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view test-data/mafft_amino_withU.aln @ 18:0a507f4bd19a draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 3216eed8c66b2fff7c571ab27d3f1e6aaddc186f
author bgruening
date Mon, 14 Jul 2025 18:16:36 +0000
parents 1233363389c1
children
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>CALJE_DJ01Gene08198
MDRVKNQNE---------------------DLLSGVVPLMKLLCLTVIGLVLAHPKIQ--
-IVPRATFKLLSKLVFALFLPCLIF--VHLGESVTLNSVLLWWFVPVNVLISTAIG----
-CALGYIVAIICRPPPQFYRFAVIMTGFG-----NTGNLPIAIVGSVCHSSENPFGPDCH
RTGVAYVSFAQWVAVILVYTLVYHMME------------PPMQYYEIVSEENEIQEETVN
NISRPLLHEAEWPG------MVDKETVH--------------------------------
-----------------SKTPFIARV-------FMSISG--------SSQNTFPDL----
-------------------------------------------------DLTED------
----GGAGPSSP-----------------------------KSLRCLAE-----------
------------------------------------------------------------
---------PKVVRRIRIVAEETPIRHILQPPTIASLLALIVGMVPLFRDFVFGTDAPLS
FFTDSLEILAGAVVPSVMLILGGMLAEGPNDSALGTRTMIGITVARLLVLP---------
------LVGIGVVALADKLNFLVEGDQMYRFVLLLQYTTPSAILLGAIASLRVMLSRKLR
HSCSGSTSVQUSSNSICNLLILLHSLADEDVGASQSGELIK------GTDATRHQLFPGK
DAGFAREQRHGFHAAEVFIAPC-SQKEEKMLFEARRLVRWGFHEPHGPRHAAFQPWPDLS
RARKHCLAPEAGVD---SIAKSAHRSHFSAFSPTP
>CALJE_DJ01Gene07324
MHQKRDIDPADLWLPYSFRSSNMISLATVYHVLEATVPLY-------AAMMLAYLSIKWW
KLFTPDQCTGINKFVAKFSVPLLSFHVISTNNPYQMNLKLLFSDSMQKILALLFFAVISK
ACFRGS--------------LDWLITGFSLSTLPNTLIVGIPLLKDL-------YGDEAA
KLLGQIIV----LQSLVWYTLLLFLFEFRVAKAVAA------------------------
------------------------------------------------------------
-----------------NRND---------------NTG-----ELEASGGMQPKP----
---------------------------------------------------EED--EAKT
LSM--------------------------------------RSIKSLLMKSL--------
------------------------------------------------------------
-----------------LILCMVGKKLMINPNTYASLAGFVWALIS----FRWGIELP-L
MIRSCISILSDGGLGMAMFSLGLFTASQSSIIACGTRMMVLSMGLRFIVGPALIAIPSYA
IGMRATLLKVAIVQAA-----LPQG--IVPWVFAKEYGVQPDIL----------------
-----STGVII-------------------------GMIIA-------------------
-------------------VPI--------------------------------------
-----------------ALAYYSILDHN-------
>CALJE_DJ01Gene04286
----------------------MITWHDLYTVLTAVVPLY-------VAMILAYGSVRWW
RIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPYTMNFRFIAADTLQKLIVLSALAAWAR
LSSRGS--------------LDWAITVFSLATLPNTLVMGIPLLIAM-------YGSFSG
SLMVQIVV----LQCIIWYTLLLFLFEYRAARLLIADQF-PDTAASIVSFRVDSDVVSLD
GGRDLLQADAEVGGDGKIHVTVRRSNAS-RRSVS------------MAMTPRPSNLTGAE
IYSLSSSRNPTPRGSNFNHSDFFAMVGGAPPPLRPSNFGPADLYSLHSSRGPTPRPSNFD
DGAAVGSPRFVHYPAPNPEISASAPVTKKPTPTNPAPPSTAAATQQQNRAAHHD---AKE
LHMFVWSSSASPVSEVGGLHVFGGADFAAPDLAGRPDHGGAKEIRMLIPTDLPQNGGTKG
VAIPEGEDYGGGGEDFSFGGGKGLEDLVGRDKENGPEGLSKLGSSSTAELHPKGGGGPSD
GAKQAHPQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVA----FRWHVTMP-K
IVEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFAMAVRFLTGPAVMAAASIA
