG-W-----SRYIPEGMQCSCGPDYYTLNPNFNNESYVVYMF VVHFLVPFVIIFFCYGRLLCTV----KEAAAAQQ-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ -------------ESASTQK------AEKEVTRMVVLMVIGFLVCWVPYASVAFYIFT-H QGS--DFGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCMITTLCC--------GKNPL GDDE--SGASTSKTEVSSVS-TSPVSPA-------------------------------- --------------------------------------------------------- > 2== U22180 1 rat opsin <rod>[J.Mol.Neurosci.5(3),207-209'94] ----------------------------------------MNG----------------T E--G--PNFYVP----FSNITGVVRSPFEQPQY-------YLAEPWQ---------FSML AAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSL H-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSN-FRFGENHAIM GVAFTWVMALAC-AAPPLVG-W-----SRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMF VVHFTIPMIVIFFCYGQLVFTV----KEAAAQQQ-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ -------------ESATTQK------AEKEVTRMVIIMVIFFLICWLPYASVAMYIFT-H QGS--NFGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLCC--------GKNPL GDDE--ASATASKTE------TSQVAPA-------------------------------- --------------------------------------------------------- > 3== M92038 1 chicken green sensitive cone opsin <retina>[PNAS89,5932-5936'9 ----------------------------------------MNG----------------T E--G--INFYVP----MSNKTGVVRSPFEYPQY-------YLAEPWK---------YRLV CCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-FTVTFYTAW N-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGN-FRFSATHAMM GIAFTWVMAFSC-AAPPLFG-W-----SRYMPEGMQCSCGPDYYTHNPDYHNESYVLYMF VIHFIIPVVVIFFSYGRLICKV----REAAAQQQ-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ -------------ESATTQK------AEKEVTRMVILMVLGFMLAWTPYAVVAFWIFT-N KGA--DFTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICC--------GKNPF GDEDVSSTVSQSKTEVSSVS-SSQVSPA-------------------------------- --------------------------------------------------------- > 4=p A45229 opsin, green-sensitive (clone GFgr-1) - goldfish ----------------------------------------MNG----------------T E--G--KNFYVP----MSNRTGLVRSPFEYPQY-------YLAEPWQ---------FKIL ALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-FTVTFYTAI N-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSSSHAFA GIAFTWVMALAC-AAPPLFG-W-----SRYIPEGMQCSCGPDYYTLNPDYNNESYVIYMF VCHFILPVAVIFFTYGRLVCTV----KAAAAQQQ-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ -------------DSASTQK------AEREVTKMVILMVFGFLIAWTPYATVAAWIFF-N KGA--DFSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIFC--------GKNPL GDDE-SSTVSTSKTEVSS------VSPA-------------------------------- --------------------------------------------------------- > 5=p B45229 opsin, green-sensitive (clone GFgr-2) - goldfish ----------------------------------------MNG----------------T E--G--NNFYVP----LSNRTGLVRSPFEYPQY-------YLAEPWQ---------FKLL AVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-FTVTFYTAI N-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSSTHASA GIAFTWVMAMAC-AAPPLVG-W-----SRYIPEGIQCSCGPDYYTLNPEYNNESYVLYMF ICHFILPVTIIFFTYGRLVCTV----KAAAAQQQ-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ -------------DSASTQK------AEREVTKMVILMVLGFLVAWTPYATVAAWIFF-N KGA--AFSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLFC--------GKNPL GDEE-SSTVSTSKTEVSS------VSPA-------------------------------- --------------------------------------------------------- > 6== L11864 1 Carassius auratus blue cone opsin <retina>[Biochemistry32,208- ----------------------------------------MKQ----------------V PEFH--EDFYIPIPLDINNLS--AYSPFLVPQD-------HLGNQGI---------FMAM SVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-SPLSFYSFF N-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGN-FTFKTPHAIA GCILPWISALAA-SLPPLFG-W-----SRYIPEGLQCSCGPDWYTTNNKYNNESYVMFLF CFCFAVPFGTIVFCYGQLLITL----KLAAKAQA-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ -------------DSASTQK------AEREVTKMVVVMVLGFLVCWAPYASFSLWIVS-H RGE--EFDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCMM-KMVC--------GKN-I EEDE--ASTSSQVTQVSS------VAPEK------------------------------- --------------------------------------------------------- > 