Mercurial > repos > rnateam > viennarna_kinfold

annotate test-data/Anolis_caro_chrUn_GL343207.trna3_AlaAGC_ss.ps @ 7:ef720d386200 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
author rnateam
date Wed, 20 Dec 2017 08:35:35 -0500
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
7
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
1 %!PS-Adobe-3.0 EPSF-3.0
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
2 %%Creator: ViennaRNA-2.2.10
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
3 %%CreationDate: Tue Dec 19 19:42:58 2017
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
4 %%Title: RNA Secondary Structure Plot
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
5 %%BoundingBox: 66 210 518 662
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
6 %%DocumentFonts: Helvetica
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
7 %%Pages: 1
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
8 %%EndComments
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
9
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
10 %Options:
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
11 % to switch off outline pairs of sequence comment or
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
12 % delete the appropriate line near the end of the file
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
13
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
14 %%BeginProlog
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
15 /RNAplot 100 dict def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
16 RNAplot begin
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
17 /fsize 14 def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
18 /outlinecolor {0.2 setgray} bind def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
19 /paircolor {0.2 setgray} bind def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
20 /seqcolor {0 setgray} bind def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
21 /cshow { dup stringwidth pop -2 div fsize -3 div rmoveto show} bind def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
22 /min { 2 copy gt { exch } if pop } bind def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
23 /max { 2 copy lt { exch } if pop } bind def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
24 /arccoords { % i j arccoords
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
25 % puts optimal x1 y1 x2 y2 coordinates used in bezier curves from i to j
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
26 % onto the stack
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
27 dup 3 -1 roll dup 4 -1 roll lt dup dup 5 2 roll {exch} if
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
28 dup 3 -1 roll dup 3 -1 roll exch sub 1 sub dup
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
29 4 -2 roll 5 -1 roll {exch} if 4 2 roll
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
30 sequence length dup 2 div exch 3 1 roll lt
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
31 {exch 5 -1 roll pop 4 -2 roll exch 4 2 roll}
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
32 { 4 2 roll 5 -1 roll dup 6 1 roll {exch} if
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
33 4 -2 roll exch pop dup 3 -1 roll dup 4 1 roll
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
34 exch add 4 -1 roll dup 5 1 roll sub 1 sub
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
35 5 -1 roll not {4 -2 roll exch 4 2 roll} if
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
36 }ifelse
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
37 % compute the scalingfactor and prepare (1-sf) and sf*r
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
38 2 mul exch cpr 3 1 roll div dup
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
39 3 -1 roll mul exch 1 exch sub exch
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
40 % compute the coordinates
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
41 3 -1 roll 1 sub coor exch get aload pop % get coord for i
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
42 4 -1 roll dup 5 1 roll mul 3 -1 roll dup 4 1 roll add exch % calculate y1
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
43 4 -1 roll dup 5 1 roll mul 3 -1 roll dup 4 1 roll add exch % calculate x1
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
44 5 -1 roll 1 sub coor exch get aload pop % get coord for j
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
45 % duplicate j coord
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
46 dup 3 -1 roll dup 4 1 roll exch 8 2 roll
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
47 6 -1 roll dup 7 1 roll mul 5 -1 roll dup 6 1 roll add exch % calculate y2
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
48 6 -1 roll mul 5 -1 roll add exch % calculate x2
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
49 6 -2 roll % reorder
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
50 } bind def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
51 /drawoutline {
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
52 gsave outlinecolor newpath
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
53 coor 0 get aload pop 0.8 0 360 arc % draw 5' circle of 1st sequence
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
54 currentdict /cutpoint known % check if cutpoint is defined
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
55 {coor 0 cutpoint getinterval
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
56 {aload pop lineto} forall % draw outline of 1st sequence
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
57 coor cutpoint 1 add get aload pop
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
58 2 copy moveto 0.8 0 360 arc % draw 5' circle of 2nd sequence
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
59 coor cutpoint 1 add coor length cutpoint 1 add sub getinterval
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
60 {aload pop lineto} forall} % draw outline of 2nd sequence
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
61 {coor {aload pop lineto} forall} % draw outline as a whole
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
62 ifelse
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
63 stroke grestore
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
64 } bind def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
65 /drawpairs {
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
66 paircolor
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
67 0.7 setlinewidth
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
68 [9 3.01] 9 setdash
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
69 newpath
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
70 pairs {aload pop
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
71 currentdict (cpr) known
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
72 { exch dup
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
73 coor exch 1 sub get aload pop moveto
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
74 exch arccoords curveto
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
75 }
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
76 { coor exch 1 sub get aload pop moveto
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
77 coor exch 1 sub get aload pop lineto
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
78 }ifelse
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
79 } forall
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
80 stroke
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
81 } bind def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
82 % draw bases
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
83 /drawbases {
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
84 [] 0 setdash
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
85 seqcolor
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
86 0
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
87 coor {
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
88 aload pop moveto
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
89 dup sequence exch 1 getinterval cshow
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
90 1 add
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
91 } forall
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
92 pop
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
93 } bind def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
94
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
95 /init {
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
96 /Helvetica findfont fsize scalefont setfont
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
97 1 setlinejoin
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
98 1 setlinecap
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
99 0.8 setlinewidth
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
100 72 216 translate
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
101 % find the coordinate range
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
102 /xmax -1000 def /xmin 10000 def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
103 /ymax -1000 def /ymin 10000 def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
104 coor {
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
105 aload pop
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
106 dup ymin lt {dup /ymin exch def} if
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
107 dup ymax gt {/ymax exch def} {pop} ifelse
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
108 dup xmin lt {dup /xmin exch def} if
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
109 dup xmax gt {/xmax exch def} {pop} ifelse
