Mercurial > repos > rnateam > package_python_2_7_bcbiogff_0_6_2
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bcbiogff_0_6_2 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
author | rnateam |
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date | Thu, 11 Jun 2015 18:43:32 -0400 |
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<?xml version="1.0"?> <tool_dependency> <package name="python" version="2.7"> <repository changeset_revision="44bb4258922f" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <package name="bcbiogff" version="0.6.2"> <install version="1.0"> <actions> <action type="setup_python_environment"> <repository changeset_revision="44bb4258922f" name="package_python_2_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> <package name="python" version="2.7" /> </repository> <package>https://pypi.python.org/packages/source/b/bcbio-gff/bcbio-gff-0.6.2.tar.gz#md5=d5aae8b125cdad4291f15bec20cfb0ef</package> </action> <action type="set_environment"> <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> </action> </actions> </install> <readme> bcbio-gff --------- A python library to read and write Generic Feature Format (`GFF`_). See the `wiki documentation`_ for details on usage. The goal is to integrate this code in `gffutils`_ and `Biopython`_. Installation from `bcbio-gff in pypi`_:: pip install bcbio-gff This code is freely available for use under the `Biopython license <https://github.com/biopython/biopython/blob/master/LICENSE>`_. .. _GFF: http://www.sequenceontology.org/gff3.shtml .. _wiki documentation: http://biopython.org/wiki/GFF_Parsing .. _gffutils: https://github.com/daler/gffutils .. _Biopython: http://biopython.org .. _bcbio-gff in pypi: https://pypi.python.org/pypi/bcbio-gff </readme> </package> </tool_dependency>