7== M13299 1 human BCP <>[Science232(4747),193-202'86] ----------------------------------------MRK----------------M S--E--EEFYL-----FKNIS--SVGPWDGPQY-------HIAPVWA---------FYLQ AAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFS-VFPVFVASC N-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGN-FRFSSKHALT VVLATWTIGIGV-SIPPFFG-W-----SRFIPEGLQCSCGPDWYTVGTKYRSESYTWFLF IFCFIVPLSLICFSYTQLLRAL----KAVAAQQQ-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ -------------ESATTQK------AEREVSRMVVVMVGSFCVCYVPYAAFAMYMVN-N RNH--GLDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACIM-KMVC--------GKA-M TDES--DTCSSQKTEVSTVS-STQVGPN-------------------------------- --------------------------------------------------------- > 8=opsin, greensensitive human (fragment) S07060 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------DLAETVIA-STISIVNQV S-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLAIV GIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLM VTCCITPLSIIVLCYLQVWLAI----RAVAKQQK-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ -------------ESESTQK------AEKEVTRMVVVMVLAFC----------------- ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------------------------------- > 9== K03494 1 human GCP <>[Science232(4747),193-202'86] ----------------------------------------MAQQWSLQRLAGRHPQDSYE DSTQ--SSIFT-----YTNSNS-TRGPFEGPNY-------HIAPRWV---------YHLT SVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISVVNQV Y-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGN-VRFDAKLAIV GIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLM VTCCITPLSIIVLCYLQVWLAI----RAVAKQQK-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ -------------ESESTQK------AEKEVTRMVVVMVLAFCFCWGPYAFFACFAAA-N PGY--PFHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCIL-QLF---------GKK-V DDGS--ELSSASKTEVSSV---SSVSPA-------------------------------- --------------------------------------------------------- > 10== Z68193 1 human Red Opsin <>[] ----------------------------------------MAQQWSLQRLAGRHPQDSYE DSTQ--SSIFT-----YTNSNS-TRGPFEGPNY-------HIAPRWV---------YHLT SVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISIVNQV S-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLAIV GIAFSWIWSAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLM VTCCIIPLAIIMLCYLQVWLAI----RAVAKQQK-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ -------------ESESTQK------AEKEVTRMVVVMIFAYCVCWGPYTFFACFAAA-N PGY--AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCIL-QLF---------GKK-V DDGS--ELSSASKTEVSSV---SSVSPA-------------------------------- --------------------------------------------------------- > 11== M92036 1 Gecko gecko P521 <retina>[PNAS89,6841-6845'92] ----------------------------------------MTEAWNVAVFAARRSRDD-D DTTR--GSVFT-----YTNTNN-TRGPFEGPNY-------HIAPRWV---------YNLV SFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-STISVFNQI F-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGN-IKFDSKLAII GIVFSWVWAWGW-SAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSVELGCQSFMLTLM ITCCFLPLFIIIVCYLQVWMAI----RAVAAQQK-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ -------------ESESTQK------AEREVSRMVVVMIVAFCICWGPYASFVSFAAA-N PGY--AFHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCIM-QLF---------GKK-V DDGS--EASTTSRTEVSSVS-NSSVAPA-------------------------------- --------------------------------------------------------- > 12== M62903 1 chicken visual pigment <>[BBRC173,1212-1217'90] ----------------------------------------MAA-WEAAFAARRRHEE--E DTTR--DSVFT-----YTNSNN-TRGPFEGPNY-------HIAPRWV---------YNLT SVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-STISVINQI S-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGN-IKFDGKLAVA GILFSWLWSCAW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSDPGVQSYMVVLM VTCCFFPLAIIILCYLQVWLAI----RAVAAQQK-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ -------------ESESTQK------AEKEVSRMVVVMIVAYCFCWGPYTFFACFAAA-N PGY--AFHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCIL-QLF---------GKK-V