Mercurial > repos > rnateam > splitfasta
comparison splitfasta.xml @ 0:bc25ba9d9fcf draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/hacked/splitFasta commit fcd6ef7e59971abd6b6a3a5401f92bcdef6ef76c
| author | rnateam |
|---|---|
| date | Sun, 05 Jul 2015 08:37:52 -0400 |
| parents | |
| children | 279e2625de3a |
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| -1:000000000000 | 0:bc25ba9d9fcf |
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| 1 <tool id="rbc_splitfasta" name="SplitFasta" version="0.1.0"> | |
| 2 <requirements> | |
| 3 </requirements> | |
| 4 <stdio> | |
| 5 <exit_code range="1:" /> | |
| 6 </stdio> | |
| 7 | |
| 8 <command interpreter="python"> | |
| 9 <![CDATA[ | |
| 10 splitFasta.py $inputFile; echo 'blah' > blah | |
| 11 ]]></command> | |
| 12 <inputs> | |
| 13 <param name="inputFile" type="data" format="txt" label="Fasta file to split"/> | |
| 14 </inputs> | |
| 15 <outputs> | |
| 16 <collection type="list"> | |
| 17 <discover_datasets pattern="(?P<designation>.*)" directory="splits" visible="false"/> | |
| 18 </collection> | |
| 19 </outputs> | |
| 20 <help><![CDATA[ | |
| 21 Takes an input file and writes each consecutive two lines to a separate file, in a dataset collection. | |
| 22 ]]></help> | |
| 23 </tool> |