Mercurial > repos > saskia-hiltemann > annovar
annotate tools/tool_dependencies.xml @ 6:a3b16fd125c3 draft
added GoNL download link
author | saskia-hiltemann |
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date | Thu, 01 Oct 2015 04:47:19 -0400 |
parents | 4600be69b96f |
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4600be69b96f
Added databases 1000g2015aug, SPIDEX, avsnp138, avsnp142, exac03
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1 <?xml version="1.0"?> |
4600be69b96f
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2 <tool_dependency> |
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3 <package name="cgatools" version="1.7"> |
4600be69b96f
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4 <install version="1.0"> |
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5 <actions> |
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6 <action type="download_by_url">http://sourceforge.net/projects/cgatools/files/1.7.1/cgatools-1.7.1.5-linux_binary-x86_64.tar.gz</action> |
4600be69b96f
Added databases 1000g2015aug, SPIDEX, avsnp138, avsnp142, exac03
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7 <action type="shell_command"> chmod a+x bin/cgatools</action> |
4600be69b96f
Added databases 1000g2015aug, SPIDEX, avsnp138, avsnp142, exac03
saskia-hiltemann
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8 <action type="move_file"> |
4600be69b96f
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9 <source>bin/cgatools</source> |
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10 <destination>$INSTALL_DIR/bin</destination> |
4600be69b96f
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11 </action> |
4600be69b96f
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12 <action type="set_environment"> |
4600be69b96f
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13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> |
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14 <environment_variable name="PATH" action="prepend_to">$REPOSITORY_INSTALL_DIR</environment_variable> |
4600be69b96f
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15 </action> |
4600be69b96f
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16 </actions> |
4600be69b96f
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17 </install> |
4600be69b96f
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18 <readme> |
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19 Downloads and installs the cgatools binary. |
4600be69b96f
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20 </readme> |
4600be69b96f
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21 </package> |
4600be69b96f
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22 </tool_dependency> |
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23 |