DDGS--EVST-SRTEVSSVS-NSSVSPA-------------------------------- --------------------------------------------------------- > 13== S75720 1 chicken P-opsin <>[Science267(5203),1502-1506'95] ----------------------------------------MS-----------------S NSSQ--AP-----------PNG-TPGPFDGPQW------PYQAPQST---------YVGV AVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-SSVSLSNNI N-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGD-FQFQRRHAVS GCAFTWGWALLW-SAPPLLG-W-----SSYVPEGLRTSCGPNWYTGGSNN--NSYILSLF VTCFVLPLSLILFSYTNLLLTL----RAAAAQQK-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ -------------EADTTQR------AEREVTRMVIVMVMAFLLCWLPYSTFALVVAT-H KGI--IIQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCLL-EMLCCGY----QPQR-T GKAS--PGTPGPHADVTAAGLRNKVMPAHPV----------------------------- --------------------------------------------------------- > 14== M17718 1 D.melanogaster Rh3 <>[J.Neurosci.7,1550-1557'87] ----------MESGNVSS------------SLFGNVST-ALRP----------------E ARLS--A----------ETRLLGWNVPPEELR--------HIPEHWLTYPEPPESMNYLL GTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK--TPIFIYNSF H-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG--KMTHGKAIA MIIFIYMYATPW-VVACYTETW-----GRFVPEGYLTSCTFDYLT--DNFDTRLFVACIF FFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKK------------------------- --------------------------------------------------MN-------- --VESL------------------------------------------------------ ----------RSNVDKNKET------AEIRIAKAAITICFLFFCSWTPYGVMSLIGAF-G DKT--LLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCPWLAL---------N EKAP--ESSAVASTSTTQEP--QQTTAA-------------------------------- --------------------------------------------------------- > 15== X65879 1 Drosophila pseudoobscura Dpse\Rh3 <>[Genetics132(1),193-204'92 ----------MEYHNVSS------------VL-GNVSS-VLRP----------------D ARLS--A----------ESRLLGWNVPPDELR--------HIPEHWLIYPEPPESMNYLL GTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK--TPIFIYNSF H-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG--KMTHGKAIA MIIFIYLYATPW-VVACYTESW-----GRFVPEGYLTSCTFDYLT--DNFDTRLFVACIF FFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKK------------------------- --------------------------------------------------MN-------- --VDSL------------------------------------------------------ ----------RSNVDKSKEA------AEIRIAKAAITICFLFFASWTPYGVMSLIGAF-G DKT--LLTPGATMIPACTCKMVACIDPFVYAISHPRYRMELQKRCPWLAI---------S EKAP--ESRAAISTSTTQEQ--QQTTAA-------------------------------- --------------------------------------------------------- > 16== M17730 1 D.melanogaster Rh4 opsin <>[J.Neurosci.7,1558-1566'87] ----------ME------------------PL-CNASEPPLRP----------------E AR-S--SG---N----GDLQFLGWNVPPDQIQ--------YIPEHWLTQLEPPASMHYML GVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIF--NSF H-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVI MNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLFVGTIF FFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKK------------------------- --------------------------------------------------MN-------- --VESL------------------------------------------------------ ----------RSNVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMSLIGAF-G DKS--LLTQGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCPWLGV---------N EKSG--EISSAQST-TTQEQ--QQTTAA-------------------------------- --------------------------------------------------------- > 17== X65880 1 Drosophila pseudoobscura Dpse\Rh4 <>[Genetics132(1),193-204'92 ----------MD------------------AL-CNASEPPLRP----------------E ARMS--SG---S----DELQFLGWNVPPDQIQ--------YIPEHWLTQLEPPASMHYML GVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIFIYNSF H-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVI MNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLFVGTIF LFSFVVPTLMILYYYSQIVGHVFNHEKALREQAKK------------------------- --------------------------------------------------MN-------- --VESL------------------------------------------------------ ----------RSNVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMSLIGAF-G