Mercurial > repos > rnateam > mirdeep2_mapper

comparison test-data/cel_cluster.fa @ 0:af18bb0baa92 draft

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Imported from capsule None
author rnateam
date Tue, 27 Jan 2015 09:06:06 -0500
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-1:000000000000 0:af18bb0baa92
1 >chrII:11534525-11540624
2 tccaaaatattagaggccccacgaaaaggggagcagaacgaaaaggggat
3 ctgcaaaaaggggatctgcgaaaaggggagatacgaaaaggggagatacg
4 aaaaggggagcaacgaaaaggggatctggcactgtgccaaacgctatttt
5 tctcaaagaaaacaatacaacgatgctccgatgttacgcgtcgcgtgttg
6 ttaagcgtatcttctagaagaaaatttcaaaaatcaacgtgcgttgcgtg
7 agaaaaattgcgttttgtgcgtttggcacagtgccagctccccttttcgt
8 tgctccccttttcgtatctccccttttcgtatctccccttttcgcagatc
9 ccctttttgcagatccccttttcgttctgctcccctcgtggggcctcaaa
10 taatattgtcaatggagcgcagttgcgcacaccgaaatacgcacgaaatt
11 tgaaattggcaggcctagaaagtctggatttaaaatatttatgcatatta
12 acctgagtttcggcatgtttagataaatttagattaaaatttattaaata
13 aaaatatttaaaatttattaaattcaacattatctttaattttacagaaa
14 taaaaaccaaaaaaccaacgaagtgtaacttttcgacaataaatatttat
15 aaattattcaattaattggaaatctatttatcacatctcatcgtgaacaa
16 gcacatggctaaacaatgcctcgactttatccacccatcctggatttttc
17 ctgttgaaaatcttcaaatccttcatagtctgctcaattgccttaacagc
18 cttttcccttttcacatccttcgtcaattcctcaaccatcgcctctacaa
19 gttgtgatcgtgaggccccttcaacgaatttcttgtccaatacatctctg
20 agctgaaaaataagtccctttattcatgtgcaccacctgccactcattca
21 ttttagatcctaatcctgtatttctctctctctctcactaatcgtcccgt
22 catatctgacccactataatgaggggaccaccactttgccccagatttcg
23 taatgagccaacatacactaggccctgttctagcacccccattgtgcatg
24 ggagacacatcgtctgttggttcgggtcagctgagatgacgtggcagatg
25 acgtcatgtttgttctctagcagatccctatcgtaaaataccgttctttg
26 ttcgtttatgagcacttcttgggaaacaagaagaatattagagaatattg
27 gattttaggaaatttcttgaccctaataatatgtatctcatggggctaat
28 tacgaaagatttagagctcactaaagcagatgtggataagctggaactat
29 agtcaattctcacgagatattattattagcttactcgttgaatttgatgc
30 cgtgttaggtagaagccgagaacacgatgaaccttggaagttatgtagtc
31 gagttttctggaagaaaaagtatatatagtttgataaaaagttacgtcat
32 aagttattggtcccgagtgtgtacactagaaacttgcgcaatcagttggt
33 caggtggtctaggacctttacatgtaatataattcattggtttgttgctc
34 tagatctcaaagaatatggttttcctgctgagaaacaaaatttttttttc
35 aaatgttcgcgatattatacgatttttttgcgctgaaaaatacggtatcc
36 ggactcgacacgacagtttttcaataaattcggaaaggtacatatgcgcc
37 tttgaagagtactgtaattttaaacatttgttgatgcagtaaatattctc
38 acggatttttagaggtttttttttgaatatttatacagttatattagagt
39 taaaaaaataaatctatttttatcgaaatttatgaaaaatctactcccca
40 gaaacaaagtttgaatttacttaaaatgtatgtgcgcctttttaaattca
