Mercurial > repos > rnateam > sortmerna

diff test-data/test4_de_novo.fasta @ 10:10b84b577117 draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/sortmerna commit 7dca92baf6a91f10bced28b883f14d3f4d7630c5
author rnateam
date Sat, 21 Oct 2023 09:07:21 +0000
parents 65c38d020fea
children
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--- a/test-data/test4_de_novo.fasta	Wed Mar 20 03:03:08 2019 -0400
+++ b/test-data/test4_de_novo.fasta	Sat Oct 21 09:07:21 2023 +0000
@@ -1,23 +1,13 @@
 >1p_error_2 reference=AY466476 amplicon=432..713 errors=76%G
 GUGCCAGCAGCCGCGGUAAUACGAAGGGGGCUAGCGUUGUUCGGAGUUACUGGCGUAAAGGCGCGUAGCGGCCUGGAAGUUAGCGUGAAGCCCUGGCUCA
->1p_error_3 reference=JN430627 amplicon=421..712 errors=1%C
-CUGCCAGCAGCCGCGGUAACACGUAAGGGGCGAGCGUUGUUCGGAAUUAUUGGGCGUAAAGGGCACGUAGGCGGCACGGUAAGCCUGGUGUGAAAGACCG
 >1p_error_5 reference=FJ890890 amplicon=455..746 description="Bacteria;Cyanobacteria;Chloroplast
 GUGCCAGCAGCCGCGGUAAGACAGAGGAUGCAAGCGUUAUCCGGAAUGAUUGGGCGUAAAGCGUCUGUAGGUUGUUUAAAAAGUAUUUUGUUAAAGAUUA
->1p_error_6 reference=JN449148 amplicon=487..779 errors=39%C
-GUGCCAGCAGCCGCGGUAAUACGUAAGGGGCGAGCGUUCCUCGGAAUUACUGGGCGUAAAGGGCGUGUAGGUGGUCUUGCAAGUCGAUUGGUAAAAGACC
 >1p_error_7 reference=EF019112 amplicon=467..758 errors=8%U,40%A
 GUGCCAGUAGCCGCGGUAAGACGUAGGGGGCGAGCGUUAAUCGGAAUUAUUGGGCGUAAAGCGUGCGUAGGCGGAUUCGUAAGUCGGGGUUGAAAUAUCC
 >1p_error_8 reference=EF020331 amplicon=491..782 errors=53+G
 GUGCCAGCAGCCGCGGUAAUACGUAGGCAGCAAGCGUUGUUCGGAAUUACUGGGGCGUAAAGAGUGUGUAGGCGGUUUUCUAAGUUUGGUGUGAAAUCUCC
->1p_error_9 reference=FJ879628 amplicon=498..789 errors=18+C
-GUGCCAGCAGCCGCGGUACAUACGUAGGGGGCAAGCGUUAUCCGGAUUUACUGGGUGUAAAGGGAGCGUAGGUGGCAGGGCAAGUCAGAUGUGAAAACCCG
 >1p_error_10 reference=EU134170 amplicon=467..758 description="Bacteria;Chloroflexi;Anaerolineae;Anaerolineales;Anaerolineaceae;uncultured
 GUGCCAGCAGCCGCGGUAAAACGUAGGAGGCGAGCGUUAUCCGGAUUUACUGGGCGUAAAGCGUGCGCAGGCGGUCCGACAGGUCGGGCGUGAAAUCUCC
->1p_error_11 reference=EU490280 amplicon=472..764 errors=63+U
-GUGCCAGCAGCCGCGGUAAAACGUAGGGGGCUAGCGUUACCCGGAUUCACUGGGCGUAAAGCGUGGUGUAGGCGGUCCGGCAAGUCGGAUGUGAAAUCCCA
->1p_error_12 reference=FJ202663 amplicon=453..744 description="Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Rhodospirillaceae;Thalassospira
-GUGCCAGCAGCCGCGGUAAUACGAAGGGAGCAAGCGUUGUUCGGAAUUACUGGGCGUAAAGGGCGUGUAGGCGGAUUAUCAAGUUAGGGGUGAAAUCCCG
 >1p_error_13 reference=DQ522159 amplicon=503..793 errors=7+C
 GUGCCAGCCAGCCGCGGUAAUACAUAGGUUGCAAGCGUUAUCCGGAUUUAUUGGGCGUAAAGCAAGCGCAGGUUGGUUAUCAAGUCUAGUGUGAAAGGCAA
 >1p_error_14 reference=EU773708 amplicon=499..791 errors=58%U
@@ -28,13 +18,9 @@
 AUGCCAGCAGCCGCGGUAACACGUAGGGGGCAAGCGUUGUUCGGAAUUAUUAGGCGUAAAGGGCAGGCAGGCGGACCUGCAAGUUUUCUGUUAAAGACGU
 >1p_error_17 reference=AB100473 amplicon=660..951 errors=57%C
 GUGCCAGCAGCCGCGGUAAUACGUAGGGAGCAAGCGUUGUCCGGAUUUACUGGGUGCAAAGGGCGUGUAGGCGGGAAGGCAGGUCAGAUGUGAAAUCUAU
->1p_error_18 reference=FJ802352 amplicon=495..786 errors=16%A
-GUGCCAGCAGCCGCGAUAAUACGAAGGGGGCUAGCGUUGCUCGGAAUCACUGGGCGUAAAGCGCGCGUAGGCGGCUUUCUAAGUCAGGGGUGAAAUCCCG
 >1p_error_19 reference=GQ138466 amplicon=520..812 description="Bacteria;Firmicutes;Clostridia;Clostridiales;uncultured
 GUGCCAGCAGCCGCGGUAAUACGUAGGGGGCGAGCGUUGUCCGGAAUGACUGGGCGUAAAGGGUGUGUAGGCGGUUUAGCAAGUUAGAUGUGAAAUACCC
 >1p_error_20 reference=EU857742 amplicon=514..805 errors=18%G
 GUGCCAGCAGCCGCGGUGAUACGUAAGGGGCGAGCGUUGUUCGGAAUUAUUGGGCGUAAAGGGUACGUAGGCGGAUUAACAGGCAUUAAGAUAAAGCCAA
->1p_error_21 reference=HQ588409 amplicon=540..831 errors=90%G
-GUGCCAGCAGCCGCGGUAAUACAUAGGGGGCAAGCGUUGUCCGGAAUUAUUGGGCGUAAAGAGUAUGUAGGCGGUUUAUUAAGUCGGUAGGUGAAAGGCU
 >1p_error_22 reference=EU488153 amplicon=481..771 errors=96%C
 GUGCCAGCAGCCGCGGUAACACAUAGAGGACGAGCGUUAUCCGGAUUUACUGGGCGUAAAGAGCGUUGAGGCGGUUCCGUAAGUUGGGCGUUAAACCUCC