DKS--LLTPGATMIPACTCKLVACIEPFVYAISHPRYRMELQKRCPWLGV---------N EKSG--EASSAQST-TTQEQ-TQQTSAA-------------------------------- --------------------------------------------------------- > 18== D50584 1 Hemigrapsus sanguineus opsin BcRh2 <compound eye>[J.Exp.Biol.1 --------------------------------MTNATGPQMAY----------------Y GAAS--MD-FGY----PEGVSIVDFVRPEIKP--------YVHQHWYNYPPVNPMWHYLL GVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTN-VPFFTYNCF SGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNIICNGFNG-PKLTTGKAVV FALISWVIAIGC-ALPPFFG-W-----GNYILEGILDSCSYDYLT--QDFNTFSYNIFIF VFDYFLPAAIIVFSYVFIVKAIFAHEAAMRAQAKK------------------------- --------------------------------------------------MN-------- --VSTL------------------------------------------------------ ----------RS-NEADAQR------AEIRIAKTALVNVSLWFICWTPYALISLKGVM-G DTS--GITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAITQHLPWFCV------HE-T ETKS--NDDSQSNSTVAQDK-A-------------------------------------- --------------------------------------------------------- > 19== D50583 1 Hemigrapsus sanguineus opsin BcRh1 <compound eye>[J.Exp.Biol.1 --------------------------------MANVTGPQMAF----------------Y GSGA--AT-FGY----PEGMTVADFVPDRVKH--------MVLDHWYNYPPVNPMWHYLL GVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTN-FPPFCYNCF SGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNIICNGFNG-PKLTQGKATF MCGLAWVISVGW-SLPPFFG-W-----GSYTLEGILDSCSYDYFT--RDMNTITYNICIF IFDFFLPASVIVFSYVFIVKAIFAHEAAMRAQAKK------------------------- --------------------------------------------------MN-------- --VTNL------------------------------------------------------ ----------RS-NEAETQR------AEIRIAKTALVNVSLWFICWTPYAAITIQGLL-G NAE--GITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAITQHLPWFCV------HE-K DPND--VEENQSSNTQTQEK-S-------------------------------------- --------------------------------------------------------- > 20== K02320 1 D.melanogaster opsin <>[Cell40,851-858'85] ----------ME----SF------------AVAAAQLGPHFAP----------------L S-----------------NGSVVDKVTPDMAH--------LISPYWNQFPAMDPIWAKIL TAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLY F-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG KM---------------------------YVPEGNLTSCGIDYLE--RDWNPRSYLIFYS IFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKK------------------------- --------------------------------------------------MN-------- --VKSL------------------------------------------------------ ----------RS-SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVINCMGLF-K F-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-V DDGK--SSDAQSQA-TASEA-ESKA----------------------------------- --------------------------------------------------------- > 21== K02315 1 D.melanogaster ninaE <>[Cell40,839-850'85] ----------ME----SF------------AVAAAQLGPHFAP----------------L S-----------------NGSVVDKVTPDMAH--------LISPYWNQFPAMDPIWAKIL TAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLY F-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG KIAYIWFMSSIW-CLAPAFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSYLIFYS IFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKK------------------------- --------------------------------------------------MN-------- --VKSL------------------------------------------------------ ----------RS-SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVINCMGLF-K F-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-V DDGK--SSDAQSQA-TASEA-ESKA----------------------------------- --------------------------------------------------------- > 22== X65877 1 Drosophila pseudoobscura Dpse\ninaE <>[Genetics132(1),193-204' ----------MD----SF------------AAVATQLGPQFAA----------------P S-----------------NGSVVDKVTPDMAH--------LISPYWDQFPAMDPIWAKIL TAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLY F-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG KIAYIWFMSTIWCCLAPVFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSYLIFYS IFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKK------------------------- --------------------------------------------------MN-------- --VKSL------------------------------------------------------ ----------RS-SEDADKS------AEGKLAKVALVTISLWFMAWTPYLVINCMGLF-K F-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-V DDGK--SSEAQSQA-TTSEA-ESKA----------------------------------- --------------------------------------------------------- > 23== M12896 1 D.melanogaster Rh2 <>[Cell44,705-710'86] -----MERSHLP----ET------------PFDLAHSGPRFQA----------------Q SSG---------------NGSVLDNVLPDMAH--------LVNPYWSRFAPMDPMMSKIL GLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFY Y-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIM KILFIWMMAVFW-TVMPLIG-W-----SAYVPEGNLTACSIDYMT--RMWNPRSYLITYS LFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKK------------------------- --------------------------------------------------MN-------- --VKSL------------------------------------------------------ ----------RS-SEDCDKS------AEGKLAKVALTTISLWFMAWTPYLVICYFGLF-K I-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCPMCVF------GN-T DEPK--PDAPASDTETTSEA-DSKA----------------------------------- --------------------------------------------------------- > 24== X65878 1 Drosophila pseudoobscura Dpse\Rh2 <>[Genetics132(1),193-204'92 -----MERSLLP----EP------------PLAMALLGPRFEA----------------Q TGG---------------NRSVLDNVLPDMAP--------LVNPHWSRFAPMDPTMSKIL GLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFY Y-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIM KIAFIWMMAVFW-TIMPLIG-W-----SSYVPEGNLTACSIDYMT--RQWNPRSYLITYS LFVYYTPLFMICYSYWFIIATVAAHEKAMRDQAKK------------------------- --------------------------------------------------MN-------- --VKSL------------------------------------------------------ ----------RS-SEDCDKS------AENKLAKVALTTISLWFMAWTPYLIICYFGLF-K I-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVLKEKCPMCVC------GT-T DEPK--PDAPPSDTETTSEA-ESKD----------------------------------- --------------------------------------------------------- > 25== U26026 1 Apis mellifera long-wavelength rhodopsin <>[] --------------------------------MIAVSGPSYEA----------------F SYGG--QARF-------NNQTVVDKVPPDMLH--------LIDANWYQYPPLNPMWHGIL GFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCM-SPPMVINCY Y-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSG-KPLSINGALI RIIAIWLFSLGW-TIAPMFG-W-----NRYVPEGNMTACGTDYFN--RGLLSASYLVCYG IWVYFVPLFLIIYSYWFIIQAVAAHEKNMREQAKK------------------------- --------------------------------------------------MN-------- --VASL------------------------------------------------------ ----------RS-SENQNTS------AECKLAKVALMTISLWFMAWTPYLVINFSGIF-N L-V--KISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAALFAKFPSLAC-------A-A EPSS--DAVSTTSGTTTVTD-NEKSNA--------------------------------- --------------------------------------------------------- > 26== L03781 1 Limulus polyphemus opsin <>[PNAS90,6150-6154'93] ----------------------------------MANQLSYSS----------------L GWPY--QP----------NASVVDTMPKEMLY--------MIHEHWYAFPPMNPLWYSIL GVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFM-MPTMTSNCF A-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAA-APLTHKKATL LLLFVWIWSGGW-TILPFFG-W-----SRYVPEGNLTSCTVDYLT--KDWSSASYVVIYG LAVYFLPLITMIYCYFFIVHAVAEHEKQLREQAKK------------------------- --------------------------------------------------MN-------- --VASL------------------------------------------------------ ----------RANADQQKQS------AECRLAKVAMMTVGLWFMAWTPYLIISWAGVF-S SGT--RLTPLATIWGSVFAKANSCYNPIVYGISHPRYKAALYQRFPSLAC------GS-G ESGS--DVKSEASATTTMEE-KPKIPEA-------------------------------- --------------------------------------------------------- > 27== X07797 1 Octopus dofleini rhodopsin <>[FEBS232(1),69-72'88] ---------------------------------------MVES----------------T TLVN--QT-WWY------NPTVD------------------IHPHWAKFDPIPDAVYYSV GIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAF M-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFL MIIFVWMWSIVW-SVGPVFN-W-----GAYVPEGILTSCSFDYLS--TDPSTRSFILCMY