Mercurial > repos > scottx611x > data_manager_fetch_gene_annotation

diff data_manager_gene_annotation/data_manager/gene_annotation_fetcher.xml @ 22:b47ce1c4373e draft

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planemo upload
author scottx611x
date Thu, 23 Jun 2016 15:11:30 -0400
parents 9f718726ed86
children d27c122c2424
line wrap: on
line diff
--- a/data_manager_gene_annotation/data_manager/gene_annotation_fetcher.xml	Thu Jun 23 14:25:15 2016 -0400
+++ b/data_manager_gene_annotation/data_manager/gene_annotation_fetcher.xml	Thu Jun 23 15:11:30 2016 -0400
@@ -16,11 +16,17 @@
     ]]>
     </command>
     <inputs>
-        <param
-                help="Enter a unique identifier, or leave blank for an auto-generated uuid" label="Name for this database" name="database_name" type="text" optional="True" />
+        <param help="Enter a unique identifier, or leave blank for an auto-generated uuid" label="Name for this database" name="database_name" type="text" optional="True" />
         <param label="Enter URL for gene annotation files" name="gene_annotation_url" type="text" optional="False"/>
     </inputs>
     <outputs>
         <data format="data_manager_json" name="out_file" />
     </outputs>
+    <tests>
+        <test>
+            <param name="database_name" value="cool_name"/>
+            <param name="gene_annotation_url" value="http://www.scott-ouellette.com/gene_annotations/chr1-hg19_genes.gtf"/>
+            <output name="out_file" file="chr1-hg19_genes.gtf.data_manager_json"/>
+        </test>
+    </tests>
 </tool>