Mercurial > repos > rnateam > mafft
view test-data/mafft_custom_original.clustal.aln @ 16:8e649f27aa0d draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 3d98df472498e1273369d23822d10db14f337443
| author | bgruening |
|---|---|
| date | Thu, 22 Aug 2024 19:20:24 +0000 |
| parents | bf28a8cff401 |
| children |
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CLUSTAL format alignment by MAFFT G-INS-i (v7.520) 1== MN---------------------------------------------------------- 2== MN---------------------------------------------------------- 3== MN---------------------------------------------------------- 4=p MN---------------------------------------------------------- 5=p MN---------------------------------------------------------- 6== MK---------------------------------------------------------- 7== MR---------------------------------------------------------- 8=opsin, ------------------------------------------------------------ 9== MA------QQWS-LQRLAGRHPQDS--------------------------YED------ 10== MA------QQWS-LQRLAGRHPQDS--------------------------YED------ 11== MT------EAWNVAVFAARRSRDD----------------------------DD------ 12== MA-------AWE-AAFAARRRHEE----------------------------ED------ 13== MS---------------------------------------------------------- 14== MESGNVS----------------------------------------------------- 15== MEYHNVS----------------------------------------------------- 16== ME---------------------------------------------------------- 17== MD---------------------------------------------------------- 18== MT---------------------------------------------------------- 19== MA---------------------------------------------------------- 20== MESF-------------------------------------------------------- 21== MESF-------------------------------------------------------- 22== MDSF-------------------------------------------------------- 23== MERSHLP---------------------------------------------------ET 24== MERSLLP---------------------------------------------------EP 25== MI---------------------------------------------------------- 26== M----------------------------------------------------------- 27== MV---------------------------------------------------------- 28== MG---------------------------------------------------------- 29== MMDVN-----------SSGRPDLYGHLRSFLLPEVGRGLPDLSPDG------------GA 30== M----------------------------------------------------------- 31=p M----------------------------------------------------------- 32== MDVLS------------------------------------------------------- 33=p MDVFS------------------------------------------------------- 34== MANFTFGDLALD-VARMGGLASTPSGLRS-----TGLTTPGLSPTGLVTSDFNDSYGLTG 35=p MANFTFGDLALD-VARMGGLASTPSGLRS-----TGLTTPGLSPTGLVTSDFNDSYGLTG 36== ME---------------------------------------------------------- 1== ----GTEG--DNFY------------VPFSNKTG----------------------LARS 2== ----GTEG--PNFY------------VPFSNITG----------------------VVRS 3== ----GTEG--INFY------------VPMSNKTG----------------------VVRS 4=p ----GTEG--KNFY------------VPMSNRTG----------------------LVRS 5=p ----GTEG--NNFY------------VPLSNRTG----------------------LVRS 6== ----QVPEFHEDFY------IPIP--LDINNLSA------------------------YS 7== ----KMSE--EEFY------------L-FKNISS----------------------V--G 8=opsin, ------------------------------------------------------------ 9== ----STQS--SIFT------------YTNSNSTR-------------------------G 10== ----STQS--SIFT------------YTNSNSTR-------------------------G 11== ----TTRG--SVFT------------YTNTNNTR-------------------------G 12== ----TTRD--SVFT------------YTNSNNTR-------------------------G 13== ----SNSS------------------QAPPNGTP-------------------------G 14== SSLFGNVS--TALR-------------PEARLSA---E------TRLLGWNVPPEELRHI 15== SVL-GNVS--SVLR-------------PDARLSA---E------SRLLGWNVPPDELRHI 16== -PLCNASE--PPLR-------------PEAR-SSGNGD------LQFLGWNVPPDQIQYI 17== -ALCNASE--PPLR-------------PEARMSSGSDE------LQFLGWNVPPDQIQYI 18== ----NATG--PQMAY-----------YGAASMDFGYPE------GVSIVDFVRPEIKPYV 