2
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1 <tool id="sift_web" name="SIFTWeb">
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2 <description>SIFT/Provean web service</description>
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3 <requirements>
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4 <requirement type="package" version="2.2.1">requests</requirement>
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5 <requirement type="package" version="4.1.0">beautifulsoup4</requirement>
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6 <requirement type="python-module">requests</requirement>
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7 <requirement type="python-package">bs4</requirement>
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8 </requirements>
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9 <command interpreter="python">
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10 sift_web.py --input $input --output1 $output1 --output2 $output2 --output3 $output3
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11 </command>
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12 <inputs>
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13 <param name="input" format="txt" type="data" label="Input Variants"/>
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14 </inputs>
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15 <outputs>
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5
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16 <data name="output1" format="tabular" label="${tool.name} on ${on_string}: Full Output"/>
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17 <data name="output2" format="tabular" label="${tool.name} on ${on_string}: Condensed Output"/>
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18 <data name="output3" format="tabular" label="${tool.name} on ${on_string}: Summary table"/>
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2
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19 </outputs>
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5
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20 <tests>
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21 <test>
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22 <param name="input" value="sift_input.txt"/>
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23 <output name="output1" file="sift_output_full.tsv"/>
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24 <output name="output2" file="sift_output_condensed.tsv"/>
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25 <output name="output3" file="sift_output_summary.tsv"/>
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26 </test>
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27 </tests>
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2
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28 </tool>
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29
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