VGLRGVLLHVAIVQAA-----LPQG--IVPFVFAKEYNVHPAIL----------------
-----STAVIF-------------------------GMLIA-------------------
-------------------LPI--------------------------------------
-----------------TLVYYIILGL--------
>CALJE_DJ01Gene08527
----------------------MISLVIVYHVLEATVPLY-------AAMILAYLSVKWW
KLFTPDQCTGINNFVAKFSVPLLSFHVISPNNPYPINLKLLFSDSVQKILALLVFAVLSR
PCFRGS--------------LDWLITGFSTSTLPNTLIIGIPLLKGL-------YGDEAV
KLLGQIIV----LQSLVWNTLLLFLFEVRAAKAVAA------------------------
------------------------------------------------------------
-----------------NPTD---------------NTG-----ELESSGGIQPKP----
---------------------------------------------------EED--EVKC
L-----------------------------------------------------------
------------------------------------------------------------
------------------------------------LAGFIWALIL----FRWEVELP-L
IISKCISILSDGGLGMAMFSLGLFMASQSSIIASGTWMMVLSMGLRFIIGPALIAIPSYA
IGLRATLLKVAIVQAA-----LPQG--IVPFVFAKEYSVHPDIL----------------
-----STGFKLD-----------------------QGFLLADERAIEKIDAVELRENPDN
EMGRSPESRR----KGAVIVPIISD-----------------------------------
-----AIGADAGGGLFQAVSSAFRRPHC-------
>CALJE_DJ01Gene19453
----------------------MITGKDIYDVLAAIVPLY-------VAMILAYGSVRWW
KIFTPDQCSGINRFVAVFAVPLLSFHFISTNNPYAMNYHFIGADSLQKVVILFALFLWHN
LSKRGN--------------LDWTITLFSLSTLPNTLVMGIPLLRAM-------YGDFSG
SLMVQIVV----LQSVIWYTLMLFLFEYRGAKALISEQFPPDIAGSITSFRVDSDVVSLN
-GREPLQADAEIRQDGKLHVVVRRSTSSAARSMSSSYNKSHGLNSITSMTPRASNLTGVE
IYSLQSSREPTPRASSFNQTDFYAMF---------------------SSKVTSPRP----
---------------------------------DPSKP-----------ALHQDIPAPKG
LH--APSGNASPIRKAG-----TNGDLEIED--------GCKSQEGKFP-------ASPF
VAQKKGTDTGGVA-----------------------------------------------
GLVENNHRMPPASVMTRLILIMVWRKLIRNPNTYSSLLGLVWSLVS----FRWNIEMP-T
IIKGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVAAFSMAVRFLTGPAVIAATSIA
IGVRGVLLHVAIVQAA-----LPQG--IVPFVFAKEYNCHPDIL----------------
-----STAVIF-------------------------GMLIA-------------------
-------------------LPI--------------------------------------
-----------------TILYYVLLGV--------
>CALJE_DJ01Gene20884
----------------------MIGWEDVCKVVASMVPLY-------VALGLGYGSVRWW
HVFTPDQCDAVNRLVFSFTLPFYAFEFAIHADPFSMNCRLIAADIIGKLIVILVLSLWAK
-CREGSH------------RCSWFITAFSLSTLNNSLVLGLPLLTSL-------YGPSVR
GLVVQTTV----MQAIIWLTLLLFMLEIKKAKGILLEE----------------------
------------------------------------------------------------
----------------------------------------------------SPMK----
---------------------------------------------------EER------
---------SWP------------------------------------------------
----------------SFW-----------------------------------------
-----------------CLMRMVWLKLALNPNFYASILGITWAFIA----NRWQLEMP-S
IMEGSVLVISRAGTGMAMFCIGLFMALQKKMLACGARLTALALVLRFVVGPATMAISAFA
VGLHGDVLRLAIIQAA-----LPQS--VTSFIFAREYGLHADVL----------------
-----STAVIL-------------------------GLLVC-------------------
-------------------LPV--------------------------------------
-----------------LVAYNVLLGFVT------