Mercurial > repos > scottx611x > data_manager_fetch_gene_annotation
diff data_manager_gene_annotation/data_manager/gene_annotation_fetcher.xml @ 22:b47ce1c4373e draft
planemo upload
author | scottx611x |
---|---|
date | Thu, 23 Jun 2016 15:11:30 -0400 |
parents | 9f718726ed86 |
children | d27c122c2424 |
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--- a/data_manager_gene_annotation/data_manager/gene_annotation_fetcher.xml Thu Jun 23 14:25:15 2016 -0400 +++ b/data_manager_gene_annotation/data_manager/gene_annotation_fetcher.xml Thu Jun 23 15:11:30 2016 -0400 @@ -16,11 +16,17 @@ ]]> </command> <inputs> - <param - help="Enter a unique identifier, or leave blank for an auto-generated uuid" label="Name for this database" name="database_name" type="text" optional="True" /> + <param help="Enter a unique identifier, or leave blank for an auto-generated uuid" label="Name for this database" name="database_name" type="text" optional="True" /> <param label="Enter URL for gene annotation files" name="gene_annotation_url" type="text" optional="False"/> </inputs> <outputs> <data format="data_manager_json" name="out_file" /> </outputs> + <tests> + <test> + <param name="database_name" value="cool_name"/> + <param name="gene_annotation_url" value="http://www.scott-ouellette.com/gene_annotations/chr1-hg19_genes.gtf"/> + <output name="out_file" file="chr1-hg19_genes.gtf.data_manager_json"/> + </test> + </tests> </tool>