19== ----NVTG--PQMAF-----------YGSGAATFGYPE------GMTVADFVPDRVKHMV 20== AVAAAQLG--PHFA----------------PLS-----------NGSVVDKVTPDMAHLI 21== AVAAAQLG--PHFA----------------PLS-----------NGSVVDKVTPDMAHLI 22== AAVATQLG--PQFA----------------APS-----------NGSVVDKVTPDMAHLI 23== PFDLAHSG--PRFQ----------------AQSSG---------NGSVLDNVLPDMAHLV 24== PLAMALLG--PRFE----------------AQTGG---------NRSVLDNVLPDMAPLV 25== ----AVSG--PSYE----------------AFSYGGQARFN---NQTVVDKVPPDMLHLI 26== -----ANQ--LSYS----------------SLGWPYQP------NASVVDTMPKEMLYMI 27== ----ESTT--------------------LVNQTWWY--------NPTVD----------I 28== ----RDLR---------------------DNETWWY--------NPSIV----------V 29== DPVAGSWA--PHLL------------S---EVTASPAPTWDAPPDNASG----------- 30== ----------PHLL------------SGFLEVTASPAPTWDAPPDNVSG----------- 31=p ----------PHLL------------SGFLEVTASPAPTWDAPPDNVSG----------- 32== --------------------------PGQGNNTTSPPAPFETGGNTTGI----------- 33=p --------------------------FGQGNNTTASQEPFGTGGNVTSI----------- 34== QFINGSHS--SRSRD-----------NASANDT-----------SATNM----------T 35=p QFINGSHS--SRSRD-----------NASANDT-----------SATNM----------T 36== ----GAEG--QEELDWEALYLRLPLQNCSWNSTGWEPN-----WNVTVV----------P 1== PYEYPQY------YLAEPWKYSALAAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYIL 2== PFEQPQY------YLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYIL 3== PFEYPQY------YLAEPWKYRLVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYIL 4=p PFEYPQY------YLAEPWQFKILALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFIL 5=p PFEYPQY------YLAEPWQFKLLAVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFIL 6== PFLVPQD------HLGNQGIFMAMSVFMFFIFIGGASINILTILCTIQFKKLRSHLNYIL 7== PWDGPQY------HIAPVWAFYLQAAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYIL 8=opsin, ------------------------------------------------------------ 9== PFEGPNY------HIAPRWVYHLTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWIL 10== PFEGPNY------HIAPRWVYHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWIL 11== PFEGPNY------HIAPRWVYNLVSFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWIL 12== PFEGPNY------HIAPRWVYNLTSVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWIL 13== PFDGPQWP-----YQAPQSTYVGVAVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYIL 14== PEHWLTY------PEPPESMNYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILV 15== PEHWLIY------PEPPESMNYLLGTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILV 16== PEHWLTQ------LEPPASMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFV 17== PEHWLTQ------LEPPASMHYMLGVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFV 18== HQHWYNY------PPVNPMWHYLLGVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILV 19== LDHWYNY------PPVNPMWHYLLGVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLI 20== SPYWNQF------PAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLV 21== SPYWNQF------PAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLV 22== SPYWDQF------PAMDPIWAKILTAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLV 23== NPYWSRF------APMDPMMSKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLV 24== NPHWSRF------APMDPTMSKILGLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLV 25== DANWYQY------PPLNPMWHGILGFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFV 26== HEHWYAF------PPMNPLWYSILGVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLV 27== HPHWAKF------DPIPDAVYYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFI 28== HPHWREF------DQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFI 29== ---------CGEQINYGRVEKVVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLI 30== ---------CGEQINYGRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLI 31=p ---------CGEQINYGRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLI 32== -------------SDVTVSYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLI 33=p -------------SDVTFSYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLI 34== DDRYWSL------TVYSHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLI 35=p DDRYWSL------TVYSHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLI 36== NTTWWQASAPFD-TPAALVRAAAKAVVLGLLILATVVGNVFVIAAILLERHLRSAANNLI 1== LNLAMANLFMVLFG-FTVTMYTSMN-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLA 2== LNLAVADLFMVFGG-FTTTLYTSLH-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLA 3== VNLAVADLFMACFG-FTVTFYTAWN-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLA 4=p VNLAVAGTIMVCFG-FTVTFYTAIN-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLA 5=p VNLAVAGAIMVCFG-FTVTFYTAIN-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLA 6== VNLSIANLFVAIFG-SPLSFYSFFN-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVA 7== VNVSFGGFLLCIFS-VFPVFVASCN-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLA 8=opsin, ------DLAETVIA-STISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIIS 9== VNLAVADLAETVIA-STISVVNQVY-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIIS 10== VNLAVADLAETVIA-STISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIIS 11== VNLAFVDLVETLVA-STISVFNQIF-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIIS 12== VNLAVADLGETVIA-STISVINQIS-GYFI--LGHPMCVVEGYTVSACGITALWSLAIIS 13== VNLAVADLLVTLCG-SSVSLSNNIN-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILA 14== INLAFCDFMMM-VK-TPIFIYNSFH-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIA 15== INLAFCDFMMM-IK-TPIFIYNSFH-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIA 16== LNLAVFDLIMC-LK-APIF--NSFH-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIG 17== LNLAVFDLIMC-LK-APIFIYNSFH-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIG 18== VNLALSDLIMLTTN-VPFFTYNCFSGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMIS 19== VNLALSDLIMLTTN-FPPFCYNCFSGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMIS 20== INLAISDFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMIS 21== INLAISDFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMIS 22== INLAISDFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMIS 23== LNLAFSDFCMMASQ-SPVMIINFYY-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIA 24== LNLAFSDFCMMASQ-SPVMIINFYY-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIA 25== INLAISNFLMMFCM-SPPMVINCYY-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIA 26== VNLAFSDFCMMAFM-MPTMTSNCFA-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMIT 27== INLAMSDLSFSAINGFPLKTISAFM-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMIS 28== INLAFSDFTFSLVNGFPLMTISCFL-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMIS 29== VSLALADLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVIS 30== VSLALADLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVIS 31=p VSLALADLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVIS 32== GSLAVTDLMVSVLV-LPMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIA 33=p GSLAVTDLMVSVLV-LPMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIA 34== LSLAVADLMVAVLV-MPLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIA 35=p LSLAVADLMVAVLV-MPLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIA 36== LSLAVADLLVACLV-MPLGAVYEVV-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIA . : : * : : 1== IERYIVICKPMGNF-RFGNTHAIMGVAFTWIMALAC-AAPPLVG-WS-----RYIPEGMQ 2== IERYVVVCKPMSNF-RFGENHAIMGVAFTWVMALAC-AAPPLVG-WS-----RYIPEGMQ 3== IERYIVVCKPMGNF-RFSATHAMMGIAFTWVMAFSC-AAPPLFG-WS-----RYMPEGMQ 4=p IERYIVVCKPMGSF-KFSSSHAFAGIAFTWVMALAC-AAPPLFG-WS-----RYIPEGMQ 5=p IERYIVVCKPMGSF-KFSSTHASAGIAFTWVMAMAC-AAPPLVG-WS-----RYIPEGIQ 6== FERWLVICKPLGNF-TFKTPHAIAGCILPWISALAA-SLPPLFG-WS-----RYIPEGLQ 7== FERYIVICKPFGNF-RFSSKHALTVVLATWTIGIGV-SIPPFFG-WS-----RFIPEGLQ 8=opsin, WERWLVVCKPFGNV-RFDAKLAIVGIAFSWIWAAVW-TAPPIFG-WS-----RYWPHGLK 9== WERWMVVCKPFGNV-RFDAKLAIVGIAFSWIWAAVW-TAPPIFG-WS-----RYWPHGLK 10== WERWLVVCKPFGNV-RFDAKLAIVGIAFSWIWSAVW-TAPPIFG-WS-----RYWPHGLK 11== WERWFVVCKPFGNI-KFDSKLAIIGIVFSWVWAWGW-SAPPIFG-WS-----RYWPHGLK 12== WERWFVVCKPFGNI-KFDGKLAVAGILFSWLWSCAW-TAPPIFG-WS-----RYWPHGLK 