view sift_web/sift_web.xml @ 5:697e66764209 draft default tip

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author saket-choudhary
date Tue, 07 Oct 2014 19:19:11 -0400
parents 19590303d460
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<tool id="sift_web" name="SIFTWeb">
    <description>SIFT/Provean web service</description>
    <requirements>
        <requirement type="package" version="2.2.1">requests</requirement>
        <requirement type="package" version="4.1.0">beautifulsoup4</requirement>
        <requirement type="python-module">requests</requirement>
        <requirement type="python-package">bs4</requirement>
    </requirements>
    <command interpreter="python">
        sift_web.py --input $input --output1 $output1 --output2 $output2 --output3 $output3
    </command>
    <inputs>
        <param name="input" format="txt" type="data" label="Input Variants"/>
    </inputs>
    <outputs>
        <data name="output1" format="tabular" label="${tool.name} on ${on_string}: Full Output"/>
        <data name="output2" format="tabular" label="${tool.name} on ${on_string}: Condensed Output"/>
        <data name="output3" format="tabular" label="${tool.name} on ${on_string}: Summary table"/>
    </outputs>
    <tests>
        <test>
            <param name="input" value="sift_input.txt"/>
            <output name="output1" file="sift_output_full.tsv"/>
            <output name="output2" file="sift_output_condensed.tsv"/>
            <output name="output3" file="sift_output_summary.tsv"/>
        </test>
    </tests>
</tool>