41 acaaaaatttatcaaattttgtctttttaatcacttttacttttttttcg
42 aaaaaaaaaaaaactttaaaaacaccgaaaattaaaatttttaattaccg
43 taatcctttaaaggcgcacacctctttttcgcaatcataaaaatttacag
44 gcacagaatttcctactgtaacgtgttttctcgatagaaacgtttctcca
45 aatcgaaatttttattagcaatcatcaattcgtcatgtttctgtgctgga
46 gcacattgttatgcagtgctcatgaatattcacagttgaaaatcgaattt
47 ttttttcttatttttattaacttctctcctcactcaagtgcaatctcatt
48 tcggcggaacgatgaaagcggactcgtttgaaacggattacactgctggc
49 tggctccatcttttttatttctggtttttttcccgacacgggaggtcatc
50 cgtccacgtcttcaatcttattcgcttctccttctatctatctctcttcc
51 aaaaaaatggaacagattgtccgccttctactttccgcatgcgcctattc
52 tagacatcgagaagaagcgagagaatccgaaaaactccgccgtccggcgc
53 ctagcgttcatcccgtcgcatccaatttccttcacccctgtctccagtct
54 ctaatctgtgtttcccagaccttctccttcttcttctcccctctttcttc
55 cctttcttttctacgattcctagacctgcccggttgaccatcgggcccac
56 catttatcgagcgcgtccgtctgttcgttgctgtgagcgcgcgcgcgcga
57 gcgcacactgcacaccatttgaccgcaacgagccgagagagtgtgtgaaa
58 tgaagagacgccgagtggacacgttgctctacaccaaacgcgctacacca
59 aatgggcggagacccaatggtgcaccaagtcagcagtataaaaggaatgg
60 aaatggtccattcagtcatcagttgtttttttattttctcttttctccca
61 tcactttctcccttcttcccctctcctaatttccattcccaactattatt
62 ctcggatcagatcgagccattgctggtttcttccacagtggtactttcca
63 ttagaactatcaccgggtggaaactagcagtggctcgatcttttccactt
64 gctccaccgctgtcggggaaccgcgccaattttcgcttcagtgctagacc
65 atccaaagtgtctatcaccgggtgaaaattcgcatgggtccccgacgcgg
66 aaagataaaatatcttaaaatcgattctagaaacccttggaccagtgtgg
67 gtgtccgttgcggtgctacattctctaatctgtatcaccgggtgaacact
68 tgcagtggtcctcgtggtttctctgtgagccaggtcctgttccggttttt
69 tccgtggtgataacgcatccaaaagtctctatcaccgggagaaaaactgg
70 agtaggacctgtgactcattccgatttctggagttttcccctacattcta
71 ccattcagctactgattattgaattcctgatataccgagagcccagctga
72 tttcgtcttggtaataagctcgtcattgagattatcaccgggtgtaaatc
73 agcttggctctggtgtctccgaacctcctgtccgcacctcagtggatgta
74 tgccatgatgataagatatcagaaatcctatcaccgggtgtacatcagct
75 aaggtgcgggtacaggtgcatttgatatcaaggtgagttatttttaagtg
76 ggtcccagagaccttggtggtttttctctgcagtgatagatacttctaac
77 aactcgctatcaccgggtgaaaaatcacctaggtctggagcctcctgctc
78 tttttttgctgtttttaaacttaaacttaaaactaacactttatcaaaat
79 aaagtcttccaaaatcttttttctgatctgccggaagactttccatgaat
80 ttgtccaaaactcgttgcactttatcctcgtcgtaatcatttgacaccat
81 atctttggataactagaataattgaacattggtttaaaaaaattctctca
82 aaaaaaaaatcacaaacctgatgaattttagcctcatctatagcagtatc
83 tgcgagaagaatcgtaagattcattgataattctatatattttccaataa
84 ttttatccgaagctggatgtgaagtttctacagtacctccgtggcataat
85 actacaatggaagcaaaaagagcgacaattaggatcgtcattttagtgga
86 gaatgatgaattgacccggctctttgggggttggaggattcattttcccc