13== LERYVVVCKPLGDF-QFQRRHAVSGCAFTWGWALLW-SAPPLLG-WS-----SYVPEGLR 14== YDRFNVITRPMEG--KMTHGKAIAMIIFIYMYATPW-VVACYTETWG-----RFVPEGYL 15== YDRYNVITRPMEG--KMTHGKAIAMIIFIYLYATPW-VVACYTESWG-----RFVPEGYL 16== YDRYNVITKPMNR--NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFWD-----RFVPEGYL 17== YDRYNVITKPMNR--NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFWD-----RFVPEGYL 18== FDRYNIICNGFNGP-KLTTGKAVVFALISWVIAIGC-ALPPFFG-WG-----NYILEGIL 19== FDRYNIICNGFNGP-KLTQGKATFMCGLAWVISVGW-SLPPFFG-WG-----SYTLEGIL 20== LDRYQVIVKGMAGR-PMTIPLALGKM---------------------------YVPEGNL 21== LDRYQVIVKGMAGR-PMTIPLALGKIAYIWFMSSIW-CLAPAFG-WS-----RYVPEGNL 22== LDRYQVIVKGMAGR-PMTIPLALGKIAYIWFMSTIWCCLAPVFG-WS-----RYVPEGNL 23== FDRYNVIVKGINGT-PMTIKTSIMKILFIWMMAVFW-TVMPLIG-WS-----AYVPEGNL 24== FDRYNVIVKGINGT-PMTIKTSIMKIAFIWMMAVFW-TIMPLIG-WS-----SYVPEGNL 25== FDRYNVIVKGLSGK-PLSINGALIRIIAIWLFSLGW-TIAPMFG-WN-----RYVPEGNM 26== LDRYNVIVRGMAAA-PLTHKKATLLLLFVWIWSGGW-TILPFFG-WS-----RYVPEGNL 27== IDRYNVIGRPMAASKKMSHRRAFLMIIFVWMWSIVW-SVGPVFN-WG-----AYVPEGIL 28== IDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLW-AIGPIFG-WG-----AYTLEGVL 29== IDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-WA-----QNVNDDKV 30== IDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-WA-----QNVNDDKV 31=p IDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-WA-----QNVNDDKV 32== LDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTP---EDRSDPDA 33=p LDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTP---EDRSDPDA 34== MDRYWAVTS-IDYIRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGT 35=p MDRYWAVTS-IDYIRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGT 36== LDRYWAVTN-IDYIHASTAKRVGMMIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLR :*: : : . 1== CSCGPDYYTLNPNFNNESYVVYMFVVHFLVPFVIIFFCYGRLLCTVKEAAAAQQESA--- 2== CSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESA--- 3== CSCGPDYYTHNPDYHNESYVLYMFVIHFIIPVVVIFFSYGRLICKVREAAAQQQESA--- 4=p CSCGPDYYTLNPDYNNESYVIYMFVCHFILPVAVIFFTYGRLVCTVKAAAAQQQDSA--- 5=p CSCGPDYYTLNPEYNNESYVLYMFICHFILPVTIIFFTYGRLVCTVKAAAAQQQDSA--- 6== CSCGPDWYTTNNKYNNESYVMFLFCFCFAVPFGTIVFCYGQLLITLKLAAKAQADSA--- 7== CSCGPDWYTVGTKYRSESYTWFLFIFCFIVPLSLICFSYTQLLRALKAVAAQQQESA--- 8=opsin, TSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAIRAVAKQQKESE--- 9== TSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAIRAVAKQQKESE--- 10== TSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAIRAVAKQQKESE--- 11== TSCGPDVFSGSVELGCQSFMLTLMITCCFLPLFIIIVCYLQVWMAIRAVAAQQKESE--- 12== TSCGPDVFSGSSDPGVQSYMVVLMVTCCFFPLAIIILCYLQVWLAIRAVAAQQKESE--- 13== TSCGPNWYTGGS--NNNSYILSLFVTCFVLPLSLILFSYTNLLLTLRAAAAQQKEAD--- 14== TSCTFDYLTDN--FDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKKM 15== TSCTFDYLTDN--FDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKKM 16== TSCSFDYLSDN--FDTRLFVGTIFFFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKKM 17== TSCSFDYLSDN--FDTRLFVGTIFLFSFVVPTLMILYYYSQIVGHVFNHEKALREQAKKM 18== DSCSYDYLTQD--FNTFSYNIFIFVFDYFLPAAIIVFSYVFIVKAIFAHEAAMRAQAKKM 19== DSCSYDYFTRD--MNTITYNICIFIFDFFLPASVIVFSYVFIVKAIFAHEAAMRAQAKKM 20== TSCGIDYLERD--WNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKM 21== TSCGIDYLERD--WNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKM 22== TSCGIDYLERD--WNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKM 23== TACSIDYMTRM--WNPRSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKKM 24== TACSIDYMTRQ--WNPRSYLITYSLFVYYTPLFMICYSYWFIIATVAAHEKAMRDQAKKM 25== TACGTDYFNRG--LLSASYLVCYGIWVYFVPLFLIIYSYWFIIQAVAAHEKNMREQAKKM 26== TSCTVDYLTKD--WSSASYVVIYGLAVYFLPLITMIYCYFFIVHAVAEHEKQLREQAKKM 27== TSCSFDYLSTD--PSTRSFILCMYFCGFMLPIIIIAFCYFNIVMSVSNHEKEMAAMAKRL 28== CNCSFDYISRD--STTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRL 29== CLISQDF----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKFPG--- 30== CLISQDF----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKFPG--- 31=p CLISQDF----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKFPG--- 32== CTISKDH----------GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVKKVEKT 33=p CTISKDH----------GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVRKVEKK 34== CIISQDK----------GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKA 35=p CIISQDK----------GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKA 36== CVVSQDV----------GYQIFATASSFYVPVLIILILYWRIYQTARKRIRRRRGATARG : * : * : 1== ------------------------------------------------------------ 2== ------------------------------------------------------------ 3== ------------------------------------------------------------ 4=p ------------------------------------------------------------ 5=p ------------------------------------------------------------ 6== ------------------------------------------------------------ 7== ------------------------------------------------------------ 8=opsin, ------------------------------------------------------------ 9== ------------------------------------------------------------ 10== ------------------------------------------------------------ 11== ------------------------------------------------------------ 12== ------------------------------------------------------------ 13== ------------------------------------------------------------ 14== NVE------------------SLRS----------------------------------- 15== NVD------------------SLRS----------------------------------- 16== NVE------------------SLRS----------------------------------- 17== NVE------------------SLRS----------------------------------- 18== NVS------------------TLRS----------------------------------- 19== NVT------------------NLRS----------------------------------- 20== NVK------------------SLRS----------------------------------- 21== NVK------------------SLRS----------------------------------- 22== NVK------------------SLRS----------------------------------- 23== NVK------------------SLRS----------------------------------- 24== NVK------------------SLRS----------------------------------- 25== NVA------------------SLRS----------------------------------- 26== NVA------------------SLRA----------------------------------- 27== NAK------------------ELRK----------------------------------- 28== NAK------------------ELRK----------------------------------- 29== -----------FPRVEPDSVIALNG----------------------------------- 30== -----------FPRVQPESVISLNG----------------------------------- 31=p -----------FPRVQPESVISLNG----------------------------------- 32== GADTRHGASPAPQPKK-----SVNGE--SGSRNWRLGVESKAGGALC------------- 33=p GAGTSLGTSSAPPPKK-----SLNGQ--PGSGDWRRCAENRAVGTPC------------- 34== RLKTEETTLVASPKTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKK 35=p RLKTEETTLVASPKTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKK 36== GVG---------------------------------------------PPP--------- 1== ------------------------------------------------------------ 2== ------------------------------------------------------------ 3== ------------------------------------------------------------ 4=p ------------------------------------------------------------ 5=p ------------------------------------------------------------ 6== ------------------------------------------------------------ 7== ------------------------------------------------------------ 8=opsin, ------------------------------------------------------------ 9== ------------------------------------------------------------ 10== ------------------------------------------------------------ 11== ------------------------------------------------------------ 12== ------------------------------------------------------------ 13== ------------------------------------------------------------ 14== ------------------------------------------------------------ 15== ------------------------------------------------------------ 16== ------------------------------------------------------------ 17== ------------------------------------------------------------ 18== ------------------------------------------------------------ 19== ------------------------------------------------------------ 