Mercurial > repos > scottx611x > data_manager_fetch_gene_annotation
comparison data_manager_gene_annotation/data_manager/gene_annotation_fetcher.xml @ 22:b47ce1c4373e draft
planemo upload
author | scottx611x |
---|---|
date | Thu, 23 Jun 2016 15:11:30 -0400 |
parents | 9f718726ed86 |
children | d27c122c2424 |
comparison
equal
deleted
inserted
replaced
21:096657afd137 | 22:b47ce1c4373e |
---|---|
14 --name "${database_name}" | 14 --name "${database_name}" |
15 #end if | 15 #end if |
16 ]]> | 16 ]]> |
17 </command> | 17 </command> |
18 <inputs> | 18 <inputs> |
19 <param | 19 <param help="Enter a unique identifier, or leave blank for an auto-generated uuid" label="Name for this database" name="database_name" type="text" optional="True" /> |
20 help="Enter a unique identifier, or leave blank for an auto-generated uuid" label="Name for this database" name="database_name" type="text" optional="True" /> | |
21 <param label="Enter URL for gene annotation files" name="gene_annotation_url" type="text" optional="False"/> | 20 <param label="Enter URL for gene annotation files" name="gene_annotation_url" type="text" optional="False"/> |
22 </inputs> | 21 </inputs> |
23 <outputs> | 22 <outputs> |
24 <data format="data_manager_json" name="out_file" /> | 23 <data format="data_manager_json" name="out_file" /> |
25 </outputs> | 24 </outputs> |
25 <tests> | |
26 <test> | |
27 <param name="database_name" value="cool_name"/> | |
28 <param name="gene_annotation_url" value="http://www.scott-ouellette.com/gene_annotations/chr1-hg19_genes.gtf"/> | |
29 <output name="out_file" file="chr1-hg19_genes.gtf.data_manager_json"/> | |
30 </test> | |
31 </tests> | |
26 </tool> | 32 </tool> |