87 ttcaacaggtgctcaaataattaaagagaatagaaccgacgatatatggg
88 tcaaatgtttatacagttgtgctactaaacgtattgttacacgcgttatt
89 aataattagaattagaattatatcgttttgtacggattgagaatcccatt
90 tgggtcgaaaatgttcttgagcttctttgtcaaaagtcgttcttcaggat
91 cttttccgaatgtggagtacggtagcttcagttgaccgattccatgttca
92 gctgaaattgacccgccgtgatcgacaacccattcgtagaggaagggata
93 gagcctggaatttgaaattattaatagaattaaaattttataaaaaagaa
94 aaatctcgaaacttacaatttttcaagttcttcattgtgtttttcagatg
95 taatatttaaatgagtgtttccatctcccaaatgtccataagtgacaatt
96 cttttagccaaagaaccacatcgttccttcatcacattcgtcaattcata
97 ataattttccaatggtaaagaaacatcatgcttatagacatatccatctc
98 tggtaaccgccaatggtgcactttctctcaattgccacatcttcgtagct
99 tctgcagaagatccagcgagcactccgtcgataatcagattttttgagag
100 gcattcatccaaaaatgcgctcattttctccatatcgtgatcttcattgg
101 atcctgatgtttcgacaaggatcgagaatggggttggagcattcagtact
102 gggtgcaatcctagattcgttttcaaacattccatcgtagcatcgtcgag
103 aagttcgaaggaggaaaggatttcagtgaggctggattttgcaagcttca
104 gtacttcgcagcattttttgaaggattcgatgcctgaaaaaaattagaaa
105 ttgaaaaatttgaacccattatataaatattcaacctaccaagcatcgca
106 ctttgtacacttttcggtttaggaaccgcagtcattgtgacgcttgtgat
107 aacacccaactgcccttcacttcccaagaataggtgtggagtgtgcaaag
108 ttgtgttgtccttccgaatgcttgatcccaaatgtagaacagttccatgt
109 tcatcgggaagaaccaccgtgagcccgagaagatgtgcgtgaagacttcc
110 gtatcgaatcaaccgaatccctcctgcacacgtggcaatatttcctccaa
111 tctgacaggatcctttggctccgagatcaaaaggcatcatatatccgagt
112 tttgcaagtttgttgtccaagtcttccagaataaaaccagaatcacactt
113 gagaattcccattgtgtcgtcgaaagagaattgcttgttgattttattca
114 ttgatataacaacttcatcatgtactggaattgatccaccaacgagtcct
115 gtattccctccttgtgggactactgccaatttgttcttggagcaatacgc
116 caatattgcagaaacctcttcggtgctcttcgggtagaggacgacactgc
117 caggacctggaaattaaaacatttaatatttaaagtacctatttaatatt
118 aaataaacctaatcttaaaatacaaatacctttaaattggcctgtccaat
119 ctgtagtatgatttgtaatatcgtccttcttcactgcatcttgcccgaga
120 aaattctcaaatgccattaaatccgactgcatcacttttgcaaatccttc
121 atgtctggcggcaagaactgctgcgtagcttctagttggtcttctgattc
122 gtggcaagattttcagaaacatctgaattcagaaacttttcaaaaaataa
123 cttgaaacttcaaaagaaatagtaggagacaaagctcggctaggtgaccg
124
125 >chrIII:2172325-2172669
126 CAGGCAGTCAGTCAGTCTCTCTCCACTCACATTCAGTCAGTCAGTGACCA
127 TCACCAGGTTGTGTGTGAGCCCCTTCCATTATTCTTCTGAACCCCCCTCC
128 CAACGCGGGAAGACTCGCCGGCAATGACACTGGTTATCTTTTCCATCGTG
129 GAATGCCCCCCATTGATTTTTTCCCCTTTTCGGGGGGAAAAAATTGGAAA
130 CGAGAAAGGTATCGGGTGTCATAGCCGGCGTGATCATCTTCCTCAAGTAT
131 TCCTCTGCTGATTTCGATATTCGGAGGAGCTCGGAGGCTGTTCAGCTGTA
132 AAATTGGTTGATTAAGCTCAAAAATCGGCGTTAACGCGGCTTTCC