20== ------------------------------------------------------------ 21== ------------------------------------------------------------ 22== ------------------------------------------------------------ 23== ------------------------------------------------------------ 24== ------------------------------------------------------------ 25== ------------------------------------------------------------ 26== ------------------------------------------------------------ 27== ------------------------------------------------------------ 28== ------------------------------------------------------------ 29== ---------------------------IVKLQKE-------------------VEECAN- 30== ---------------------------VVKLQKE-------------------VEECAN- 31=p ---------------------------VVKLQKE-------------------VEECAN- 32== -----------------------------------ANGAVRQGDDGAALEVIEVHRVGNS 33=p -----------------------------------TNGAVRQGDDEATLEVIEVHRVGNS 34== LPENANGVNSNSSS----------SERLKQIQIETAEAFANGCAEEASIAML-ERQCNNG 35=p LPENANGVNSNSSS----------SERLKQIQIETAEAFANGCAEEASIAML-ERQCNNG 36== VPAGGALVAGGGSGGIAAAVVAVIGRPLPTISETTTTGFTNVSSNNTSPE---KQSCANG 1== -----------------------------------STQKAEKEVTRMVVLMVIGFLVCWV 2== -----------------------------------TTQKAEKEVTRMVIIMVIFFLICWL 3== -----------------------------------TTQKAEKEVTRMVILMVLGFMLAWT 4=p -----------------------------------STQKAEREVTKMVILMVFGFLIAWT 5=p -----------------------------------STQKAEREVTKMVILMVLGFLVAWT 6== -----------------------------------STQKAEREVTKMVVVMVLGFLVCWA 7== -----------------------------------TTQKAEREVSRMVVVMVGSFCVCYV 8=opsin, -----------------------------------STQKAEKEVTRMVVVMVLAFC---- 9== -----------------------------------STQKAEKEVTRMVVVMVLAFCFCWG 10== -----------------------------------STQKAEKEVTRMVVVMIFAYCVCWG 11== -----------------------------------STQKAEREVSRMVVVMIVAFCICWG 12== -----------------------------------STQKAEKEVSRMVVVMIVAYCFCWG 13== -----------------------------------TTQRAEREVTRMVIVMVMAFLLCWL 14== -------------------------------NVDKNKETAEIRIAKAAITICFLFFCSWT 15== -------------------------------NVDKSKEAAEIRIAKAAITICFLFFASWT 16== -------------------------------NVDKSKETAEIRIAKAAITICFLFFVSWT 17== -------------------------------NVDKSKETAEIRIAKAAITICFLFFVSWT 18== --------------------------------NEADAQRAEIRIAKTALVNVSLWFICWT 19== --------------------------------NEAETQRAEIRIAKTALVNVSLWFICWT 20== --------------------------------SEDAEKSAEGKLAKVALVTITLWFMAWT 21== --------------------------------SEDAEKSAEGKLAKVALVTITLWFMAWT 22== --------------------------------SEDADKSAEGKLAKVALVTISLWFMAWT 23== --------------------------------SEDCDKSAEGKLAKVALTTISLWFMAWT 24== --------------------------------SEDCDKSAENKLAKVALTTISLWFMAWT 25== --------------------------------SENQNTSAECKLAKVALMTISLWFMAWT 26== -------------------------------NADQQKQSAECRLAKVAMMTVGLWFMAWT 27== ---------------------------------AQAGASAEMKLAKISMVIITQFMLSWS 28== ---------------------------------AQAGANAEMRLAKISIVIVSQFLLSWS 29== -----------------LSRLLKH------ERKNISIFKREQKAATTLGIIVGAFTVCWL 30== -----------------LSRLLKH------ERKNISIFKREQKAATTLGIIVGAFTVCWL 31=p -----------------LSRLLKH------ERKNISIFKREQKAATTLGIIVGAFTVCWL 32== KEHLPLPSEAG--PTPCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWL 33=p KEHLPLPSESG--SNSYAPACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWL 34== KK-------------------ISSNDTPYSRTREKLELKRERKAARTLAIITGAFLICWL 35=p KK-------------------ISSNDTPYSRTREKLELKRERKAARTLAIITGAFLICWL 36== LEADPPTTGYGAVAAAYYPSLVRR------KPKEAADSKRERKAAKTLAIITGAFVACWL * . : 1== PYASVAFYIFT---HQGSD-FGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCMITTLC 2== PYASVAMYIFT---HQGSN-FGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLC 3== PYAVVAFWIFT---NKGAD-FTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTIC 4=p PYATVAAWIFF---NKGAD-FSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIF 5=p PYATVAAWIFF---NKGAA-FSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLF 6== PYASFSLWIVS---HRGEE-FDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCMMKMVC 7== PYAAFAMYMVN---NRNHG-LDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACIMKMVC 8=opsin, ------------------------------------------------------------ 9== PYAFFACFAAA---NPGYP-FHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCILQLF- 10== PYTFFACFAAA---NPGYA-FHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLF- 11== PYASFVSFAAA---NPGYA-FHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCIMQLF- 12== PYTFFACFAAA---NPGYA-FHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCILQLF- 13== PYSTFALVVAT---HKGII-IQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCLLEMLC 14== PYGVMSLIGAF---GDKTL-LTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCP 15== PYGVMSLIGAF---GDKTL-LTPGATMIPACTCKMVACIDPFVYAISHPRYRMELQKRCP 16== PYGVMSLIGAF---GDKSL-LTQGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCP 17== PYGVMSLIGAF---GDKSL-LTPGATMIPACTCKLVACIEPFVYAISHPRYRMELQKRCP 18== PYALISLKGVM---GDTSG-ITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAITQHLP 19== PYAAITIQGLL---GNAEG-ITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAITQHLP 20== PYLVINCMGLF---KF-EG-LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCP 21== PYLVINCMGLF---KF-EG-LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCP 22== PYLVINCMGLF---KF-EG-LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCP 23== PYLVICYFGLF---KI-DG-LTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCP 24== PYLIICYFGLF---KI-DG-LTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVLKEKCP 25== PYLVINFSGIF---NL-VK-ISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAALFAKFP 26== PYLIISWAGVF---SSGTR-LTPLATIWGSVFAKANSCYNPIVYGISHPRYKAALYQRFP 27== PYAIIALLAQF---GPAEW-VTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFP 28== PYAVVALLAQF---GPLEW-VTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFP 29== PFFLLSTARPFICGTSCSC-IPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQ 30== PFFLLSTARPFICGTSCSC-IPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTSRSLLQ 31=p PFFLLSTARPFICGTSCSC-IPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQ 32== PFFIVALVLPF---CESSCHMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIK 33=p PFFIVALVLPF---CESSCHMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIK 34== PFFIIALIGPF---VDPEG-IPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILF 35=p PFFIIALIGPF---VDPEG-IPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILF 36== PFFVLAILVPT---CDCE--VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLLC 1== C-GKNPLGDDE-SGA-STSKTEVSSVS-TSPV---------------------------- 2== C-GKNPLGDDE-ASA-TASKTE------TSQV---------------------------- 3== C-GKNPFGDEDVSSTVSQSKTEVSSVS-SSQV---------------------------- 4=p C-GKNPLGDDE-SSTVSTSKTEVSS------V---------------------------- 5=p C-GKNPLGDEE-SSTVSTSKTEVSS------V---------------------------- 6== --GKN-IEEDE-AST-SSQVTQVSSVA-PEK----------------------------- 7== --GKA-MTDES-DTC-SSQKTEVSTVS-STQV---------------------------- 8=opsin, ------------------------------------------------------------ 9== --GKK-VDDGS-ELS-SASKTEVSSV---SSV---------------------------- 10== --GKK-VDDGS-ELS-SASKTEVSSV---SSV---------------------------- 11== --GKK-VDDGS-EAS-TTSRTEVSSVS-NSSV---------------------------- 12== --GKK-VDDGS-EVS--TSRTEVSSVS-NSSV---------------------------- 13== C-GYQPQRTGKASPGTPGPHADVTAAGLRNKV---------------------------- 14== WLALNEKAPES-SAV-ASTST---TQE-PQQT---------------------------- 15== WLAISEKAPES-RAA-ISTST---TQE-QQQT---------------------------- 16== WLGVNEKSGEI-SSA-QSTTT---QEQ--QQT---------------------------- 17== WLGVNEKSGEA-SSA-QSTTT---QEQ-TQQT---------------------------- 18== WFCVHETETKS-NDD-SQSNS---TVA-Q------------------------------- 19== WFCVHEKDPND-VEE-NQSSN---TQT-Q------------------------------- 20== CCVFGKVDDGK-SSD-AQSQA-TASEA-E------------------------------- 21== CCVFGKVDDGK-SSD-AQSQA-TASEA-E------------------------------- 22== CCVFGKVDDGK-SSE-AQSQA-TTSEA-E------------------------------- 