FCGFMLPIIIIAFCYFNIVMSVSNHEKEMAAMAKR------------------------- --------------------------------------------------LN-------- --AKEL------------------------------------------------------ ----------R--KAQAGAS------AEMKLAKISMVIITQFMLSWSPYAIIALLAQF-G PAE--WVTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQFDEKE-C EDAN--DAEEEVVASER--G-GESRDAAQMKEMMAMMQKMQAQQAAYQPPPPPQGY--PP QGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAYQA > 28== X70498 1 Todarodes pacificus rhodopsin <retina>[FEBS317(1-2),5-11'93] ----------------------------------------MGR----------------D LRDN--ET-WWY------NPSIV------------------VHPHWREFDQVPDAVYYSL GIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCF L-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFI MIIFVWLWSVLW-AIGPIFG-W-----GAYTLEGVLCNCSFDYIS--RDSTTRSNILCMF ILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKR------------------------- --------------------------------------------------LN-------- --AKEL------------------------------------------------------ ----------R--KAQAGAN------AEMRLAKISIVIVSQFLLSWSPYAVVALLAQF-G PLE--WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKE-T EDDK--DAETEIPAGESSDA-APSADAAQMKEMMAMMQKMQQQQAAY----PPQGYAPPP QGYPPQGY--PPQGYPPQGYPPQGYPP---PPQGAPPQ-GAPPAAPPQGVDNQAYQA > 29== L21195 1 human serotonin 5-HT7 receptor protein <placenta and fetal bra ---------MMDVNSSGRPDLYGHLRSFL-LPEVGRGLPDLSPDGGA------------D PVAGSWAPHLLS------EVTASPAPTWDAPPDNASGCGEQIN--------YGRVEKVVI GSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDL IGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAK MILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIYST AVAFYIPMSVMLFMYYQIY-------KAARKSAAKHKF---------------------- ---------------------------------PGFPRV----EPDSVIALNG------- --IVKL----------------------QK---------EVEECAN-------------- ----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFIC GTSCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYR----NINR-- ------KLSAAGMHEALKLAERPERPEF------------VLQNADY------------- --------------------------------------------CRKKGHDS----- > 30== L15228 1 rat 5HT-7 serotonin receptor <>[JBC268,18200-18204'93] ------------------------------------------------------------ ------MPHLLS---GFLEVTASPAPTWDAPPDNVSGCGEQIN--------YGRVEKVVI GSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDL IGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAK MILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIYST AVAFYIPMSVMLFMYYQIY-------KAARKSAAKHKF---------------------- ---------------------------------PGFPRV----QPESVISLNG------- --VVKL----------------------QK---------EVEECAN-------------- ----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFIC GTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTSRSLLQCQYR----NINR-- ------KLSAAGMHEALKLAERPERSEF------------VLQNSDH------------- --------------------------------------------CGKKGHDT----- > 31=p A47425 serotonin receptor 5HT-7 - rat ------------------------------------------------------------ ------MPHLLS---GFLEVTASPAPTWDAPPDNVSGCGEQIN--------YGRVEKVVI GSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDL IGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAK MILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIYST AVAFYIPMSVMLFMYYQIY-------KAARKSAAKHKF---------------------- ---------------------------------PGFPRV----QPESVISLNG------- --VVKL----------------------QK---------EVEECAN-------------- ----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFIC GTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYR----NINR-- ------KLSAAGMHEALKLAERPERSEF------------VLQNSDH------------- --------------------------------------------CGKKGHDT----- > 32== M83181 1 human serotonin receptor <>[JBC267(11),7553-7562'92] ----------MDVLSP-------------------------------------------- ---------------GQGNNTTSPPAPFET-GGNTTGISDVT---------VSYQ--VIT SLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQV L-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAA LISLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---ACTISKDH----------GYTIYST