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
110 } forall
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
111 /size {xmax xmin sub ymax ymin sub max} bind def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
112 72 6 mul size div dup scale
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
113 size xmin sub xmax sub 2 div size ymin sub ymax sub 2 div
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
114 translate
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
115 } bind def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
116 end
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
117 %%EndProlog
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
118 RNAplot begin
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
119 % data start here
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
120 /sequence (\
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
121 GGGGAAUUAGCUCAAAUGGUAGAGCGCUCGCUUAGCAUGCGAGAGGUAGCGGGAUUGAUGCCCGCAUUCUCCA\
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
122 ) def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
123 /coor [
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
124 [111.04756165 225.82804871]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
125 [110.41094971 210.84155273]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
126 [109.77433014 195.85507202]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
127 [109.13771057 180.86859131]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
128 [108.50109100 165.88211060]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
129 [107.86447144 150.89561462]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
130 [107.22785950 135.90913391]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
131 [90.28739166 133.48460388]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
132 [77.11851501 123.91786957]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
133 [70.32070923 110.05319977]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
134 [55.37474823 111.32528687]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
135 [40.42878342 112.59737396]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
136 [25.48282242 113.86946106]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
137 [17.57515907 127.22043610]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
138 [3.31690264 133.34266663]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
139 [-11.80935574 129.88204956]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
140 [-21.98726082 118.16923523]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
141 [-23.30319977 102.70806122]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
142 [-15.25116920 89.44365692]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
143 [-0.92733771 83.47645569]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
144 [14.16048908 87.10096741]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
145 [24.21073341 98.92350006]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
146 [39.15669632 97.65141296]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
147 [54.10265732 96.37932587]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
148 [69.04862213 95.10723114]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
149 [75.20735168 80.83619690]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
150 [87.46604156 71.28019714]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
151 [84.93103027 56.49596024]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
152 [82.39601898 41.71172333]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
153 [79.86100006 26.92748451]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
154 [77.32598877 12.14324570]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
155 [63.73017883 4.41744947]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
156 [58.32971573 -10.25800610]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
157 [63.67453384 -24.95381927]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
158 [77.24097443 -32.73107910]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
159 [92.62337494 -29.91759682]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
160 [102.55863953 -17.84181786]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
161 [102.35564423 -2.20555139]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
162 [92.11022949 9.60823345]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
163 [94.64524078 24.39247131]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
164 [97.18025208 39.17671204]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
165 [99.71526337 53.96094894]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
166 [102.25028229 68.74518585]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
167 [111.61898041 69.95008087]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
168 [120.45154572 73.97383881]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
169 [127.89853668 80.59681702]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
170 [133.19635010 89.34370422]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
171 [135.74378967 99.51597595]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
172 [135.16680908 110.24712372]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
173 [150.04531860 112.15238953]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
174 [164.92382812 114.05766296]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
175 [179.80232239 115.96292877]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
176 [194.68083191 117.86819458]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
177 [206.04914856 107.13062286]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
178 [221.66270447 106.26418304]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
179 [234.14927673 115.67798615]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
180 [237.61306763 130.92712402]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
181 [230.41859436 144.81141663]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
182 [215.96286011 150.77513123]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
183 [201.07142639 146.00236511]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
184 [192.77557373 132.74670410]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
185 [177.89706421 130.84143066]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
186 [163.01855469 128.93617249]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
187 [148.14004517 127.03089905]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
188 [133.26153564 125.12563324]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
189 [122.21434021 135.27252197]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
190 [122.85095978 150.25900269]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
191 [123.48757935 165.24548340]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
192 [124.12419128 180.23197937]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
193 [124.76081085 195.21846008]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
194 [125.39743042 210.20494080]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
195 [126.03404999 225.19142151]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
196 [129.04023743 244.33856201]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
197 ] def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
198 /pairs [
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
199 [1 72]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
200 [2 71]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
201 [3 70]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
202 [4 69]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
203 [5 68]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
204 [6 67]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
205 [7 66]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
206 [10 25]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
207 [11 24]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
208 [12 23]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
209 [13 22]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
210 [27 43]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
211 [28 42]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
212 [29 41]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
213 [30 40]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
214 [31 39]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
215 [49 65]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
216 [50 64]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
217 [51 63]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
218 [52 62]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
219 [53 61]
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
220 ] def
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
221
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
222 init
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
223
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
224 % switch off outline pairs or bases by removing these lines
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
225 drawoutline
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
226 drawpairs
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
227 drawbases
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
228 % show it
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
229 showpage
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
230 end
ef720d386200 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit 36681a08c6e44c663169caaefd964781c43d0d29
rnateam
parents:
diff changeset
231 %%EOF