23== MCVFGNTDEPK-PDA-PASDTETTSEA-D------------------------------- 24== MCVCGTTDEPK-PDA-PPSDTETTSEA-E------------------------------- 25== SLACA-AEPSS-DAV-STTSG-TTTVT-DNEK---------------------------- 26== SLACGSGESGS-DVK-SEASA-TTTME-EKPK---------------------------- 27== WLLTCCQFDEK-ECE-DANDAEEEVVA-SER---GGESRDAAQMKEMMAMMQKMQAQQAA 28== WVLTCCQFDDK-ETE-DDKDAETEIPA-GESSD-AAPSADAAQMKEMMAMMQKMQQQQAA 29== --CQYRNINRKLSAA-GMHEALKLAER-PERPEFVLQNADYCRKKG-------------- 30== --CQYRNINRKLSAA-GMHEALKLAER-PERSEFVLQNSDHCGKKG-------------- 31=p --CQYRNINRKLSAA-GMHEALKLAER-PERSEFVLQNSDHCGKKG-------------- 32== --CKFCR----------------------------------------------------- 33=p --CKFCR----------------------------------------------------- 34== --GKYRR----------------------------------------------------- 35=p --GKYRR----------------------------------------------------- 36== --GRRVR-RRR------------------------------------------------- 1== ------------------------------------------------------------ 2== ------------------------------------------------------------ 3== ------------------------------------------------------------ 4=p ------------------------------------------------------------ 5=p ------------------------------------------------------------ 6== ------------------------------------------------------------ 7== ------------------------------------------------------------ 8=opsin, ------------------------------------------------------------ 9== ------------------------------------------------------------ 10== ------------------------------------------------------------ 11== ------------------------------------------------------------ 12== ------------------------------------------------------------ 13== ---------------------------------------MP------------------- 14== ------------------------------------------------------------ 15== ------------------------------------------------------------ 16== ------------------------------------------------------------ 17== ------------------------------------------------------------ 18== ------------------------------------------------------------ 19== ------------------------------------------------------------ 20== ------------------------------------------------------------ 21== ------------------------------------------------------------ 22== ------------------------------------------------------------ 23== ------------------------------------------------------------ 24== ------------------------------------------------------------ 25== ------------------------------------------------------------ 26== ------------------------------------------------------------ 27== YQP---PPPPQGYPPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGA 28== YPPQGYAPPPQGYPPQGYPPQGY--PPQGYPPQGYPP---PPQGAPPQGAPP------AA 29== ------------------------------------------------------------ 30== ------------------------------------------------------------ 31=p ------------------------------------------------------------ 32== ------------------------------------------------------------ 33=p ------------------------------------------------------------ 34== ------------------------------------------------------------ 35=p ------------------------------------------------------------ 36== ------------------------------------------------------------ 1== ---------SPA 2== ---------APA 3== ---------SPA 4=p ---------SPA 5=p ---------SPA 6== ------------ 7== ---------GPN 8=opsin, ------------ 9== ---------SPA 10== ---------SPA 11== ---------APA 12== ---------SPA 13== --------AHPV 14== ---------TAA 15== ---------TAA 16== ---------TAA 17== ---------SAA 18== ---------DKA 19== ---------EKS 20== ---------SKA 21== ---------SKA 22== ---------SKA 23== ---------SKA 24== ---------SKD 25== ---------SNA 26== --------IPEA 27== PPQGVDNQAYQA 28== PPQGVDNQAYQA 29== ---------HDS 30== ---------HDT 31=p ---------HDT 32== -----------Q 33=p -----------R 34== ---------GHR 35=p ---------GHR 36== ---------APQ