FGAFYIPLLLMLVLYGRIF-------RAARFRIRK------------------------- --------------TVKKVEKTGADTRHGASPAPQPKKS-----------VNGESGSR-- -------NWRLGVESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAG-- PTPCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-C ESSC-HMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC----RQ---- ------------------------------------------------------------ --------------------------------------------------------- > 33=p A35181 serotonin receptor class 1A - rat ----------MDVFSF-------------------------------------------- ---------------GQGNNTTASQEPFGT-GGNVTSISDVT---------FSYQ--VIT SLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQV L-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAA LISLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---ACTISKDH----------GYTIYST FGAFYIPLLLMLVLYGRIF-------RAARFRIRK------------------------- --------------TVRKVEKKGAGTSLGTSSAPPPKKS-----------LNGQPGSG-- -------DWRRCAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPLPSESG-- SNSYAPACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-C ESSC-HMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC----RR---- ------------------------------------------------------------ --------------------------------------------------------- > 34== L06803 1 Lymnaea stagnalis serotonin receptor <>[PNAS90,11-15'93] MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGLSPTGLV------------T SDFN--DSYGLT---GQFINGSHSSRSRDNASANDTSATNMTDDRYWSLTVYSHEHLVLT SVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEI S-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILL MIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GYTIFST VGAFYLPMLVMMIIYIRIW-------LVARSRIRKDKFQMTKARLKTEETTLVASPKTEY SVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS--- -------SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS-- -----------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-V DPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYR----RGHR-- ------------------------------------------------------------ --------------------------------------------------------- > 35=p A47174 serotonin receptor, 5HTlym receptor - great pond snail MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGLSPTGLV------------T SDFN--DSYGLT---GQFINGSHSSRSRDNASANDTSATNMTDDRYWSLTVYSHEHLVLT SVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEI S-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILL MIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GYTIFST VGAFYLPMLVMMIIYIRIW-------LVARSRIRKDKFQMTKARLKTEETTLVASPKTEY SVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS--- -------SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS-- -----------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-V DPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYR----RGHR-- ------------------------------------------------------------ --------------------------------------------------------- > 36== X95604 1 Bombyx mori serotonin receptor <antennae>[InsectBiochem.Mol.Bi -MEGAEGQEELDWEAL-------YLRLP--LQNCSWNSTGWEPNWNV------------T VVPN--TTWW------------QASAPFDTPAALVRAAAK-------------------- AVVLGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVADLLVACLV-MPLGAVYEV V-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWAVTN-IDYIHASTAKRVGM MIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLRCVVSQDV----------GYQIFAT ASSFYVPVLIILILYWRIY-------QTARKRIR-------------------------- -------------------RRRGATARGGVGPPP---------VPAGGALVAGGGSGGIA AAVVAVIGRPLPTISETTTTGFTNVSS----NNTSP---EKQSCANGLEADPPTTGYGAV AAAYYPSLVRRKPKEAADSK------RERKAAKTLAIITGAFVACWLPFFVLAILVPT-C DCE---VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLLCGRRV----RRRR-- ------A---------------PQ------------------------------------ --------------------------------------------------------- > 1== M63632 1 Lampetra japonica rhodopsin <>[BBRC174,1125-1132'91] ----------------------------------------MNG----------------T E--G--DNFYVP----FSNKTGLARSPYEYPQY-------YLAEPWK---------YSAL AAYMFFLILVGFPVNFLTLF---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ 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